Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g116270.3.1
CDS Infomation	2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein, putative (AHRD V3.3 *** A0A061FWB6_THECC)
Sequence	ATGGCTAGTTTTGATATTCCAACAATTGATGTTTCTCCATTTTTTAAATCAGATGAAAAT GAAGGAGCGAAAAAGCAGGCTATTGAGCAAATTAGAGAAGCTTGTGTTAGCTATGGTTTC TTTCAAATTGTGAATCACGGAATTCCTTCTGACTTGTTGAGCAGAACCATCGATATGTAT AAGACTTTCTTTGGCTGTTCCGATGAAGAAAAACTGTGTTTACCTGATAATTATTTAAAA AGCACGCCGAATTCAGCTGAGACTTTTGAGCACTTGTGGTTTCGTTTTCCATTCTCTGGC TTCAATAACTGCCGCAGCATTACACCTCATTTCAAGAAAGTATTGGAGGAGATTGTTTCC CATTTCACAAAATTAGGAGTTGTGTTGGAAGGGATCATAAGTGAGTGTCTTGGACTCCCT CCTGACTTCCTCTCAAACTACAGAAATGGTCGTTCTCGGGACTCGTTGATGGGGCTGCAC TACTTTCCAGCGACAGAAGATGACAACACAGGAAAACCTGCACATGAAGATCCTGGCTGC TTCACTATTCTCTACCAGGATGAAATCGGAGGCCTTCAAGTGCACAAAGATGACCACTGG ATACCCATACCGCCTTCCAAAGACAAACTAGTTGTTAACATTGGTGATGTCATTCAGGTG CTAAGCAACAATAAATTCAAGAGTGCAACTCACAAAGTAGTGAGACCAATTGAAACAAAC CGTTACTCGTACGTGTTCTTCTATAATGTGGAAGGAGACAAGTGGATTGAGCCATTACCA CAATTTACAAAGGAAATTGGAGAGTCTCCCAAGTATAGAGGATTCGTGTTTGAAGAATAT CATGAGTTGAGATTCAGAAACAGGAGTCATCCACCAGCTAGACCTGAAGATCTCATCCAT ATAACACACTACTCAATTTCTAATTAG

Peptide Sequence

PEP ID	Solyc03g116270.3.1
PEP Infomation	2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein, putative (AHRD V3.3 *** A0A061FWB6_THECC)
Sequence	MASFDIPTIDVSPFFKSDENEGAKKQAIEQIREACVSYGFFQIVNHGIPSDLLSRTIDMY KTFFGCSDEEKLCLPDNYLKSTPNSAETFEHLWFRFPFSGFNNCRSITPHFKKVLEEIVS HFTKLGVVLEGIISECLGLPPDFLSNYRNGRSRDSLMGLHYFPATEDDNTGKPAHEDPGC FTILYQDEIGGLQVHKDDHWIPIPPSKDKLVVNIGDVIQVLSNNKFKSATHKVVRPIETN RYSYVFFYNVEGDKWIEPLPQFTKEIGESPKYRGFVFEEYHELRFRNRSHPPARPEDLIH ITHYSISN*

