Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g116850.3.1
CDS Infomation	cyclic nucleotide gated channel 8 (AHRD V3.3 *** AT1G19780.1)
Sequence	ATGTTTGGTAATTACAAGTCGCAGATTATTGGAGGACAAAAAGAAAAGTTTGTAAGGTTA GAGGACGCAAACTCTGACATATCGTTTAAGTCTGATATGGCTGGAAGGACAAAGTATGGA TTTAATATAGAGGGTCATGCAACCAACCCATCCAAGTCAATAAAACTGGGTGTAAAAAGA GGATCTGAGGGACTAGTGACATTTGGTAGAACACTGAAATCTGGCGTTACCCGAGCAGTT TTTCCAGAAGATTTGAGAGTTTCAGATAAAAGGATATTTGATCCTCAAGACAAGTCTCTC CTGTTCTGGAATAGGCTATTGGTCATATCATGTATTTTGGCAGTATCCATTGATCCTCTA TTTCTCTACCTTCCTGTTTTTAAGGATGAAGGGAAGTGTCTCCACATAGATGAAAGTTTA GCAAAGATAGTAAGTTGGATGCGGACAGCAGTTGATCTCTTTTACCTTATCCGCATGGTT CTCCAATTTCGAACAGCTTTTATTGCTCCATCTTCCCGTGTTTTTGGGCGAGGTGAACTT GTAATAGATCCCAAGCAAATAGCAACCAGATACCTCAGCCGTTACTTTGTAGTGGATTTC TTTTCCATTCTTCCTGCACCGCAGATTGTGATATGGAGATATCTTGGTGGATCAAGAGGT TCGGATGTATTGATTACAAAGACATTATTATCGTACATCATCCTCATTCAATATATTCCT AGATTTTTGCGGTTTATTCCATTAAGTTCGGATTTGAAAAAGACTGCAGGGGTGTTTGCA GAAACTGCTTGGGCTGGTGCTGCATATTATCTGTTGTGGTTTGTTCTAGCTAGTCATATA TTTGGGGCCATATGGTACCTGTTAGCTGTCGAACGCAAAGATACATGTTGGAATGAAGCA TGTACCGAAAATGACCAGTGCAAAGATAAATTATCTTATCTGTATTGTTCACGTGAAGGA AACTTCAATTTGACAGAATGGCAAAACATTGGCAAGAGTGTTCTTGATGAAAAATGTGCT GAGGAGGAGAAATTTTCATATGGAATATATGCAAGAGCTGTAACAACTAATGTTCTTGAC ACTGAAGATTTCGTGATCAAATATTGTTTCTGTTTGTGGTGGGGCTTGCAGAATTTGAGC ACACTTGGTCAGGGGCTTGAGACCAGTACCTATACGAAGGAAAATCTCTTTTCAATAATA TTGGCCATTTCTGGACTCTTACTATTTGCTCTTCTCATTGGAAACATGCAGACCTATCTT CAGTCTCTAACAGTACGACTTGAGGAGATGAGGGTCAAAAGGCGTGACTCAGAGCAGTGG ATGCATCACAGAGTACTTCCTCCTGAGCTAAGGGAGAGAGTTCGACGTTACGATCAGTAC AAATGGTTGGAAACTCGAGGAGTAGATGAAGAGAGTTTGGTGCAAAATCTGCCCAAAGAT CTTAGGAGAGATATTAAGCGGCATCTCTGTCTGAATTTGGTTAGAAGGGTGCCCTTGTTT GAGAACATGGATGAGAGAATGCTTGACGCCATATGTGAGAGATTGAAACCAAGTTTATGC ACCGAAAGAACATATATAGTTAGAGAAGGAGATCCAGTTGGTGAAATGATGTTTATAATC CGTGGTCGCCTAGAAAGTGTAACAACTGATGGAGGGAGAAGTGGATTCTTCAACAGAGGT ATCTTGAAAGAAAATGACTTCTGTGGTGAGGAGCTGCTAACATGGGCATTGGATCCAAAA TCCGGGTCTAACTTGCCGCCATCAACTAGGACAGTCAAGGCTTTGACAGAAGTAGAGGCA TTTGCCTTAGAGGCAGAAGAAGTGAAGTACATTACATCACAGTTCAGGCGGTTGCAGAGT CGACAGGTACAGCACACTTTTAGGTTTTACTCGCAGCAATGGAGAACCTGGGCTGCCAGC TTCATACAAGCTGCATGGCGCCGGCATACAAGGAGGAAAATTGCAGAACTTCGTCAAATT GAGGAAATGGAAGAGGACGGATTTAATGAGAACGATGATGGAGAAACTGAGTTTACTCCA ATGCTGCACAAATCTCTGGAGAGACCATATTAG

Peptide Sequence

PEP ID	Solyc03g116850.3.1
PEP Infomation	cyclic nucleotide gated channel 8 (AHRD V3.3 *** AT1G19780.1)
Sequence	MFGNYKSQIIGGQKEKFVRLEDANSDISFKSDMAGRTKYGFNIEGHATNPSKSIKLGVKR GSEGLVTFGRTLKSGVTRAVFPEDLRVSDKRIFDPQDKSLLFWNRLLVISCILAVSIDPL FLYLPVFKDEGKCLHIDESLAKIVSWMRTAVDLFYLIRMVLQFRTAFIAPSSRVFGRGEL VIDPKQIATRYLSRYFVVDFFSILPAPQIVIWRYLGGSRGSDVLITKTLLSYIILIQYIP RFLRFIPLSSDLKKTAGVFAETAWAGAAYYLLWFVLASHIFGAIWYLLAVERKDTCWNEA CTENDQCKDKLSYLYCSREGNFNLTEWQNIGKSVLDEKCAEEEKFSYGIYARAVTTNVLD TEDFVIKYCFCLWWGLQNLSTLGQGLETSTYTKENLFSIILAISGLLLFALLIGNMQTYL QSLTVRLEEMRVKRRDSEQWMHHRVLPPELRERVRRYDQYKWLETRGVDEESLVQNLPKD LRRDIKRHLCLNLVRRVPLFENMDERMLDAICERLKPSLCTERTYIVREGDPVGEMMFII RGRLESVTTDGGRSGFFNRGILKENDFCGEELLTWALDPKSGSNLPPSTRTVKALTEVEA FALEAEEVKYITSQFRRLQSRQVQHTFRFYSQQWRTWAASFIQAAWRRHTRRKIAELRQI EEMEEDGFNENDDGETEFTPMLHKSLERPY*

