Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g117675.1.1
CDS Infomation

ATP-dependent DNA helicase (AHRD V3.3 *** AT2G24100.1)
Sequence

ATGGTTCAATTGATGAGAACAACCATGGAAGAGTCGCCGGAGTTGCAGTGGCAAAAAGGG
AAGAACGCGGCGGTGAAGCTCGAGTTTGAAGATGCTTTAGATGAAGCATACGGTCCACTC
AGCAAGCGATCTAAACTTTCTTCTTCTTCTCTACAACAGCAATTGGTTGTAGAAGCTGAT
GGTTTTCCAGTACCGCCTTCGCAGTATAACCCGCTTGATGAGCCCAGTCCGTTAGGTTTG
AGGCTAAGGAAGAGTCCATCACTGTTGGATTTGATCCAGATGAAGCTTTCTCAGGGGAAC
AACGCCAAGGTGGGAAATCAAGGGAAGAAGGAGCAGAAGGGGAACACTGGAACAATTGAG
AAACTTAAGGCTTCGAACTTTCCTGCCACAGTTCTAAGAATTGGGAGCTGGGAGTACAAG
TCAAGATATGAAGGGGATCTAGTGGCAAAATGTTACTTTGCGAAGCATAAACTTGTTTGG
GAAGTCCTTGACGGTGGTCTCAAGAATAAGATCGAAATCCAGTGGTCAGATATTATGGGT
TTGAAGGCAAATTACCCTGACGATGGACCTGGAACTTTAGATGTAGTGCTTTCAAGACAA
CCTCTTTTCTTCAGGGAGACGAATCCACAGCCTAGGAAGCACACTCTTTGGCAAGCAACA
TCTGATTTTACTGGAGGACAAGCTAGCATGCACAAGCGACATTACTTGCAGATTCCACAA
GGCTTGTTAGGAAAGCATTTTGAAAAGCTTATTCAGTGTGATCCCCGTCTTAATTTCCTA
AGTCAACAACCAGAGATTATACTTGATTCTCCACATTTCGAAACCAGAATTTCAGTATTT
GAAGACCCAAACGTGTGCGAGTCGGAATTTAATCTGAATAATGAGAGAAGTCCTCCCTTT
CTTAACTTGCATGGTGCCGCTTCGCCTTCAGGAGCTCATTGTTCTTCAACAAATGGAGAG
CAAGACTTTGTTGTTAGTAGACGATTGGAAAACATTCGTCCAGAAACACCTTCACCAAGC
TCAGTGATGGATACAAGGGCGATTCAAGATGTCAGTAGAGATATGGAGCAGTTGAAAGGC
CTTGGCAACCTAGATCAGATCAGAGTGCCTGGTCTTCATCCTTCCATGTCAATGAAAGAT
TTAGTGAGCCACTTTGAACAACGTTTTTCTGAGCAGGGAACGTCTGAAGTTATAAGCTTG
TCCAGTGACGAACTCCAAAGCTTGGAGATTCTCGAAGAGATCTCGAGGTGCTTGTTTAGT
GACACTCAAAATATGCCAGCATCAGATGAGAAATCCCTCATGACAAGGGTCAATTCTCTG
TGCTGTCTTCTTCAGAAGGATCCCGCAACAGCCCATAAGAGTGAGAACTATGGTGGTGTT
GCAGTTGGAGGTAAGAGAACTGATGAACTGATCAGTTTCTTTCCCGGAGCAACATGTGGA
AAGAAGGTTGAAGATCCTTCCACATCAGAGGACAAATCAAATGATCCAGCTCCTTCAATG
TCGAGAAAAGACTCGATAGGGGATCTGTTGCTGAATCTGCCAAGAATCGCGTCGTTGCCT
CAGTTTCTCTTCAATATCTATGAAGATTCCGACCGCCCAGCTAGATAG

Peptide Sequence

PEP ID

Solyc03g117675.1.1
PEP Infomation

ATP-dependent DNA helicase (AHRD V3.3 *** AT2G24100.1)
Sequence

MVQLMRTTMEESPELQWQKGKNAAVKLEFEDALDEAYGPLSKRSKLSSSSLQQQLVVEAD
GFPVPPSQYNPLDEPSPLGLRLRKSPSLLDLIQMKLSQGNNAKVGNQGKKEQKGNTGTIE
KLKASNFPATVLRIGSWEYKSRYEGDLVAKCYFAKHKLVWEVLDGGLKNKIEIQWSDIMG
LKANYPDDGPGTLDVVLSRQPLFFRETNPQPRKHTLWQATSDFTGGQASMHKRHYLQIPQ
GLLGKHFEKLIQCDPRLNFLSQQPEIILDSPHFETRISVFEDPNVCESEFNLNNERSPPF
LNLHGAASPSGAHCSSTNGEQDFVVSRRLENIRPETPSPSSVMDTRAIQDVSRDMEQLKG
LGNLDQIRVPGLHPSMSMKDLVSHFEQRFSEQGTSEVISLSSDELQSLEILEEISRCLFS
DTQNMPASDEKSLMTRVNSLCCLLQKDPATAHKSENYGGVAVGGKRTDELISFFPGATCG
KKVEDPSTSEDKSNDPAPSMSRKDSIGDLLLNLPRIASLPQFLFNIYEDSDRPAR*

