Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g117250.3.1
CDS Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

ATGGGAATTCCGAGGTATATCGTAGCTGGCCCATCGGAAATGCTTGCGATCACTGGAAAT
GGCATATCTGAAATACTACTGAAGAAGAAGCATTTCTTATGGCCCCTCCAAAAATGCACC
AGGCTCGACATTTCCCCGGTGAACTATTCGTTCCAGGTTCAAGCTATGAGCGCGGAGAAA
CTCCCTTTCTACCTCCCGGCGGTATTCACAATTGGGCCAAAAGTGTTGGACGAGACGAAT
TATGAGAGCTTGATTAAGTATGCAAAACTTATGTCTAATAGTGACAAGCAGTCAACTCAT
ATACAAGATCTTGTCAAGGGAGTTATCGAAGGGGAAACTCGTGTACTTGCTGCTTCCATG
ACAATGGAACAGATTTTTAAGGGAACAAAGGAATTTAAGCAAGAAGTATTTGATAAAGTG
CAACTTGAATTGAATCAATTTGGGCTTTATATCTATAATGCTAATGTTAAGCAGCTTGTA
GATATTGATGTAGCGGAGGCAAGGATGAAAGGAGAGATAGGTGCAAAGCTAAGAGATGGA
GAAACAAAGCAAAATGCTGCTATGATTGATGCTGAGACATTTATCATATCAACGAAAAGG
CAAGGAGAAGGAAAGAAGGAAGAAGTTAGAGTAAACACTGAAGTTAAAATATTTCAGAAC
CAAAGAGAAGCTGAGGTTGTTGAGGCAACTGCTTTTCTGGCAAAGAAGAAAGCAGGGTGG
TCTCAGACTGCCAGGCTGGCGGAGGTGGAAGCCGAGAAGGCGGTAGCCATAAGAGAAGCA
GAGCTGCAAATGGAAGTGGAGAAAAAGAAAGCTTTTGTTGAGACTGCTAAGCTCAAGGCT
GAGCTTCTCACCAAGGCTACTGTCGAATATGATATTAAGGTGCAAGAGGCAAATTCTGAA
TTATACAAGCGACAGAAAGAAGCAGAAGCTGCACTATTCGAGAGCCAGAAGAAAGCAGAG
GCACAAAAGGCAAATGCAGATGCTGAACTCTATACTCGGCAGCAGGCTGCAAACAGCGAG
CTGTATGCAAAGCAGAAGGAAGCGGAAGGAGTAGCAACGATTGGAAAAGCACAAGCAATT
TACTTAGGATCCATTCTAAAGGAATTGAATCACAATTACACTGCTCTCAGAGACTATTTG
ATGATCAACAACGGTATGTACAAGGAAATCGCCCAACTCAACGCTGAAGCAGTGAACGGT
ATGCAGCCAAAGATTAGCATTTGGTCAGGTGCTAATGGAGGTGAAAGCAATAGTGGCGGC
GAAGGTGGGAGCGGATTGAAGGATGTTGCTGCATTGTACCGTATGATGCCTCCTCTGCTT
GAAACAGTACAGGAACAAACTGGGATGCAGCCTCCTGCTTGGCTTGCAACCTTACCACAC
CACAAATGA

Peptide Sequence

PEP ID

Solyc03g117250.3.1
PEP Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

MGIPRYIVAGPSEMLAITGNGISEILLKKKHFLWPLQKCTRLDISPVNYSFQVQAMSAEK
LPFYLPAVFTIGPKVLDETNYESLIKYAKLMSNSDKQSTHIQDLVKGVIEGETRVLAASM
TMEQIFKGTKEFKQEVFDKVQLELNQFGLYIYNANVKQLVDIDVAEARMKGEIGAKLRDG
ETKQNAAMIDAETFIISTKRQGEGKKEEVRVNTEVKIFQNQREAEVVEATAFLAKKKAGW
SQTARLAEVEAEKAVAIREAELQMEVEKKKAFVETAKLKAELLTKATVEYDIKVQEANSE
LYKRQKEAEAALFESQKKAEAQKANADAELYTRQQAANSELYAKQKEAEGVATIGKAQAI
YLGSILKELNHNYTALRDYLMINNGMYKEIAQLNAEAVNGMQPKISIWSGANGGESNSGG
EGGSGLKDVAALYRMMPPLLETVQEQTGMQPPAWLATLPHHK*

