Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g117500.1.1
CDS Infomation

VQ motif-containing protein (AHRD V3.3 *** AT1G80450.1)
Sequence

ATGGCTTCTGATCCGAATTCATCAACACCCAATACCACTTTCGTTCAAGCCGACCCGTCC
AATTTCCGAGCCGTTGTTCAACGACTGACTGGCGCAGCTCAAGATTCGTCTTCGTTGAAG
CTCCCGGTTACTGGGCCTGGACCAGCTGGGCCTCGACGACCGGCTTTCAAGCTGCACGAG
CGGAGGCAGAGTGCGAGGAAGCTCGAGATCATGCTTAACAATGGAGGTAGCTTCGGTGTC
GGCTCACTTTCTCCTTCTTCTTCTTCTCCTTCTTCATCAGCGAGGAAGAGAAGTTTTTTG
ACTTCGCCAATTTCACCATTGGAAATGTTGACACGTGGCAGTCCGAGATCGCCGATGGAG
GAAGAAGAAAAAGCCATTGCTGAAAAAGGATTTTATTTGCATCCAAGTCCACGAACTACT
CCTAGAGGCTCTGAACCTCCCGAACTATTACCTTTATTTCCACTTCAGTCCCCTACTGCC
ACAAATAATTCATCATCATCTACTTAA

Peptide Sequence

PEP ID

Solyc03g117500.1.1
PEP Infomation

VQ motif-containing protein (AHRD V3.3 *** AT1G80450.1)
Sequence

MASDPNSSTPNTTFVQADPSNFRAVVQRLTGAAQDSSSLKLPVTGPGPAGPRRPAFKLHE
RRQSARKLEIMLNNGGSFGVGSLSPSSSSPSSSARKRSFLTSPISPLEMLTRGSPRSPME
EEEKAIAEKGFYLHPSPRTTPRGSEPPELLPLFPLQSPTATNNSSSST*

Transcript Sequence

Transcript ID

Solyc03g117500.1.1
Transcript Infomation

VQ motif-containing protein (AHRD V3.3 *** AT1G80450.1)
Sequence

ATGGCTTCTGATCCGAATTCATCAACACCCAATACCACTTTCGTTCAAGCCGACCCGTCC
AATTTCCGAGCCGTTGTTCAACGACTGACTGGCGCAGCTCAAGATTCGTCTTCGTTGAAG
CTCCCGGTTACTGGGCCTGGACCAGCTGGGCCTCGACGACCGGCTTTCAAGCTGCACGAG
CGGAGGCAGAGTGCGAGGAAGCTCGAGATCATGCTTAACAATGGAGGTAGCTTCGGTGTC
GGCTCACTTTCTCCTTCTTCTTCTTCTCCTTCTTCATCAGCGAGGAAGAGAAGTTTTTTG
ACTTCGCCAATTTCACCATTGGAAATGTTGACACGTGGCAGTCCGAGATCGCCGATGGAG
GAAGAAGAAAAAGCCATTGCTGAAAAAGGATTTTATTTGCATCCAAGTCCACGAACTACT
CCTAGAGGCTCTGAACCTCCCGAACTATTACCTTTATTTCCACTTCAGTCCCCTACTGCC
ACAAATAATTCATCATCATCTACTTAA