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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g117940.3.1
CDS Infomation

U2 small nuclear ribonucleoprotein A (AHRD V3.3 *** AT1G09760.1),Pfam:PF14580
Sequence

ATGGTGAGGTTAACGGCGGACCTGATATGGAAAAGCCCTCATTTCTTCAATGCCATACGC
GAACGCGAGTTAGATCTTCGAGGTAATAAGATTCCGGTCATTGAGAACTTAGGTGCTACC
GAGGATCAGTTTGACACGATTGATTTATCTGATAATGAGATTGTTAAACTGGAGAATTTT
CCATATCTGAATCGACTTGGAACTTTACTAATGAACAACAATAGAATTACGCGTATCAAC
CCTAACATTGGAGAGTTTCTGCCAAAATTGCATACTTTGATTATTACTAGCAACAGACTT
ACGAATTTGGTTGAAATTGACCCGCTTGCATCTCTCCCGAAGCTGAAGTTTCTTAGTCTT
CTTGAGAACAATATCACAAAGAGACCAAATTATCGCCTTTATGTCATTCACAAGTTGAAG
TCCTTGCGTTTGTTGGATTTCAGGAAAGTCAAACAAAAGGAGAGATTGGAAGCAAGTAAA
TTATTTGCATCACAAGAAGCTGTAGAGCAGGTCAAAAAGGAATCAGTGAAGACTGTACCT
GTTGAGGTTGCGGCACCTGCTGAGGAACCAAAGGAAGCTCAAGCATCTAAGCCAGTTGCT
CCTACACCTGAGCAAATAATAGCAATTAAGGCTGCCATTGTGAATTCCCAAACTCTTGAG
GAGGTGGCTAGACTTGAACAGGCATTGAAGTCGGGCCAGCTTCCTGCAGATCTAAATATT
GGTGATCATGATGTTACTGCTAAAAAAGAAGACGCCAAAGAAGACAAGATGGTTACAGAT
AGCGATGATAAAGCTAACAAGGTGGAGGAAAATGTACCTGAACAGACACCTGATGGTCCT
ACAGATATGGAGCAGGAGTAG

Peptide Sequence

PEP ID

Solyc03g117940.3.1
PEP Infomation

U2 small nuclear ribonucleoprotein A (AHRD V3.3 *** AT1G09760.1),Pfam:PF14580
Sequence

MVRLTADLIWKSPHFFNAIRERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENF
PYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEIDPLASLPKLKFLSL
LENNITKRPNYRLYVIHKLKSLRLLDFRKVKQKERLEASKLFASQEAVEQVKKESVKTVP
VEVAAPAEEPKEAQASKPVAPTPEQIIAIKAAIVNSQTLEEVARLEQALKSGQLPADLNI
GDHDVTAKKEDAKEDKMVTDSDDKANKVEENVPEQTPDGPTDMEQE*

Transcript Sequence

Transcript ID

Solyc03g117940.3.1
Transcript Infomation

U2 small nuclear ribonucleoprotein A (AHRD V3.3 *** AT1G09760.1),Pfam:PF14580
Sequence

GGGCTTTCATAAACCTTTATGCACTTTGGGGTTTCTCTTGTATCGGCTACTAAGAGCTGC
AAAAGAGAAGAAGTGACACAAAAATGGTGAGGTTAACGGCGGACCTGATATGGAAAAGCC
CTCATTTCTTCAATGCCATACGCGAACGCGAGTTAGATCTTCGAGGTAATAAGATTCCGG
TCATTGAGAACTTAGGTGCTACCGAGGATCAGTTTGACACGATTGATTTATCTGATAATG
AGATTGTTAAACTGGAGAATTTTCCATATCTGAATCGACTTGGAACTTTACTAATGAACA
ACAATAGAATTACGCGTATCAACCCTAACATTGGAGAGTTTCTGCCAAAATTGCATACTT
TGATTATTACTAGCAACAGACTTACGAATTTGGTTGAAATTGACCCGCTTGCATCTCTCC
CGAAGCTGAAGTTTCTTAGTCTTCTTGAGAACAATATCACAAAGAGACCAAATTATCGCC
TTTATGTCATTCACAAGTTGAAGTCCTTGCGTTTGTTGGATTTCAGGAAAGTCAAACAAA
AGGAGAGATTGGAAGCAAGTAAATTATTTGCATCACAAGAAGCTGTAGAGCAGGTCAAAA
AGGAATCAGTGAAGACTGTACCTGTTGAGGTTGCGGCACCTGCTGAGGAACCAAAGGAAG
CTCAAGCATCTAAGCCAGTTGCTCCTACACCTGAGCAAATAATAGCAATTAAGGCTGCCA
TTGTGAATTCCCAAACTCTTGAGGAGGTGGCTAGACTTGAACAGGCATTGAAGTCGGGCC
AGCTTCCTGCAGATCTAAATATTGGTGATCATGATGTTACTGCTAAAAAAGAAGACGCCA
AAGAAGACAAGATGGTTACAGATAGCGATGATAAAGCTAACAAGGTGGAGGAAAATGTAC
CTGAACAGACACCTGATGGTCCTACAGATATGGAGCAGGAGTAGATACCCTGGGGGTTAT
CATGTGTAATTGAGTTGGACATTCAAAAGACAGTACGTTCAGTCATGCACCATTATCCGT
GTAGGAGGAGCGCTTCTTTTTGAAGTGAGGGGATTAGTTAATCGATGTAACTGAAGCCAT
TGTATTCTGCTGTGTACTAAGACCTTTTCTTGCATTTTGATTCTAAAAGACTCAAGTAGC
TGCCAAGTTTAGCAAATCGTAGCTTAAAAGCATCAGGTGACAAAAACTGAATTAGTGTGT
GAAAAGTTGTATTAAACAAAAGAAAGAAGTTTGGTAAGCCTTGTCTTTTTATTTATTCTC
TTACATGTGATGAACTGAATGGAAGTCTTTGAATAGCTGCTGACTTTATCAAATCGTAGC
TTGAAACATG