Transcript Sequence

Transcript ID

Solyc03g117250.3.1
Transcript Infomation

SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1)
Sequence

ATGGGAATTCCGAGGTATATCGTAGCTGGCCCATCGGAAATGCTTGCGATCACTGGAAAT
GGCATATCTGAAATACTACTGAAGAAGAAGCATTTCTTATGGCCCCTCCAAAAATGCACC
AGGCTCGACATTTCCCCGGTGAACTATTCGTTCCAGGTTCAAGCTATGAGCGCGGAGAAA
CTCCCTTTCTACCTCCCGGCGGTATTCACAATTGGGCCAAAAGTGTTGGACGAGACGAAT
TATGAGAGCTTGATTAAGTATGCAAAACTTATGTCTAATAGTGACAAGCAGTCAACTCAT
ATACAAGATCTTGTCAAGGGAGTTATCGAAGGGGAAACTCGTGTACTTGCTGCTTCCATG
ACAATGGAACAGATTTTTAAGGGAACAAAGGAATTTAAGCAAGAAGTATTTGATAAAGTG
CAACTTGAATTGAATCAATTTGGGCTTTATATCTATAATGCTAATGTTAAGCAGCTTGTA
GATATTGATGTAGCGGAGGCAAGGATGAAAGGAGAGATAGGTGCAAAGCTAAGAGATGGA
GAAACAAAGCAAAATGCTGCTATGATTGATGCTGAGACATTTATCATATCAACGAAAAGG
CAAGGAGAAGGAAAGAAGGAAGAAGTTAGAGTAAACACTGAAGTTAAAATATTTCAGAAC
CAAAGAGAAGCTGAGGTTGTTGAGGCAACTGCTTTTCTGGCAAAGAAGAAAGCAGGGTGG
TCTCAGACTGCCAGGCTGGCGGAGGTGGAAGCCGAGAAGGCGGTAGCCATAAGAGAAGCA
GAGCTGCAAATGGAAGTGGAGAAAAAGAAAGCTTTTGTTGAGACTGCTAAGCTCAAGGCT
GAGCTTCTCACCAAGGCTACTGTCGAATATGATATTAAGGTGCAAGAGGCAAATTCTGAA
TTATACAAGCGACAGAAAGAAGCAGAAGCTGCACTATTCGAGAGCCAGAAGAAAGCAGAG
GCACAAAAGGCAAATGCAGATGCTGAACTCTATACTCGGCAGCAGGCTGCAAACAGCGAG
CTGTATGCAAAGCAGAAGGAAGCGGAAGGAGTAGCAACGATTGGAAAAGCACAAGCAATT
TACTTAGGATCCATTCTAAAGGAATTGAATCACAATTACACTGCTCTCAGAGACTATTTG
ATGATCAACAACGGTATGTACAAGGAAATCGCCCAACTCAACGCTGAAGCAGTGAACGGT
ATGCAGCCAAAGATTAGCATTTGGTCAGGTGCTAATGGAGGTGAAAGCAATAGTGGCGGC
GAAGGTGGGAGCGGATTGAAGGATGTTGCTGCATTGTACCGTATGATGCCTCCTCTGCTT
GAAACAGTACAGGAACAAACTGGGATGCAGCCTCCTGCTTGGCTTGCAACCTTACCACAC
CACAAATGAAGTGCACATTAGTTAATCTCTAGTTTGCTATGGGATTATTTATGCTTTGCT
TTTCTGGTATTGAATTATAAATTAGTACTACTTTGCATTGTGCTGCTTGGATTGAAGTTG
TTTTTTTCATGTATTTGGAAATAATGTATATCAAGTCATGAATTGGTAAAAGGCTATGGT
AGATAAAAGGCATTTCACCTATCTTTCCCGGATTTTCAACTACCCACGCACGCACCAACA
CATGTACATGTGTATCTTTTATTTACTTTCTT