Transcript Sequence

Transcript ID	Solyc03g116850.3.1
Transcript Infomation	cyclic nucleotide gated channel 8 (AHRD V3.3 *** AT1G19780.1)
Sequence	ATGTTTGGTAATTACAAGTCGCAGATTATTGGAGGACAAAAAGAAAAGTTTGTAAGGTTA GAGGACGCAAACTCTGACATATCGTTTAAGTCTGATATGGCTGGAAGGACAAAGTATGGA TTTAATATAGAGGGTCATGCAACCAACCCATCCAAGTCAATAAAACTGGGTGTAAAAAGA GGATCTGAGGGACTAGTGACATTTGGTAGAACACTGAAATCTGGCGTTACCCGAGCAGTT TTTCCAGAAGATTTGAGAGTTTCAGATAAAAGGATATTTGATCCTCAAGACAAGTCTCTC CTGTTCTGGAATAGGCTATTGGTCATATCATGTATTTTGGCAGTATCCATTGATCCTCTA TTTCTCTACCTTCCTGTTTTTAAGGATGAAGGGAAGTGTCTCCACATAGATGAAAGTTTA GCAAAGATAGTAAGTTGGATGCGGACAGCAGTTGATCTCTTTTACCTTATCCGCATGGTT CTCCAATTTCGAACAGCTTTTATTGCTCCATCTTCCCGTGTTTTTGGGCGAGGTGAACTT GTAATAGATCCCAAGCAAATAGCAACCAGATACCTCAGCCGTTACTTTGTAGTGGATTTC TTTTCCATTCTTCCTGCACCGCAGATTGTGATATGGAGATATCTTGGTGGATCAAGAGGT TCGGATGTATTGATTACAAAGACATTATTATCGTACATCATCCTCATTCAATATATTCCT AGATTTTTGCGGTTTATTCCATTAAGTTCGGATTTGAAAAAGACTGCAGGGGTGTTTGCA GAAACTGCTTGGGCTGGTGCTGCATATTATCTGTTGTGGTTTGTTCTAGCTAGTCATATA TTTGGGGCCATATGGTACCTGTTAGCTGTCGAACGCAAAGATACATGTTGGAATGAAGCA TGTACCGAAAATGACCAGTGCAAAGATAAATTATCTTATCTGTATTGTTCACGTGAAGGA AACTTCAATTTGACAGAATGGCAAAACATTGGCAAGAGTGTTCTTGATGAAAAATGTGCT GAGGAGGAGAAATTTTCATATGGAATATATGCAAGAGCTGTAACAACTAATGTTCTTGAC ACTGAAGATTTCGTGATCAAATATTGTTTCTGTTTGTGGTGGGGCTTGCAGAATTTGAGC ACACTTGGTCAGGGGCTTGAGACCAGTACCTATACGAAGGAAAATCTCTTTTCAATAATA TTGGCCATTTCTGGACTCTTACTATTTGCTCTTCTCATTGGAAACATGCAGACCTATCTT CAGTCTCTAACAGTACGACTTGAGGAGATGAGGGTCAAAAGGCGTGACTCAGAGCAGTGG ATGCATCACAGAGTACTTCCTCCTGAGCTAAGGGAGAGAGTTCGACGTTACGATCAGTAC AAATGGTTGGAAACTCGAGGAGTAGATGAAGAGAGTTTGGTGCAAAATCTGCCCAAAGAT CTTAGGAGAGATATTAAGCGGCATCTCTGTCTGAATTTGGTTAGAAGGGTGCCCTTGTTT GAGAACATGGATGAGAGAATGCTTGACGCCATATGTGAGAGATTGAAACCAAGTTTATGC ACCGAAAGAACATATATAGTTAGAGAAGGAGATCCAGTTGGTGAAATGATGTTTATAATC CGTGGTCGCCTAGAAAGTGTAACAACTGATGGAGGGAGAAGTGGATTCTTCAACAGAGGT ATCTTGAAAGAAAATGACTTCTGTGGTGAGGAGCTGCTAACATGGGCATTGGATCCAAAA TCCGGGTCTAACTTGCCGCCATCAACTAGGACAGTCAAGGCTTTGACAGAAGTAGAGGCA TTTGCCTTAGAGGCAGAAGAAGTGAAGTACATTACATCACAGTTCAGGCGGTTGCAGAGT CGACAGGTACAGCACACTTTTAGGTTTTACTCGCAGCAATGGAGAACCTGGGCTGCCAGC TTCATACAAGCTGCATGGCGCCGGCATACAAGGAGGAAAATTGCAGAACTTCGTCAAATT GAGGAAATGGAAGAGGACGGATTTAATGAGAACGATGATGGAGAAACTGAGTTTACTCCA ATGCTGCACAAATCTCTGGAGAGACCATATTAG