Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g116360.2.1
CDS Infomation	Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** G7K368_MEDTR)
Sequence	ATGAACAACGTACAGAGGAACAGTCTTGGAGAGAGGAATGTGGAACAGGCCATTACAGCC TTAAAAAGAGGATCATACCTACTGAAGTATGGACGCAGAGGAAAGCCAAAATTCTGCCCT TTTCGTCTTTCTACTGATGAAACAAGACTGATATGGTATGTTGAAAAGGAGGAGAAACAG CTTCAATTGAGTCAGGTTTCAAGGATTATTCCCGGTCAACGAACTGCAAATTTTCTGCGG TTTCCTAGACCTGAGAAGGAATATCAGTCATTTTCACTTCTATATGGCAAAAGTTCCTTG GATTTGATCTGCAAAGATAAGGAAGAGGCAGAAGTCTGGTTTGTTGCTCTCAGAGCCTTG ACATCTCGGGTTGACTGTCAAAAGTGGACAAGCGATATAAGATATGATATAGCATATTCT GATGGTTCAACTTCTGCGACACAGCGACGTTCTCACTCTGCTTTGTCAAGTAGTAGTGGA AGCAGCAGTACACCCTATGAGGACCCAAAGAAAAATCTATTGGGTTCAGTTCCATCTCAG AGTCCTCCAAGAAAGAGATTAGAAAGAGCGTTCTCCGACTATTTACTTTATAATTCAGCG GCAAAATGTTCTTCCCATAGAGAGTTTGCTACTAGTTCCTTCAACTCAAGATCATACGGA AACCTAGATGATGAAATTGGGCAGAGCTCTACAGATACTATCCGATCTAGTTTTTCCAGT GCCATTAGTTCATCTAGCCACGGATCTTTCGCAAATGCTGATACCCTCTGTGACATCTTA ATATGGGGAGAAGGAATTGGTGATGGCCTGCTTGGTGGTGGGATGTGTGGACTTGGAAAA TTTGAAACTGCAAGAAGAGATGCACCTTTGCCGAGGACCTTGGAATCGGCATTAATACTT GATGCTCAATATGTTGCTTGTGGGAGCAGACATGCCGTACTAATCACAAAGCAAGGAGAG ATTTTTAGTTGGGGAGAGGGCTTAAGTGGCAGACTAGGGCATGGAGTAGAATCTGACATT TCTAGCCCAAAACTTATTGACAGTCTCTGTGGGTTAAATGTTACATCAGCAGCATGCGGA GATTATCATACTTGTGCCACAACAATCACTGGAGATCTCTATACATGGGGTGAGGGTACC TTTAACTTTGGCCTCCTTGGGCATGATACTGGAATCAGCCACTGGATCCCCAAAAAAGTT AGGGGTCCTTTAGTTGGTAAGCATGTCTCATATGTCTCTTGTGGTCCTTGGCATTCAGCT GTTATAACATCTGTTGGCCAGCTTTTTACTTTTGGTGATGGAACATTTGGTGCTCTAGGT CATGGGGACCGTAGTAGCATTGGTATTCCTAGGGAAGTTGAAACTCTACAAGGACTAAGA ACAGTTAGAGTGGCATGTGGGCATTGGCACACTGCAGCTGTGGTAGAGCTCTCTTTTGAC GATTCCAGTTCTTGTAATTCCCCACCTTGGAAGCTTTTCACCTGGGGAAATGGGGATGAT GGACAACTTGGACACGAAGATAATGCTTCTAGACACACTCCATGCAAAGTTGTACAGTTG GATGGCATTAACTTCAGTAGAGTAGCCTGTGGCCATAGTATTACAGTTGCTCTGACAACA TTAGGGCAAGTATATACAATGGGGAAAGTTGATTATGGGCAACTAGGAATTCCTGGAAGT