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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g116870.3.1
CDS Infomation

NAD(P)H dehydrogenase subunit 48 (AHRD V3.3 *** A0A0F7GZU3_9ROSI)
Sequence

ATGGCTGCCTCTACTACTCTACTATCTAACTCCATTTCTCCTTTCTTTGCTAATCCACCT
AATTTTCCTGTAACCCATGTCACAAATGTACCTTTCTTGAACCACAATCCATCTTTTCCC
GCCAGAAAATCAGGGAATTTTTGCCTCAATGCCAAGAAAAAAAATCCATGGCTTGACCCT
TTTGACTATGGTGATGATCCTGAAATGGAATATGGTTCACTTTTTTCTGAAGGGAAACAA
GATGAAGATCCAAGGCCACCTGATAATCCTGATAACCCATATGGATTTCTCAAATTCCCA
ATGGGATACTCTGTTGAGATTGCTTCGTTGGGTTTGAAAATTAGAGGTGATGTTCGGAGA
TGTTGTTGTGTTATTGATGGTGGGGTTTATGAGAATTTGCTGTTCTTTCCAGTAATTCAG
ATGATTAAGGATAGGTACCCTGGTGTTCAAGTGGATATACTTGCAACAGCCAGGGGAAAA
CAGACATTTGAGATGAATAAAAATGTGAGGTGGGCTAATGCCTATGATCTGGATGATGAT
TTTCCTGAACCAGCTGAGTATACGGATATGCTTGGAATTCTTAAGAGTAGGTACTATGAT
ATGATCTTGTCAACCAAACTGGCAGGGATTGGACATGCAGTATTTTTGTTTATGTCGACT
GCTCGTGACAGAGTTAGCTACATTTACCCAAATGTGAATTCTGCAGGAGCAGGATTGTTT
CTGTCAGAAACTTTTACACCAGAAAGCATGAACCTCTCCGAGGGCGGATATCATATGTAC
CGTCAGATGGTTGATTGGTTGGGCAGACCAGCTCGTAAAGTACCTCGACAACCTTTACCC
CCACTTAAAGTTTCAATCTCAAGAAAGGTTAGGGAGGTTGTAGAGGCAAAATATAAGAAT
GTTGGTGCACAGAAAGGCAAATATATTGTGATTCATGGGATTAAATCAGATTCAAAAGCT
TCTATGCAGTCAAGGGGTGATATTGATAGCTTGCTCCCTATTGAGATTTGGGCTGAGATA
GCAGAGGAGATAAGGGGAGTCAAGCCAGTTTTTGTCATTCCACACGAAAAAGAAAGAGAA
AATGTGGAAGATGCAGTTGGTTACGATGCTAGTATAGTGTTCATAACCACCCCTGGACAG
CTTGCTGCTCTTGTTGATGACTCTGCTGGAGTGATAGCTACAAATACAGCTGCGATACAA
CTTGCTCACGCACGTGGAAAACCAAGTATTGGGCTATTCTGCTCTGAGGATAAGGCCAGA
AGTTTTGTTCCCAATGCAGAAGCAAAGAAATGTGCAACTATTTCATCAAATACTGGAAAA
TTGGTTGATATTGATGTTGAAGCTGTGAAGAGTGCTGTTCAAATTTTCACCATGCCCCTA
GCAATCTTCTAA

Peptide Sequence

PEP ID

Solyc03g116870.3.1
PEP Infomation

NAD(P)H dehydrogenase subunit 48 (AHRD V3.3 *** A0A0F7GZU3_9ROSI)
Sequence

MAASTTLLSNSISPFFANPPNFPVTHVTNVPFLNHNPSFPARKSGNFCLNAKKKNPWLDP
FDYGDDPEMEYGSLFSEGKQDEDPRPPDNPDNPYGFLKFPMGYSVEIASLGLKIRGDVRR
CCCVIDGGVYENLLFFPVIQMIKDRYPGVQVDILATARGKQTFEMNKNVRWANAYDLDDD
FPEPAEYTDMLGILKSRYYDMILSTKLAGIGHAVFLFMSTARDRVSYIYPNVNSAGAGLF
LSETFTPESMNLSEGGYHMYRQMVDWLGRPARKVPRQPLPPLKVSISRKVREVVEAKYKN
VGAQKGKYIVIHGIKSDSKASMQSRGDIDSLLPIEIWAEIAEEIRGVKPVFVIPHEKERE
NVEDAVGYDASIVFITTPGQLAALVDDSAGVIATNTAAIQLAHARGKPSIGLFCSEDKAR
SFVPNAEAKKCATISSNTGKLVDIDVEAVKSAVQIFTMPLAIF*

