Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g115620.2.1
CDS Infomation

weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 *-* AT1G12150.2)
Sequence

ATGGGAGAGATCGATACGAAATCGATTGAATCAGTCCAAGCTGCACTTTCATTGTTCGGA
GAGAAATCCTGTGATCACAAGAAGAAATATAGATCCACTTCATGTATCAATGAGATGGAG
AAAGAAAAGGATACAGAAAGTGTGTTGAAATACTTGGCAAACCTCAAAATTCAACTTGAG
GCGAAGGATTCTGCACACAAGCAAGTACTTCTTAAGCTAGACCATCACGAAAATACAGTT
GATGAACTATGCACTCTGCTAATGAGCTCTGAACTCGAAAAGGAGATTTACATGATCGAA
TGTAAAGGGTTGAGGTTTCATGTACATGAGCTTGAGTCGAGAATTCAGGAGATGGATGAC
CAACTTTTGGAGTCTGTAATGATACGAGATCAGCTCTCACATGCCACCGATGAGTTAAAG
GCTACACAAAGAGAACTAGTGACAGCAACAGATGCTAAGATTGAAGCCTTGTCACAAGTA
GAAGTGATGGAAAATGCTTTGAGCATTGAAAAGTTAAAGACTGAAGAGCTATCGCGAGAT
GTGTCAAAGCTGAACGAGACTGTTGTGCACTTGAGAATGACAGCTACTACGGCAGAAGAG
AACGCTGCGCTTTTGGAATTAGAAGCAGCAAATGCAAAGGAAGAAGTGGCTTTTATGAGG
CATCAATTGGTAATGATGCAGGATTTAGAGAATGAGCTATTGGACAAGTTTGCACTTATT
GATTCAATGAAAGCAGAACTCCAAGAATTGAAAGAACTTCGCGCTTCTACTGAGAAAGCC
CCTTCATTTGCTGCTGCTTCTAGTGAGGTGAAAAAGTTAAATGAAGCTCTCGAATTACAA
GAGAGAAAGAATTGGGATCAGTCCGGTTATATCAGTCTATTGGAATCAGAACTCAGACAA
TTGAAAGGGGAACTGAACAAAGCCAACGAAGAGTCTACTCGTGCTAATGCAGACTTTGGA
ACAATTAACATTGAGCTGGATCAGATTAAAAAGGAAATGATTGAGACTAGAGAAAAGGAA
TCAGAAGCACAAGTTGAGATAGCATTCCTAAAATCCGAGCTTCACAAAGGGAAGTCGAAA
ATTGCAGCAGCAGAAGTTGCTGATTCAGTAGCCAAGAGTGAGAAATCAGCTTTACATCTC
GTGCTACAGCAGCTGGCCGTAGAGGCTGAAGAGGCTAAAAACGAAAACAGGAGACTAAAA
GAAGCCGGTAAGGCATTAGAAGAGGGAAAAGGAGAGGCCAAGGAGGAGTATGATCAGTTA
CATGATGAGCCAAATGAAATTCAAATACTGAAGAAAGAACTAAAAACAGCAACAGTGAAA
ATTAACGAGCTGAGGACGAGAGCTGAGCAGGCGATAAGCAGAGCTGAGGCAGCTGAAAAG
GGTAAATCGGCACTTGAAAATCAGATAAAGAGGTGGAAGGAACATAAAGAGAGAAAAAAG
GCTGCATTGGCAGCACTTAAAGAGGAGTCCATTTCCAGAGAAATCACTGAATACAAATCT
GATACTTCTTCGAAAACACTACAACCTCTTGGTAAGGTTCTCAAGATGAAGTTCTAG

Peptide Sequence

PEP ID

Solyc03g115620.2.1
PEP Infomation

weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 *-* AT1G12150.2)
Sequence

MGEIDTKSIESVQAALSLFGEKSCDHKKKYRSTSCINEMEKEKDTESVLKYLANLKIQLE
AKDSAHKQVLLKLDHHENTVDELCTLLMSSELEKEIYMIECKGLRFHVHELESRIQEMDD
QLLESVMIRDQLSHATDELKATQRELVTATDAKIEALSQVEVMENALSIEKLKTEELSRD
VSKLNETVVHLRMTATTAEENAALLELEAANAKEEVAFMRHQLVMMQDLENELLDKFALI
DSMKAELQELKELRASTEKAPSFAAASSEVKKLNEALELQERKNWDQSGYISLLESELRQ
LKGELNKANEESTRANADFGTINIELDQIKKEMIETREKESEAQVEIAFLKSELHKGKSK
IAAAEVADSVAKSEKSALHLVLQQLAVEAEEAKNENRRLKEAGKALEEGKGEAKEEYDQL
HDEPNEIQILKKELKTATVKINELRTRAEQAISRAEAAEKGKSALENQIKRWKEHKERKK
AALAALKEESISREITEYKSDTSSKTLQPLGKVLKMKF*

Transcript Sequence

Transcript ID

Solyc03g115620.2.1
Transcript Infomation

weak chloroplast movement under blue light protein (DUF827) (AHRD V3.3 *-* AT1G12150.2)
Sequence