ACTGGGAAGTTTCCTTCTCGTGTTCAAGGAAAAATTACAGATTGTTTCATTGAAGAAATA GCTTGTGGATCTTTCCATGTTGTGTCCCTGAGCTCAAACTCTGAGCTTTACACGTGGGGA AAGGGAGGAAATGGACAGCTAGGACATGGGGACAATCATGATAGGAACACTCCTACACTG GTTGAAGCGCTGAAAGCAAAAAAAGTAAAGGATGTGGTCTGTGGAAATAATTTTACTGCA GCCATTTGTCTACACAGAGAAGTGTCTCTCGCTGATAATTCCATTTGTGCTGGATGCCAG AGTCCATTTAATCTCAGACGAAAACGTCATAACTGCTACAACTGTGGGCTTGTCTTTTGC ACAGTATGCACCAGTAAAAGATCTGTAAGAGCTTCTTTGGCTCCAAAAATGAACAAACCT TATCGTGTATGTGAAGATTGTTTTACTAAATTGAACAAGGGCTTGGATATTGGATTAACT TGTCTACCACCGAAGGTCACTACTGGAAGCTTACAGAAGAATACTGGAGAGAGGAGGAAA GAGACCTCACCTTCCAAACAAAAAGGCCTTCTCTCTAGGCTGTCCTCATTCAATTCATTC AGGTCTGACGATAAGCGTTTTAGAAAGAACCAGAAGCAAGATTCAAACTCTGAGAATGTC TCTCCAATTCCTAATGGCAATACTCAGAGTGAAGTATCTCAAACATCAAGCCAATTGTTG TCCTTTTCTAGTTGCCCTGAGATATTGTCTGTTTCTTTTGTTGGATCAACAAGTCACTCT CAAGCTGGTTCTCCTGCTTCATTTGAATCATGTTCATCTAATTCTGTGTTACTGAGATCT GCTTTTGCTGCACAAGCAAATCACGAAGTGGATCTTGATGATTCAAAGCAAACAAGTGAA AGTCTGAAAAAGGAAATTTCCATATTGAAGGAGCAGGTAGACATTCTTACCCAGAGATCC CTGTTCTTAGAAGCTGAGCTTGAGAAAAAATCAACTCAACTACAAGAGAAATCTGAAGAA GCTATAACGGAAACAGACAAAAATAATGCTGCTAAGGAAGTCATCAAGTCTCTAATGACG CAGGTAAAGGGCAACACTGCAAGAGCACCTCAGGATGGTTCTGCAGAAAATCTGATCCAT TCGACGATGACAGTACCTTGA

Peptide Sequence

PEP ID	Solyc03g116360.2.1
PEP Infomation	Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** G7K368_MEDTR)
Sequence	MNNVQRNSLGERNVEQAITALKRGSYLLKYGRRGKPKFCPFRLSTDETRLIWYVEKEEKQ LQLSQVSRIIPGQRTANFLRFPRPEKEYQSFSLLYGKSSLDLICKDKEEAEVWFVALRAL TSRVDCQKWTSDIRYDIAYSDGSTSATQRRSHSALSSSSGSSSTPYEDPKKNLLGSVPSQ SPPRKRLERAFSDYLLYNSAAKCSSHREFATSSFNSRSYGNLDDEIGQSSTDTIRSSFSS AISSSSHGSFANADTLCDILIWGEGIGDGLLGGGMCGLGKFETARRDAPLPRTLESALIL DAQYVACGSRHAVLITKQGEIFSWGEGLSGRLGHGVESDISSPKLIDSLCGLNVTSAACG DYHTCATTITGDLYTWGEGTFNFGLLGHDTGISHWIPKKVRGPLVGKHVSYVSCGPWHSA VITSVGQLFTFGDGTFGALGHGDRSSIGIPREVETLQGLRTVRVACGHWHTAAVVELSFD DSSSCNSPPWKLFTWGNGDDGQLGHEDNASRHTPCKVVQLDGINFSRVACGHSITVALTT