Transcript Sequence

Transcript ID	Solyc03g116270.3.1
Transcript Infomation	2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein, putative (AHRD V3.3 *** A0A061FWB6_THECC)
Sequence	GAAGAGGAATCCTCAATGCGCTGTTTGTTGTTACTGATTTAAAATAATCAAATTGCAGAT ACTGCAAAACTTGTTTGTTTGTTTCCTATTTTTTTTTTCTGAATAATGTCAAGTACTCCT TCATATTGTTTACTCTAGTTTTAGACACCAATGCATATTACCTATTTAAAATTAAAAATA AGAAAACAGAAGGCTATTAGTTTGCCCATCGTCATCTTTCATCAGGTGGGCAGGTACATT ATGATTTTTTTATTGGTTTTTGAATTTTGGATCAGAGTTTGCTGATCTGTTGTATTTTAA TAATGTTTCTGTGGACCTTGATTCAATACTGGCTTTTGAATTTTTTTAATTTTTTGGCTT TTGGAAATCTGGATCAGGACATGAACAGACAGATGGGCAATGGAAAATGACATTCAGCGA CCAAAAAAACAAAAGAACACATGTCATACATCTAAATTAATGGTTGAGATTTAAACACCT GAATCTCATAAGAACTTGGAGAAATGAAGAGATGCCAAATTTAACTAACTTCTTATAAAA TAAACTCAATACAACATCCAATATAAGACGAAGAACGAAAAATTAAGGAAAACATCAATA TGGCTAGTTTTGATATTCCAACAATTGATGTTTCTCCATTTTTTAAATCAGATGAAAATG AAGGAGCGAAAAAGCAGGCTATTGAGCAAATTAGAGAAGCTTGTGTTAGCTATGGTTTCT TTCAAATTGTGAATCACGGAATTCCTTCTGACTTGTTGAGCAGAACCATCGATATGTATA AGACTTTCTTTGGCTGTTCCGATGAAGAAAAACTGTGTTTACCTGATAATTATTTAAAAA GCACGCCGAATTCAGCTGAGACTTTTGAGCACTTGTGGTTTCGTTTTCCATTCTCTGGCT TCAATAACTGCCGCAGCATTACACCTCATTTCAAGAAAGTATTGGAGGAGATTGTTTCCC ATTTCACAAAATTAGGAGTTGTGTTGGAAGGGATCATAAGTGAGTGTCTTGGACTCCCTC CTGACTTCCTCTCAAACTACAGAAATGGTCGTTCTCGGGACTCGTTGATGGGGCTGCACT ACTTTCCAGCGACAGAAGATGACAACACAGGAAAACCTGCACATGAAGATCCTGGCTGCT TCACTATTCTCTACCAGGATGAAATCGGAGGCCTTCAAGTGCACAAAGATGACCACTGGA TACCCATACCGCCTTCCAAAGACAAACTAGTTGTTAACATTGGTGATGTCATTCAGGTGC TAAGCAACAATAAATTCAAGAGTGCAACTCACAAAGTAGTGAGACCAATTGAAACAAACC GTTACTCGTACGTGTTCTTCTATAATGTGGAAGGAGACAAGTGGATTGAGCCATTACCAC AATTTACAAAGGAAATTGGAGAGTCTCCCAAGTATAGAGGATTCGTGTTTGAAGAATATC ATGAGTTGAGATTCAGAAACAGGAGTCATCCACCAGCTAGACCTGAAGATCTCATCCATA TAACACACTACTCAATTTCTAATTAGACAAAATGTTTATGTGATGAGAAATTTTCTCTCT ATATGGCAAGAAACATAGCGATGATATGTATGCAGATCTTTTGTTTTCTTTCTTTTCCGA ATAACATCAACTACTCCTTTCATATTGTTTTAGACATCAATGCATCTGTTTTATAAAATT TAACTCCCTATTAAAGCTACATGGAATAAAGACTAATGAGATTTTTTTCTCAACAAATGT GAAATAGTCCTAATTTAGATGTAACAAAACAAATTCATGGCCAGAAACTGAATACTTATA TGGCCACATGGGGCAGAAATCAACAACTGACTTCTCCTTAAAACTTCACTTTTTTTTTTA TAAAGAGGTTGTGAACAACATTGTGGGTGAAGAAACATCATTCTAGTATTGAATGTTAGA AACGATTGATATTTCTTCATTGTTTAGATCAGAGGAAAATGAAGAAGCGAAAAAATAAGG CTATGGAACAAATTAGAGAAGCTTGTGTTAACTATGGTTTCTTCGAGATTGTGAATCACA GAAATCCTTTGGAGTTGTTGAGCACAAGTATGATGA