TCTAAAATGTCATGTGTAATAGAATACCACTTATTATGAATAGTTGAAATTACTTTAAGT
AATTTAATAAAATAAGAAATTATTTTGACGTTTCATATTTTCTTACTCAACATTCAATGT
AGTAAATAAATCATATAAATTGAAATATGTTTAGTCACATATCATTAAAACCAAAATATT
GAAATAAGAATTTATCAATATTTCAAGTATATATTAAAAGAGGAACAAAATAAAATAATG
CAGTAAACAAACAAAACAAAGGTGCGCGCGCAAACAAAAGTTCAAAACGGCCGAATAATA
ACAATTTATATCAAAACATAGAACAAAGCTGTTTTGTATTTTTTTTTTTTCTGTATCAAC
AATGCTCCTCTGTTGTATTCTTCCTTCCACAGCAGCGACAGATATTATCGGATTTTCCGA
TTCTCTAATTCTTCCATGTTTATAAATCAAATCAAATTCTCAATCTTATTGCTTCGATCT
CATCAGGTAGTTTCTTCTTCATCTTTCTCAAATTTTAATTGAAGTTTTTTTTTTTCTTTT
GGAGATCCTGAGAAAAAAGGGTTTTTAATGGGAGAGATCGATACGAAATCGATTGAATCA
GTCCAAGCTGCACTTTCATTGTTCGGAGAGAAATCCTGTGATCACAAGAAGAAATATAGA
TCCACTTCATGTATCAATGAGATGGAGAAAGAAAAGGATACAGAAAGTGTGTTGAAATAC
TTGGCAAACCTCAAAATTCAACTTGAGGCGAAGGATTCTGCACACAAGCAAGTACTTCTT
AAGCTAGACCATCACGAAAATACAGTTGATGAACTATGCACTCTGCTAATGAGCTCTGAA
CTCGAAAAGGAGATTTACATGATCGAATGTAAAGGGTTGAGGTTTCATGTACATGAGCTT
GAGTCGAGAATTCAGGAGATGGATGACCAACTTTTGGAGTCTGTAATGATACGAGATCAG
CTCTCACATGCCACCGATGAGTTAAAGGCTACACAAAGAGAACTAGTGACAGCAACAGAT
GCTAAGATTGAAGCCTTGTCACAAGTAGAAGTGATGGAAAATGCTTTGAGCATTGAAAAG
TTAAAGACTGAAGAGCTATCGCGAGATGTGTCAAAGCTGAACGAGACTGTTGTGCACTTG
AGAATGACAGCTACTACGGCAGAAGAGAACGCTGCGCTTTTGGAATTAGAAGCAGCAAAT
GCAAAGGAAGAAGTGGCTTTTATGAGGCATCAATTGGTAATGATGCAGGATTTAGAGAAT
GAGCTATTGGACAAGTTTGCACTTATTGATTCAATGAAAGCAGAACTCCAAGAATTGAAA
GAACTTCGCGCTTCTACTGAGAAAGCCCCTTCATTTGCTGCTGCTTCTAGTGAGGTGAAA
AAGTTAAATGAAGCTCTCGAATTACAAGAGAGAAAGAATTGGGATCAGTCCGGTTATATC
AGTCTATTGGAATCAGAACTCAGACAATTGAAAGGGGAACTGAACAAAGCCAACGAAGAG
TCTACTCGTGCTAATGCAGACTTTGGAACAATTAACATTGAGCTGGATCAGATTAAAAAG
GAAATGATTGAGACTAGAGAAAAGGAATCAGAAGCACAAGTTGAGATAGCATTCCTAAAA
TCCGAGCTTCACAAAGGGAAGTCGAAAATTGCAGCAGCAGAAGTTGCTGATTCAGTAGCC
AAGAGTGAGAAATCAGCTTTACATCTCGTGCTACAGCAGCTGGCCGTAGAGGCTGAAGAG
GCTAAAAACGAAAACAGGAGACTAAAAGAAGCCGGTAAGGCATTAGAAGAGGGAAAAGGA
GAGGCCAAGGAGGAGTATGATCAGTTACATGATGAGCCAAATGAAATTCAAATACTGAAG
AAAGAACTAAAAACAGCAACAGTGAAAATTAACGAGCTGAGGACGAGAGCTGAGCAGGCG
ATAAGCAGAGCTGAGGCAGCTGAAAAGGGTAAATCGGCACTTGAAAATCAGATAAAGAGG
TGGAAGGAACATAAAGAGAGAAAAAAGGCTGCATTGGCAGCACTTAAAGAGGAGTCCATT
TCCAGAGAAATCACTGAATACAAATCTGATACTTCTTCGAAAACACTACAACCTCTTGGT
AAGGTTCTCAAGATGAAGTTCTAGTTTTACACCAATCTATTGCATAACTTATCCATATGA
ATATCAATGATATCCACAATCATCCTATGGACGATAGTAGTACATAAGTGACGCTTTCCT
CTTCAGTACCAATCATAATTACCTCTCGTAAAGATAGAAGAAAGAAAGCTGTCATCGGTA
TATCTTTGAAAGCTCAAACGGAGGGAATAAACAGACTCCTCTAAGGCTACTGAAGCCACT
TTAGTGCAAAAAAAGGTTTTTATGTAATGTATAATTTTGCTAGTATGAAAAATGATAGTA
CAATGTGATTTATTGATCTTGTTATAACTTCTATATCACACTCTCTTGTTACTTGTTTTT
GGTTTAAAATTAGATATAGTATTTAAACATACTATGTATGTTGGGAATGTTAATACCAAC
TCAATGGAGAAAAAGTTATAATTAGGAAGAATTTTATGAGTGATTGAAGGGAAGGATAAT
CCTTGAACAAATTATTTT