LGQVYTMGKVDYGQLGIPGSTGKFPSRVQGKITDCFIEEIACGSFHVVSLSSNSELYTWG KGGNGQLGHGDNHDRNTPTLVEALKAKKVKDVVCGNNFTAAICLHREVSLADNSICAGCQ SPFNLRRKRHNCYNCGLVFCTVCTSKRSVRASLAPKMNKPYRVCEDCFTKLNKGLDIGLT CLPPKVTTGSLQKNTGERRKETSPSKQKGLLSRLSSFNSFRSDDKRFRKNQKQDSNSENV SPIPNGNTQSEVSQTSSQLLSFSSCPEILSVSFVGSTSHSQAGSPASFESCSSNSVLLRS AFAAQANHEVDLDDSKQTSESLKKEISILKEQVDILTQRSLFLEAELEKKSTQLQEKSEE AITETDKNNAAKEVIKSLMTQVKGNTARAPQDGSAENLIHSTMTVP*

Transcript Sequence

Transcript ID	Solyc03g116360.2.1
Transcript Infomation	Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** G7K368_MEDTR)
Sequence	AAAAGAGAACCACTCATCAAACATGCATTACCTTGTATCATATCATACAACAAACCATTT CGATGTGGGGTGTCCCAAAAATTGACAATTTTTAATTTTGTACAAATTAAATAATTTAAA TCCACTAAAATCTTCAAATTCTAAATATTAATTGATACAATATTTCCTCATTCAAACAAA CTTATCAATCATTGCTTTTATATCTTATTCCATTGTCATTAATTCATTACTATATTATAC TAGCCAATAAAATATATATGTTTGACTCTATGTTTGGCTAAATACAATCATACATCATTA TGGAATGAAAGGAGTAGTTGTTATTCAACATCTTTTTACAAATTCTACATCTAAATTATT CCAACCTTGGAATTTAGCATGAAATATATTTAGTACTATTACACTGTGGAAATTATTACA CCAACGAAGGAGCTTAAAGGCCAGCCTCTCTCTATTACATTCTGTTTCTTTTCGCAAAAT ATCGTTTTGTTAATAAAATGCTAAGAGAAGAGAGGAAAACAATGTTAAAATCGATTGAAA AATAATGTGACTCCGTAGCTACTATTTTCCCTTTTATAATTTATGAAATACAATTTGAAT TGACGTAAGACTTATAAAAAAAAAATTGGATTGTGAGATATTAAAACATGTACGTACAGT AATAATATTTCTATGACTACATATATTTATGTCGTAAATCATTTTTGAAAGGTGATATAT TTTTACTAGCTCAATTTAAGTGTGTGAATATTTCTTAAGTGTTTAAAAAAATTTGAATAG AAAATAATTATGACTTAATTTAGTAGATATATAAAATTCATTTCAAAAATTTAAAGATTT CATATGAATTAAATTAAATTATTTAATTATTGAAAAAAATATCACATGAGACAAAAGAAT AATTATAATTCAAAATATTATTACAGTAAAAAATGGGGTTGTTTAAAAATGGTAAGAAAA ATGCAAGAAAAAGTAATGTAAAATAGGAAGGTAGATAACAAACCCAGGTGGGAATAAAAA GGCGGGAAGTTAGTTGATTGGAGACAAGACTGAGAAAAACAGAAAAGGTCCCTGTTAACA GTAGTACCCCCACTATCTTGCCGCAACAGATTCATATTTCGTTGACTACGTGGCATCAAC AAAGGAGTATAATTTTCACCATTGAACCACCAAATAAGAAAAGAATTCCCTGCTACGTAT ATATTTCATTTACATCACACGCAATAACTTACGTACTCCTCACACTTAAAAAGGAGAGAG GAAAAACCACACTAATTTCCTCACAACACTCTCTGCCAAATTCTCATTTCTCTTCCGATC