Transcript Sequence

Transcript ID

Solyc03g117675.1.1
Transcript Infomation

ATP-dependent DNA helicase (AHRD V3.3 *** AT2G24100.1)
Sequence

TAAGGAAGTAGTAGTAAAAACGAATATTGATTTCTCCTCTTTCTCTTGTTCATATTCATA
TACAAGCAGCAAAGCAAATAGATATTTTTGTTTTTGACTACTTCTTCGGTTTTCAAGTAT
GGTTCAATTGATGAGAACAACCATGGAAGAGTCGCCGGAGTTGCAGTGGCAAAAAGGGAA
GAACGCGGCGGTGAAGCTCGAGTTTGAAGATGCTTTAGATGAAGCATACGGTCCACTCAG
CAAGCGATCTAAACTTTCTTCTTCTTCTCTACAACAGCAATTGGTTGTAGAAGCTGATGG
TTTTCCAGTACCGCCTTCGCAGTATAACCCGCTTGATGAGCCCAGTCCGTTAGGTTTGAG
GCTAAGGAAGAGTCCATCACTGTTGGATTTGATCCAGATGAAGCTTTCTCAGGGGAACAA
CGCCAAGGTGGGAAATCAAGGGAAGAAGGAGCAGAAGGGGAACACTGGAACAATTGAGAA
ACTTAAGGCTTCGAACTTTCCTGCCACAGTTCTAAGAATTGGGAGCTGGGAGTACAAGTC
AAGATATGAAGGGGATCTAGTGGCAAAATGTTACTTTGCGAAGCATAAACTTGTTTGGGA
AGTCCTTGACGGTGGTCTCAAGAATAAGATCGAAATCCAGTGGTCAGATATTATGGGTTT
GAAGGCAAATTACCCTGACGATGGACCTGGAACTTTAGATGTAGTGCTTTCAAGACAACC
TCTTTTCTTCAGGGAGACGAATCCACAGCCTAGGAAGCACACTCTTTGGCAAGCAACATC
TGATTTTACTGGAGGACAAGCTAGCATGCACAAGCGACATTACTTGCAGATTCCACAAGG
CTTGTTAGGAAAGCATTTTGAAAAGCTTATTCAGTGTGATCCCCGTCTTAATTTCCTAAG
TCAACAACCAGAGATTATACTTGATTCTCCACATTTCGAAACCAGAATTTCAGTATTTGA
AGACCCAAACGTGTGCGAGTCGGAATTTAATCTGAATAATGAGAGAAGTCCTCCCTTTCT
TAACTTGCATGGTGCCGCTTCGCCTTCAGGAGCTCATTGTTCTTCAACAAATGGAGAGCA
AGACTTTGTTGTTAGTAGACGATTGGAAAACATTCGTCCAGAAACACCTTCACCAAGCTC
AGTGATGGATACAAGGGCGATTCAAGATGTCAGTAGAGATATGGAGCAGTTGAAAGGCCT
TGGCAACCTAGATCAGATCAGAGTGCCTGGTCTTCATCCTTCCATGTCAATGAAAGATTT
AGTGAGCCACTTTGAACAACGTTTTTCTGAGCAGGGAACGTCTGAAGTTATAAGCTTGTC
CAGTGACGAACTCCAAAGCTTGGAGATTCTCGAAGAGATCTCGAGGTGCTTGTTTAGTGA
CACTCAAAATATGCCAGCATCAGATGAGAAATCCCTCATGACAAGGGTCAATTCTCTGTG
CTGTCTTCTTCAGAAGGATCCCGCAACAGCCCATAAGAGTGAGAACTATGGTGGTGTTGC
AGTTGGAGGTAAGAGAACTGATGAACTGATCAGTTTCTTTCCCGGAGCAACATGTGGAAA
GAAGGTTGAAGATCCTTCCACATCAGAGGACAAATCAAATGATCCAGCTCCTTCAATGTC
GAGAAAAGACTCGATAGGGGATCTGTTGCTGAATCTGCCAAGAATCGCGTCGTTGCCTCA
GTTTCTCTTCAATATCTATGAAGATTCCGACCGCCCAGCTAGATAG