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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g116770.3.1
CDS Infomation

seed dormancy control protein (AHRD V3.3 *** AT1G15320.2)
Sequence

ATGAAGCGGCCTTCTTCTCTGCCCGTATTGAAGCAACTCAAAGGAACTCATCACGTTGAT
GTCAATTCTAACAAAGGAAAATCTATACTCGAAGATGAAGACGAATACGATGAGATCATC
GATTTCGAGAGAATCAGCACACCTGTAATTTGCAAAACAGTACAAAATTGGGAAGCCACC
AGTCGAGGGGAAGAGTTTTCTTGCGAAAAACAGGGGCTATGGAGGCGTGAGCAGACAAAC
AGAGCAACCAGGCTAGAGAAACAGCTAAAAGCAAGATGGGCAGTGGATGGACTTATCGAA
GAAGAACTCAATCGCTTTCGAGCCCAATACAAAAGATCTATAGTTCCATCAAAGCTCAAA
GATGTAGTTCAACTGATCACGCCTAAATGGACTCCATCGCCAGAGCTAGCCACATTAACT
TGGTTAGGCGATTGGCGGCCTTCAACAATCCTGGATCTTCTTCAATACTTAGCCCATTCA
TCTGGGCTTTCAAAATCTCTACCAGATTCAGTGGCCATTGAAGTGGCATTGCCCCAATTG
ATCAACGAGTTACGAATCGAGGAGGCGGTGATCGATGAAGAAATGGCTGAGATTCAGTCC
AATTGCATATTCTATCTCCCATTTGGCCCAAAGAAAGAGGCAAATAAAGGTAAGCCTGCA
ATGGCTTGTGTAGAATCTGAGTTTAAGAAGATTCATAGGGTTATTACTAAGGCCCAAAAT
TTGAGGTTAAAGGCCATGGAAATGGCAGTGAAGAAGGTGTTAAGCAGAACCGATGCAGCA
GAGTTTTTGGTTGCTTTTGCTGGAATTCAAGATTTGGTTCATCAATGGGCTATGCAATAC
AAATTGCAAAAAGGCCCAGTTTCTATAAGTACTAAAGCCCTCAAGTCTGGTGGTAGCCCA
CTTAAGTAG

Peptide Sequence

PEP ID

Solyc03g116770.3.1
PEP Infomation

seed dormancy control protein (AHRD V3.3 *** AT1G15320.2)
Sequence

MKRPSSLPVLKQLKGTHHVDVNSNKGKSILEDEDEYDEIIDFERISTPVICKTVQNWEAT
SRGEEFSCEKQGLWRREQTNRATRLEKQLKARWAVDGLIEEELNRFRAQYKRSIVPSKLK
DVVQLITPKWTPSPELATLTWLGDWRPSTILDLLQYLAHSSGLSKSLPDSVAIEVALPQL
INELRIEEAVIDEEMAEIQSNCIFYLPFGPKKEANKGKPAMACVESEFKKIHRVITKAQN
LRLKAMEMAVKKVLSRTDAAEFLVAFAGIQDLVHQWAMQYKLQKGPVSISTKALKSGGSP
LK*

Transcript Sequence

Transcript ID

Solyc03g116770.3.1
Transcript Infomation

seed dormancy control protein (AHRD V3.3 *** AT1G15320.2)
Sequence

GACATTCCAACATAGTTATATTTAGTATATATACTCTTCTTGTACTCCACATGTAACTGA
AATTTCACAATTTCGATTTCTCTTTGAGAGAAAAACAGAGCAAACGAAGAAAAATGAAGC
GGCCTTCTTCTCTGCCCGTATTGAAGCAACTCAAAGGAACTCATCACGTTGATGTCAATT
CTAACAAAGGAAAATCTATACTCGAAGATGAAGACGAATACGATGAGATCATCGATTTCG
AGAGAATCAGCACACCTGTAATTTGCAAAACAGTACAAAATTGGGAAGCCACCAGTCGAG
GGGAAGAGTTTTCTTGCGAAAAACAGGGGCTATGGAGGCGTGAGCAGACAAACAGAGCAA
CCAGGCTAGAGAAACAGCTAAAAGCAAGATGGGCAGTGGATGGACTTATCGAAGAAGAAC
TCAATCGCTTTCGAGCCCAATACAAAAGATCTATAGTTCCATCAAAGCTCAAAGATGTAG
TTCAACTGATCACGCCTAAATGGACTCCATCGCCAGAGCTAGCCACATTAACTTGGTTAG
GCGATTGGCGGCCTTCAACAATCCTGGATCTTCTTCAATACTTAGCCCATTCATCTGGGC
TTTCAAAATCTCTACCAGATTCAGTGGCCATTGAAGTGGCATTGCCCCAATTGATCAACG
AGTTACGAATCGAGGAGGCGGTGATCGATGAAGAAATGGCTGAGATTCAGTCCAATTGCA
TATTCTATCTCCCATTTGGCCCAAAGAAAGAGGCAAATAAAGGTAAGCCTGCAATGGCTT
GTGTAGAATCTGAGTTTAAGAAGATTCATAGGGTTATTACTAAGGCCCAAAATTTGAGGT
TAAAGGCCATGGAAATGGCAGTGAAGAAGGTGTTAAGCAGAACCGATGCAGCAGAGTTTT
TGGTTGCTTTTGCTGGAATTCAAGATTTGGTTCATCAATGGGCTATGCAATACAAATTGC
AAAAAGGCCCAGTTTCTATAAGTACTAAAGCCCTCAAGTCTGGTGGTAGCCCACTTAAGT
AG