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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g115920.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G14250.1)
Sequence

ATGGCAGACATAATATCAAATGTGTTCAATGAAAACGATGAGTTTAGCGCTCCCATACTA
TCAGACAACGAGTGCGCTGAGGAACTTCAATACCAAGAGGTTCTTGCAGCCTCTTTAGAA
ATCTTCAATCTTCACATGTCAACCACACAAATCGAAGAATCCCCTGAATCATCCCAAGGT
TTTTGTGAAATTTGTATGGAGACAAAAGCTACAAATGAAATGTTCAAACTCGAAAATTGT
TCTCGTCACTCATTCTGTACTGATTGCATAGCGCAATATGTCCAGTTCATGATTCAAGAC
CATATTTTCTCAGTAACTTGCCCTGGTTTGAAATGTTGCGCGACAATTGAACCTGTTTAT
TGTAAATCCATCATCCCTGAAAATGTATTCGAAAAATGGCAAGGGGGATTGAGTGAGTCT
TCTCTTCTTGAGTGCGAAAAGTTTTACTGTCCTTACAAAGATTGTTCAGAGCTGCTGATT
TATGATCATGATCAAGGCATCATTGAGTGTATATGTCCTGTATGCCACAGGCTGCTATGC
GCGGCGTGTGGCGTCCCTTGGCATACTGGACTTGATTGTGACAAGTTTCAAAATGATGAA
AAAAACAGAGAAGATGATTTAAAAGTTGAGGAACTTGCTAGCAGCTCAAAATGGATGAAA
TGCCCTCACTGCAAACATATTGTGCAGAAAGCTGATGGTTGTATACACATAACCTGCTGG
TGTGGATCTCAATTTTGCTATATATGTGGAGAAACATGGAGTGAAAACCATTGGAGATGT
CAAATTAGTGAATGA

Peptide Sequence

PEP ID

Solyc03g115920.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G14250.1)
Sequence

MADIISNVFNENDEFSAPILSDNECAEELQYQEVLAASLEIFNLHMSTTQIEESPESSQG
FCEICMETKATNEMFKLENCSRHSFCTDCIAQYVQFMIQDHIFSVTCPGLKCCATIEPVY
CKSIIPENVFEKWQGGLSESSLLECEKFYCPYKDCSELLIYDHDQGIIECICPVCHRLLC
AACGVPWHTGLDCDKFQNDEKNREDDLKVEELASSSKWMKCPHCKHIVQKADGCIHITCW
CGSQFCYICGETWSENHWRCQISE*

Transcript Sequence

Transcript ID

Solyc03g115920.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *** AT3G14250.1)
Sequence

TCACTATAAAACCCCTTTGCAGTACATCAAAATCAAATCAAGTAGTATCACAAACCTGCA
AAGTTCTCCAAGAATTCTTCTAAATTACTTCAACCACTGATCAATTCAATGGCAGACATA
ATATCAAATGTGTTCAATGAAAACGATGAGTTTAGCGCTCCCATACTATCAGACAACGAG
TGCGCTGAGGAACTTCAATACCAAGAGGTTCTTGCAGCCTCTTTAGAAATCTTCAATCTT
CACATGTCAACCACACAAATCGAAGAATCCCCTGAATCATCCCAAGGTTTTTGTGAAATT
TGTATGGAGACAAAAGCTACAAATGAAATGTTCAAACTCGAAAATTGTTCTCGTCACTCA
TTCTGTACTGATTGCATAGCGCAATATGTCCAGTTCATGATTCAAGACCATATTTTCTCA
GTAACTTGCCCTGGTTTGAAATGTTGCGCGACAATTGAACCTGTTTATTGTAAATCCATC
ATCCCTGAAAATGTATTCGAAAAATGGCAAGGGGGATTGAGTGAGTCTTCTCTTCTTGAG
TGCGAAAAGTTTTACTGTCCTTACAAAGATTGTTCAGAGCTGCTGATTTATGATCATGAT
CAAGGCATCATTGAGTGTATATGTCCTGTATGCCACAGGCTGCTATGCGCGGCGTGTGGC
GTCCCTTGGCATACTGGACTTGATTGTGACAAGTTTCAAAATGATGAAAAAAACAGAGAA
GATGATTTAAAAGTTGAGGAACTTGCTAGCAGCTCAAAATGGATGAAATGCCCTCACTGC
AAACATATTGTGCAGAAAGCTGATGGTTGTATACACATAACCTGCTGGTGTGGATCTCAA
TTTTGCTATATATGTGGAGAAACATGGAGTGAAAACCATTGGAGATGTCAAATTAGTGAA
TGATACCAGATTGCTTCTAAAGAACTGGGAAGATTGATAAAAGGCTAAATAATTCACCTA
ATTTTAAAAA