CGACAAATTTTGGTTATAGAGAGAGATATCTACTGAGCGCTGAGGCTTGGCTTTTGCTAT CAAATCGAAAATCTACACTTCGGAGTTCCCTTCGTGTTTCCTCTGAGAGCCTGAAGAAGA GGAGTTCCTGTAATTCTATGATTTTTTCCAGAATCGACCTCGGTTGACAAAAAGTCATCC TATGGAGGAACTATGGGGGCTCTTTTGCCAGCTACCAGATGTTTGGTATTTTCATTATCA AAGTGCTAGAGTTCATATAACAGCTTAATGAACAACGTACAGAGGAACAGTCTTGGAGAG AGGAATGTGGAACAGGCCATTACAGCCTTAAAAAGAGGATCATACCTACTGAAGTATGGA CGCAGAGGAAAGCCAAAATTCTGCCCTTTTCGTCTTTCTACTGATGAAACAAGACTGATA TGGTATGTTGAAAAGGAGGAGAAACAGCTTCAATTGAGTCAGGTTTCAAGGATTATTCCC GGTCAACGAACTGCAAATTTTCTGCGGTTTCCTAGACCTGAGAAGGAATATCAGTCATTT TCACTTCTATATGGCAAAAGTTCCTTGGATTTGATCTGCAAAGATAAGGAAGAGGCAGAA GTCTGGTTTGTTGCTCTCAGAGCCTTGACATCTCGGGTTGACTGTCAAAAGTGGACAAGC GATATAAGATATGATATAGCATATTCTGATGGTTCAACTTCTGCGACACAGCGACGTTCT CACTCTGCTTTGTCAAGTAGTAGTGGAAGCAGCAGTACACCCTATGAGGACCCAAAGAAA AATCTATTGGGTTCAGTTCCATCTCAGAGTCCTCCAAGAAAGAGATTAGAAAGAGCGTTC TCCGACTATTTACTTTATAATTCAGCGGCAAAATGTTCTTCCCATAGAGAGTTTGCTACT AGTTCCTTCAACTCAAGATCATACGGAAACCTAGATGATGAAATTGGGCAGAGCTCTACA GATACTATCCGATCTAGTTTTTCCAGTGCCATTAGTTCATCTAGCCACGGATCTTTCGCA AATGCTGATACCCTCTGTGACATCTTAATATGGGGAGAAGGAATTGGTGATGGCCTGCTT GGTGGTGGGATGTGTGGACTTGGAAAATTTGAAACTGCAAGAAGAGATGCACCTTTGCCG AGGACCTTGGAATCGGCATTAATACTTGATGCTCAATATGTTGCTTGTGGGAGCAGACAT GCCGTACTAATCACAAAGCAAGGAGAGATTTTTAGTTGGGGAGAGGGCTTAAGTGGCAGA CTAGGGCATGGAGTAGAATCTGACATTTCTAGCCCAAAACTTATTGACAGTCTCTGTGGG TTAAATGTTACATCAGCAGCATGCGGAGATTATCATACTTGTGCCACAACAATCACTGGA GATCTCTATACATGGGGTGAGGGTACCTTTAACTTTGGCCTCCTTGGGCATGATACTGGA ATCAGCCACTGGATCCCCAAAAAAGTTAGGGGTCCTTTAGTTGGTAAGCATGTCTCATAT GTCTCTTGTGGTCCTTGGCATTCAGCTGTTATAACATCTGTTGGCCAGCTTTTTACTTTT GGTGATGGAACATTTGGTGCTCTAGGTCATGGGGACCGTAGTAGCATTGGTATTCCTAGG GAAGTTGAAACTCTACAAGGACTAAGAACAGTTAGAGTGGCATGTGGGCATTGGCACACT GCAGCTGTGGTAGAGCTCTCTTTTGACGATTCCAGTTCTTGTAATTCCCCACCTTGGAAG CTTTTCACCTGGGGAAATGGGGATGATGGACAACTTGGACACGAAGATAATGCTTCTAGA