Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g116370.3.1
CDS Infomation

RP/EB family microtubule-associated protein (AHRD V3.3 *** A0A072TJV8_MEDTR)
Sequence

ATGGCGAATATAGGGATAATGGATAGTGCCTATTTTGTTGGAAGGAATGAGCTATTGACA
TGGATCAATGCCAGGTTACAGCTTAATCTTACCCGCATTGAAGAGGTTGCATCTGGGGCT
GTGCAGTGTCAGATGATGGACATGACCTATCCAGGAGCTGTTCCAATGCACAAGGTTAAC
TTTGATGCAAAGACTGAATATGACATGATCCAAAACTACAAAGTGCTGCAAGATGTGTTT
AGCAAGCTAAAAATTGACAAGCATATTGAAGTTAACAGGCTTGTTAAGGGCCGTCCATTG
GATAATTTGGAGTTTCTGCAATGGCTGAAGCGTTACTGTGAGTCTGTAAATGGTGGTATT
ATGAATGAGAACTATAATCCTCTGGAACGTAGAAGTAAGGTTGGAAGGGAACGAAATGTG
AAGGGTTCTCAGAGATCTGCAAAGTCACTTCTAACTAACAACAGTCATAACCCTGGATTA
GGGGAAGGCTTGACTAAGACTACAGGAATAAAACAAGGAAGGTCAAGTCCAGTAATGGGT
GGGGTTAATTCTTCAACGGAGATTCAGGCTTTGTCAAAGGAGGTTACAGATCTCAAGCTC
TCTGTTGACCATTTGGAGAAAGAAAGAGATTTTTATTTTGCAAAGTTACGAGATATTGAG
ATTCTCTGTCAGACTCCAGACTTAGAAGATATCCCGATGGCTATGGCAGTTAAAAAGATA
TTATATGCTGCTGATGCAAGAGAATCAGCTTTGGCCGAAGCTCAAGAAGTTCTAAGTCAC
TCCGTGGATGGAAGTAAAAGCTGA

Peptide Sequence

PEP ID

Solyc03g116370.3.1
PEP Infomation

RP/EB family microtubule-associated protein (AHRD V3.3 *** A0A072TJV8_MEDTR)
Sequence

MANIGIMDSAYFVGRNELLTWINARLQLNLTRIEEVASGAVQCQMMDMTYPGAVPMHKVN
FDAKTEYDMIQNYKVLQDVFSKLKIDKHIEVNRLVKGRPLDNLEFLQWLKRYCESVNGGI
MNENYNPLERRSKVGRERNVKGSQRSAKSLLTNNSHNPGLGEGLTKTTGIKQGRSSPVMG
GVNSSTEIQALSKEVTDLKLSVDHLEKERDFYFAKLRDIEILCQTPDLEDIPMAMAVKKI
LYAADARESALAEAQEVLSHSVDGSKS*

Transcript Sequence

Transcript ID

Solyc03g116370.3.1
Transcript Infomation

RP/EB family microtubule-associated protein (AHRD V3.3 *** A0A072TJV8_MEDTR)
Sequence

TATATATAAATAGCAGTATCTCTCTTCTTCTCATTCCATATTGTGAGTTTTTGTTTCTTC
CTTTTTTTCTCATTCCATCTGCTTTCGTAGAATTGAAACAAGAAGAAAAATGGCGAATAT
AGGGATAATGGATAGTGCCTATTTTGTTGGAAGGAATGAGCTATTGACATGGATCAATGC
CAGGTTACAGCTTAATCTTACCCGCATTGAAGAGGTTGCATCTGGGGCTGTGCAGTGTCA
GATGATGGACATGACCTATCCAGGAGCTGTTCCAATGCACAAGGTTAACTTTGATGCAAA
GACTGAATATGACATGATCCAAAACTACAAAGTGCTGCAAGATGTGTTTAGCAAGCTAAA
AATTGACAAGCATATTGAAGTTAACAGGCTTGTTAAGGGCCGTCCATTGGATAATTTGGA
GTTTCTGCAATGGCTGAAGCGTTACTGTGAGTCTGTAAATGGTGGTATTATGAATGAGAA
CTATAATCCTCTGGAACGTAGAAGTAAGGTTGGAAGGGAACGAAATGTGAAGGGTTCTCA
GAGATCTGCAAAGTCACTTCTAACTAACAACAGTCATAACCCTGGATTAGGGGAAGGCTT
GACTAAGACTACAGGAATAAAACAAGGAAGGTCAAGTCCAGTAATGGGTGGGGTTAATTC
TTCAACGGAGATTCAGGCTTTGTCAAAGGAGGTTACAGATCTCAAGCTCTCTGTTGACCA
TTTGGAGAAAGAAAGAGATTTTTATTTTGCAAAGTTACGAGATATTGAGATTCTCTGTCA
GACTCCAGACTTAGAAGATATCCCGATGGCTATGGCAGTTAAAAAGATATTATATGCTGC
TGATGCAAGAGAATCAGCTTTGGCCGAAGCTCAAGAAGTTCTAAGTCACTCCGTGGATGG
AAGTAAAAGCTGAATTGGAATTGGAATATGATAAGTAAAAATTGCGTGCAGTAGTTTCTT
AAATGTAGAGGTTACTGTTTCATCTTTGGTGAAATGTTGCTAAGCTTTCTGTTGTGTACA
TCCATGTGCTCTTTTTTTGGCTTTGAAAGAGAAGTCTCTCTAAT