Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g116380.3.1
CDS Infomation

WD repeat-containing protein 43 (AHRD V3.3 *** A0A0B2P182_GLYSO)
Sequence

ATGGCGAGGGAGAAGCTAAAATCCCTAGTTACATCATTCACTACCGGCGGTGAGTATCTC
GCTGTATTGTCGCCTGATGGAACTGTTAGAGTTTGGAACACAAGTAGTGGAAGCTTATTT
GGTCAGTGGAAACCAGAGAATTCTGGAGACAGTTTCTCTTACATGGCATGCTGTATTATT
GGAAAGAAGCACAGAAAAGAACAATGTCTATTAGTAGCTCTTGCCTCAGATGATGGAACT
GTTTTAACAGTTGACATTTCTGCTAAATTGGTAAGGTGGAGAAAAGATGGAGCCCTTCCT
AGCGGAGCTGCTGGTCTGTTTTTTGTGGGCAAAGGTCGCAGGGTTAATGCTGTTGCTGCG
AATGGTTTAGTACTTGAGATGAACTCCGAAACTGGAGAAGTCAACAAAGAGTTCAAAGTG
TCAAAGAAGTCCATTTCTTCAGTAGCTCATTCAACTGACCAGAAAATTATAGCTGTGGCC
AGTGATAAGTTGCGATTTCTAAGTCCAGAAAGCGGGAAAGAGTTGCTGAAGTTTTCTCCT
GATTCAGCTACTGCACAACATATTTGGCTATCTAATGATGCTCAATTTGCTATTACTGTG
GGGTTTGGCGAGAAACAACTTCAAGTGTGGAAACTTGATTTTGGGAATAGGGCTGCAGAT
TATGGGCATGTTGTTTCCATGAAACATCCTCCTGTAATGGTTGAATGCAGGAATAAGTGC
AAGGGAGAAGATGGTATGGTTGTCCTTGCAACATCAGAGAAAGGTGTTTGTTATGTTTGG
AACTTTGAGTCCGTTACTGATGAAGCTGCAAAGCCAATTAAGATCTCAGTAAAACCCAGC
AAAGGGGAAACAGATGGAAAAGCTAGAAAGAATCTTTTGCCCGTAATCGCTGCAAGATTG
CATGCTTTAGATAGAGATGCACATTTAAGAGCCTTGATTGCTTATGGTTCTGTTGAATCC
CCAGAGTTTACATCAGTAGGCATTTCAAATCCAGGGGAGGATATCGTCATAGCAGCAGGG
GACCAGACCGAAAAAGCGGTTGCTTCAGTTCAAGAAAACGGCCATGCCAAAAAAGGTGGA
GATATGGAAGTTGAAGGTGCTAACTTAATCCAGAGAAGCAAAGTGACAAACAAACGACCA
GCATCTGATCTGGATGTTACTGGTGAAGCGACTATTACAGATAATGGTAATGGTGAACCT
ATTGACGGAGTTCAGATTGATGATTTTAGCGAGCCAACCATGGGCGAGAAACTCGCGATG
CTCCATTTGGAAGACAACAGTGAAGATAAAAGCAACAAGAATCTAGAATTTGCTCTTCAA
AAGAAGCCTCCAAGTGCTGATTCAGTTCATGTTCTGCTGAAGCAAGCACTTCACGCTGAT
GATCGAGCACTTTTGATAGATTGCTTATACAGACAGGATGAGAAGGTCATTGCAAATTCA
GTCTCTCTTTTAAATCCTTCAGATGTTCTCAAGCTTTTACAGTCACTCTTATCAATTATC
CAGTCAAGGGGTGCTGTATTGGCTTGTGCCCTTCCTTGGCTGCGAAGTTTGCTTCTCCAA
CACGCTAGTGGAATAATGTCCCAAGAATCCTCTTTGCTTGCACTCAACTCTTTATATCAG
CTTATTGATGCCAGACTTTCAACTCTCCACCAAGCCCTTCAGTTATCGAGCTCCTTAGAA
TTGCTTCACGCAGGGACTATTGATGATGGTGATGATGAAGAAGATGGTGCCATACAGCCC
ATCATATATGAAGATAACGATGACAGTGAGGAGGAGGGTTCTGAAGTTACTATGGAAACA
GAAAGCATCCCAGATGTTGAGGAACCCGAAGCTTTCAGCGACGTTAGTGATCGCGAAGGA
AGTGATGGCATGAGCGAGTGA

Peptide Sequence

PEP ID

Solyc03g116380.3.1
PEP Infomation

WD repeat-containing protein 43 (AHRD V3.3 *** A0A0B2P182_GLYSO)
Sequence

MAREKLKSLVTSFTTGGEYLAVLSPDGTVRVWNTSSGSLFGQWKPENSGDSFSYMACCII
GKKHRKEQCLLVALASDDGTVLTVDISAKLVRWRKDGALPSGAAGLFFVGKGRRVNAVAA
NGLVLEMNSETGEVNKEFKVSKKSISSVAHSTDQKIIAVASDKLRFLSPESGKELLKFSP
DSATAQHIWLSNDAQFAITVGFGEKQLQVWKLDFGNRAADYGHVVSMKHPPVMVECRNKC
KGEDGMVVLATSEKGVCYVWNFESVTDEAAKPIKISVKPSKGETDGKARKNLLPVIAARL
HALDRDAHLRALIAYGSVESPEFTSVGISNPGEDIVIAAGDQTEKAVASVQENGHAKKGG
DMEVEGANLIQRSKVTNKRPASDLDVTGEATITDNGNGEPIDGVQIDDFSEPTMGEKLAM
LHLEDNSEDKSNKNLEFALQKKPPSADSVHVLLKQALHADDRALLIDCLYRQDEKVIANS
VSLLNPSDVLKLLQSLLSIIQSRGAVLACALPWLRSLLLQHASGIMSQESSLLALNSLYQ
LIDARLSTLHQALQLSSSLELLHAGTIDDGDDEEDGAIQPIIYEDNDDSEEEGSEVTMET
ESIPDVEEPEAFSDVSDREGSDGMSE*