CACACTCCATGCAAAGTTGTACAGTTGGATGGCATTAACTTCAGTAGAGTAGCCTGTGGC CATAGTATTACAGTTGCTCTGACAACATTAGGGCAAGTATATACAATGGGGAAAGTTGAT TATGGGCAACTAGGAATTCCTGGAAGTACTGGGAAGTTTCCTTCTCGTGTTCAAGGAAAA ATTACAGATTGTTTCATTGAAGAAATAGCTTGTGGATCTTTCCATGTTGTGTCCCTGAGC TCAAACTCTGAGCTTTACACGTGGGGAAAGGGAGGAAATGGACAGCTAGGACATGGGGAC AATCATGATAGGAACACTCCTACACTGGTTGAAGCGCTGAAAGCAAAAAAAGTAAAGGAT GTGGTCTGTGGAAATAATTTTACTGCAGCCATTTGTCTACACAGAGAAGTGTCTCTCGCT GATAATTCCATTTGTGCTGGATGCCAGAGTCCATTTAATCTCAGACGAAAACGTCATAAC TGCTACAACTGTGGGCTTGTCTTTTGCACAGTATGCACCAGTAAAAGATCTGTAAGAGCT TCTTTGGCTCCAAAAATGAACAAACCTTATCGTGTATGTGAAGATTGTTTTACTAAATTG AACAAGGGCTTGGATATTGGATTAACTTGTCTACCACCGAAGGTCACTACTGGAAGCTTA CAGAAGAATACTGGAGAGAGGAGGAAAGAGACCTCACCTTCCAAACAAAAAGGCCTTCTC TCTAGGCTGTCCTCATTCAATTCATTCAGGTCTGACGATAAGCGTTTTAGAAAGAACCAG AAGCAAGATTCAAACTCTGAGAATGTCTCTCCAATTCCTAATGGCAATACTCAGAGTGAA GTATCTCAAACATCAAGCCAATTGTTGTCCTTTTCTAGTTGCCCTGAGATATTGTCTGTT TCTTTTGTTGGATCAACAAGTCACTCTCAAGCTGGTTCTCCTGCTTCATTTGAATCATGT TCATCTAATTCTGTGTTACTGAGATCTGCTTTTGCTGCACAAGCAAATCACGAAGTGGAT CTTGATGATTCAAAGCAAACAAGTGAAAGTCTGAAAAAGGAAATTTCCATATTGAAGGAG CAGGTAGACATTCTTACCCAGAGATCCCTGTTCTTAGAAGCTGAGCTTGAGAAAAAATCA ACTCAACTACAAGAGAAATCTGAAGAAGCTATAACGGAAACAGACAAAAATAATGCTGCT AAGGAAGTCATCAAGTCTCTAATGACGCAGGTAAAGGGCAACACTGCAAGAGCACCTCAG GATGGTTCTGCAGAAAATCTGATCCATTCGACGATGACAGTACCTTGATCCTTGTTTCAA GAAAGAGTAAACCATCCAGCTAGGATTTCATCATACTCCTAATCCTTTTGCATTTTTCTG CTGATCACTGAAGATTTATGTTGGGTGTCATCAATGTCTGAAAGTTTATCAGTCGTGAAA ATATGAGAACGGTGAGATGCACGCCAACTGGTTCAAGGGAAAAAGTCTTATTACCTGTAC AAAGGTTTGATACTAATGAAGATGTCTCTCTATCGGAAAGTGTACATTCAATTTTGCATA TAGAGTGGAGCTAATATCCGTAGTACACATTAGGATGAACTGAAGGCTGCTGTTTCTATG ATGAGTAGGTGAAAGGAAATGAAATTCATGATAATAAACAACACGCTGTGATATGTTCTT CCTCGTTTGAATTCATTGAGCTGTTGAAGTACCTACGCTTACCCACTTCATACGGTTCTC TTTCTCCTAACTGTGTAAAGAAGTATGCGGACTTCTTTTTATTTGTTTGATCCGAGGGTT CCATATCTTGTCAATTTTGATAATGTTACTGTAGAATTAACACTACGAGAATACAAATAC AAATAGCACCTTAA