Transcript Sequence

Transcript ID

Solyc03g116870.3.1
Transcript Infomation

NAD(P)H dehydrogenase subunit 48 (AHRD V3.3 *** A0A0F7GZU3_9ROSI)
Sequence

CTATAGTTTTTAGCTATCCCCAAAAAAAGTTGCAGAATTTTATGATAACACTCAAATGGC
TGCCTCTACTACTCTACTATCTAACTCCATTTCTCCTTTCTTTGCTAATCCACCTAATTT
TCCTGTAACCCATGTCACAAATGTACCTTTCTTGAACCACAATCCATCTTTTCCCGCCAG
AAAATCAGGGAATTTTTGCCTCAATGCCAAGAAAAAAAATCCATGGCTTGACCCTTTTGA
CTATGGTGATGATCCTGAAATGGAATATGGTTCACTTTTTTCTGAAGGGAAACAAGATGA
AGATCCAAGGCCACCTGATAATCCTGATAACCCATATGGATTTCTCAAATTCCCAATGGG
ATACTCTGTTGAGATTGCTTCGTTGGGTTTGAAAATTAGAGGTGATGTTCGGAGATGTTG
TTGTGTTATTGATGGTGGGGTTTATGAGAATTTGCTGTTCTTTCCAGTAATTCAGATGAT
TAAGGATAGGTACCCTGGTGTTCAAGTGGATATACTTGCAACAGCCAGGGGAAAACAGAC
ATTTGAGATGAATAAAAATGTGAGGTGGGCTAATGCCTATGATCTGGATGATGATTTTCC
TGAACCAGCTGAGTATACGGATATGCTTGGAATTCTTAAGAGTAGGTACTATGATATGAT
CTTGTCAACCAAACTGGCAGGGATTGGACATGCAGTATTTTTGTTTATGTCGACTGCTCG
TGACAGAGTTAGCTACATTTACCCAAATGTGAATTCTGCAGGAGCAGGATTGTTTCTGTC
AGAAACTTTTACACCAGAAAGCATGAACCTCTCCGAGGGCGGATATCATATGTACCGTCA
GATGGTTGATTGGTTGGGCAGACCAGCTCGTAAAGTACCTCGACAACCTTTACCCCCACT
TAAAGTTTCAATCTCAAGAAAGGTTAGGGAGGTTGTAGAGGCAAAATATAAGAATGTTGG
TGCACAGAAAGGCAAATATATTGTGATTCATGGGATTAAATCAGATTCAAAAGCTTCTAT
GCAGTCAAGGGGTGATATTGATAGCTTGCTCCCTATTGAGATTTGGGCTGAGATAGCAGA
GGAGATAAGGGGAGTCAAGCCAGTTTTTGTCATTCCACACGAAAAAGAAAGAGAAAATGT
GGAAGATGCAGTTGGTTACGATGCTAGTATAGTGTTCATAACCACCCCTGGACAGCTTGC
TGCTCTTGTTGATGACTCTGCTGGAGTGATAGCTACAAATACAGCTGCGATACAACTTGC
TCACGCACGTGGAAAACCAAGTATTGGGCTATTCTGCTCTGAGGATAAGGCCAGAAGTTT
TGTTCCCAATGCAGAAGCAAAGAAATGTGCAACTATTTCATCAAATACTGGAAAATTGGT
TGATATTGATGTTGAAGCTGTGAAGAGTGCTGTTCAAATTTTCACCATGCCCCTAGCAAT
CTTCTAAATATTATACATCCTCCAGTTCTCTTACATATAGTAATTAAGTATTCCTGTAAT
TGTTACTAGTTCCATTTTCTTCTCAATTGTAATTAATAGAAGCGGAAATATATATATTCG
TTCTTTTTTCTCAACAG