Transcript Sequence

Transcript ID

Solyc03g116380.3.1
Transcript Infomation

WD repeat-containing protein 43 (AHRD V3.3 *** A0A0B2P182_GLYSO)
Sequence

TGCCGAGTCTTCTCCTCCCTTTCTCTTCTTTCAGCAGCGTTTTCTTCCCCGACAATATCA
AATAGTCTCTCTATTTATCTGCGTGATTCTTCTCTCTTCATTATCGCAGGCTCGCTACTT
CGTTCCATTTTTACTCAGATTCTGTTGTTATCTTTCTGCGGCCATTTTTTTCATGGCGAG
GGAGAAGCTAAAATCCCTAGTTACATCATTCACTACCGGCGGTGAGTATCTCGCTGTATT
GTCGCCTGATGGAACTGTTAGAGTTTGGAACACAAGTAGTGGAAGCTTATTTGGTCAGTG
GAAACCAGAGAATTCTGGAGACAGTTTCTCTTACATGGCATGCTGTATTATTGGAAAGAA
GCACAGAAAAGAACAATGTCTATTAGTAGCTCTTGCCTCAGATGATGGAACTGTTTTAAC
AGTTGACATTTCTGCTAAATTGGTAAGGTGGAGAAAAGATGGAGCCCTTCCTAGCGGAGC
TGCTGGTCTGTTTTTTGTGGGCAAAGGTCGCAGGGTTAATGCTGTTGCTGCGAATGGTTT
AGTACTTGAGATGAACTCCGAAACTGGAGAAGTCAACAAAGAGTTCAAAGTGTCAAAGAA
GTCCATTTCTTCAGTAGCTCATTCAACTGACCAGAAAATTATAGCTGTGGCCAGTGATAA
GTTGCGATTTCTAAGTCCAGAAAGCGGGAAAGAGTTGCTGAAGTTTTCTCCTGATTCAGC
TACTGCACAACATATTTGGCTATCTAATGATGCTCAATTTGCTATTACTGTGGGGTTTGG
CGAGAAACAACTTCAAGTGTGGAAACTTGATTTTGGGAATAGGGCTGCAGATTATGGGCA
TGTTGTTTCCATGAAACATCCTCCTGTAATGGTTGAATGCAGGAATAAGTGCAAGGGAGA
AGATGGTATGGTTGTCCTTGCAACATCAGAGAAAGGTGTTTGTTATGTTTGGAACTTTGA
GTCCGTTACTGATGAAGCTGCAAAGCCAATTAAGATCTCAGTAAAACCCAGCAAAGGGGA
AACAGATGGAAAAGCTAGAAAGAATCTTTTGCCCGTAATCGCTGCAAGATTGCATGCTTT
AGATAGAGATGCACATTTAAGAGCCTTGATTGCTTATGGTTCTGTTGAATCCCCAGAGTT
TACATCAGTAGGCATTTCAAATCCAGGGGAGGATATCGTCATAGCAGCAGGGGACCAGAC
CGAAAAAGCGGTTGCTTCAGTTCAAGAAAACGGCCATGCCAAAAAAGGTGGAGATATGGA
AGTTGAAGGTGCTAACTTAATCCAGAGAAGCAAAGTGACAAACAAACGACCAGCATCTGA
TCTGGATGTTACTGGTGAAGCGACTATTACAGATAATGGTAATGGTGAACCTATTGACGG
AGTTCAGATTGATGATTTTAGCGAGCCAACCATGGGCGAGAAACTCGCGATGCTCCATTT
GGAAGACAACAGTGAAGATAAAAGCAACAAGAATCTAGAATTTGCTCTTCAAAAGAAGCC
TCCAAGTGCTGATTCAGTTCATGTTCTGCTGAAGCAAGCACTTCACGCTGATGATCGAGC
ACTTTTGATAGATTGCTTATACAGACAGGATGAGAAGGTCATTGCAAATTCAGTCTCTCT
TTTAAATCCTTCAGATGTTCTCAAGCTTTTACAGTCACTCTTATCAATTATCCAGTCAAG
GGGTGCTGTATTGGCTTGTGCCCTTCCTTGGCTGCGAAGTTTGCTTCTCCAACACGCTAG
TGGAATAATGTCCCAAGAATCCTCTTTGCTTGCACTCAACTCTTTATATCAGCTTATTGA
TGCCAGACTTTCAACTCTCCACCAAGCCCTTCAGTTATCGAGCTCCTTAGAATTGCTTCA
CGCAGGGACTATTGATGATGGTGATGATGAAGAAGATGGTGCCATACAGCCCATCATATA
TGAAGATAACGATGACAGTGAGGAGGAGGGTTCTGAAGTTACTATGGAAACAGAAAGCAT
CCCAGATGTTGAGGAACCCGAAGCTTTCAGCGACGTTAGTGATCGCGAAGGAAGTGATGG
CATGAGCGAGTGA