Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g115930.2.1
CDS Infomation

Calcium-binding EF-hand family protein (AHRD V3.3 *-* AT5G39670.1)
Sequence

ATGAAAAAGAAAACTCACGAAGAAATTGAGAAGGTTGTGTTAGACATCCTAAGCACATTT
CAAGATTTATCTTATTGTTTTTCTTTATCAATCCGAGCAATAGGTTGGTTCTTCATCATT
CTCCGAAACGCGTTGACTCGAGTTGATCATGATACTAATCCTCCCGATGCTAAAAATTGT
GGACATGATTATGAAAATTGCGATAACAAGGAAGAAATTGTTGAGGATAAACTAATGGGT
TTATGCAATTTAAATGAGAATGAAACAGAGTATGCAGAGGTTTCGAGTTTATTTGATGAA
GTAGAACCTAGTTTTGAGGAAATTAAAGAAGCTTTTGATGTGTTTGATGAAAATGGAGAT
GGATATATTGATGCAAGTGAGTTAATGAAACTTATTTGGAGAATGGGTTTATCCGAATTT
TCGATGGAGCATTGCAAGAAGATGATTATGGCCTTTGATGAAAACAGAGATGGAAAAATT
GAATTTTCTGAATTTTTGAAGCTCATGGAACAGAGCTTTCGGGATCCTGTAGCGTTAGAC
TGA

Peptide Sequence

PEP ID

Solyc03g115930.2.1
PEP Infomation

Calcium-binding EF-hand family protein (AHRD V3.3 *-* AT5G39670.1)
Sequence

MKKKTHEEIEKVVLDILSTFQDLSYCFSLSIRAIGWFFIILRNALTRVDHDTNPPDAKNC
GHDYENCDNKEEIVEDKLMGLCNLNENETEYAEVSSLFDEVEPSFEEIKEAFDVFDENGD
GYIDASELMKLIWRMGLSEFSMEHCKKMIMAFDENRDGKIEFSEFLKLMEQSFRDPVALD
*

Transcript Sequence

Transcript ID

Solyc03g115930.2.1
Transcript Infomation

Calcium-binding EF-hand family protein (AHRD V3.3 *-* AT5G39670.1)
Sequence

ATGAAAAAGAAAACTCACGAAGAAATTGAGAAGGTTGTGTTAGACATCCTAAGCACATTT
CAAGATTTATCTTATTGTTTTTCTTTATCAATCCGAGCAATAGGTTGGTTCTTCATCATT
CTCCGAAACGCGTTGACTCGAGTTGATCATGATACTAATCCTCCCGATGCTAAAAATTGT
GGACATGATTATGAAAATTGCGATAACAAGGAAGAAATTGTTGAGGATAAACTAATGGGT
TTATGCAATTTAAATGAGAATGAAACAGAGTATGCAGAGGTTTCGAGTTTATTTGATGAA
GTAGAACCTAGTTTTGAGGAAATTAAAGAAGCTTTTGATGTGTTTGATGAAAATGGAGAT
GGATATATTGATGCAAGTGAGTTAATGAAACTTATTTGGAGAATGGGTTTATCCGAATTT
TCGATGGAGCATTGCAAGAAGATGATTATGGCCTTTGATGAAAACAGAGATGGAAAAATT
GAATTTTCTGAATTTTTGAAGCTCATGGAACAGAGCTTTCGGGATCCTGTAGCGTTAGAC
TGA