Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g115300.2.1
CDS Infomation

Expansin (AHRD V3.3 *** Q9ZTG7_SOLLC)
Sequence

ATGGCTAAACACCAAAGTCTCTTCATTTTGTTCATCACGTTTGTTGTTTTTTTTCTAGTT
GATGCATTTGAAAGTAAAGAGGTAGAAGGAAATTTGGATGAACAGGTATGGAATAATGCA
CGTGCTACATTTTATGGTGACATGGGGGGTGGTCAAACGATGCAGGGAGCTTGTGGTTAT
GGAGACACAATCAAACAAGGGTATGGCCTAGAAACAACAGCACTAAGCACAGCACTCTTT
AACAAAGGATCTACCTGTGGAGCTTGCTATCAAATAAAGTGTGTCAATGCTCCTAAAGCA
TGCCATCCAGACCAAGTCATAATTGTTACTGCCACCAATTTATGCCCTCCAAATTCCAAA
AAAACTAATGACGATTGGTGCAATCCACCACAAAAACACTTTGATCTGACAATGCCTATG
TTCATAAAGATTGCAGAGCAAACAGCAGGGGTTGTACCAGTTGTTTACAGAAGAGTCACT
TGCCAGAAAAAAGGAGGTCTCAAGTTTGAGATCGCCGGGAATCCCAATTGGATTCTTGTT
CTTGTTTTCAACGTGGGAGGTGTTGGAGATGTTGTCAATGTCAAAATCAAAGGATCTAAG
ACTCAATGGATACCAATGTCGCGGAATTGGGGACAAAATTGGCAGGCTAATGTGCAGTTG
GGAGGACAAAGCTTGTCTTTCCAAGTACAAACTAGCGATGGCAAATGGGTTCAATCTGAT
AATGTTGCTCCGGATAACTGGCAATATGGTCAGACATTTGAAGCCAAGAATAATTTTTAA

Peptide Sequence

PEP ID

Solyc03g115300.2.1
PEP Infomation

Expansin (AHRD V3.3 *** Q9ZTG7_SOLLC)
Sequence

MAKHQSLFILFITFVVFFLVDAFESKEVEGNLDEQVWNNARATFYGDMGGGQTMQGACGY
GDTIKQGYGLETTALSTALFNKGSTCGACYQIKCVNAPKACHPDQVIIVTATNLCPPNSK
KTNDDWCNPPQKHFDLTMPMFIKIAEQTAGVVPVVYRRVTCQKKGGLKFEIAGNPNWILV
LVFNVGGVGDVVNVKIKGSKTQWIPMSRNWGQNWQANVQLGGQSLSFQVQTSDGKWVQSD
NVAPDNWQYGQTFEAKNNF*

Transcript Sequence

Transcript ID

Solyc03g115300.2.1
Transcript Infomation

Expansin (AHRD V3.3 *** Q9ZTG7_SOLLC)
Sequence

ATGGCTAAACACCAAAGTCTCTTCATTTTGTTCATCACGTTTGTTGTTTTTTTTCTAGTT
GATGCATTTGAAAGTAAAGAGGTAGAAGGAAATTTGGATGAACAGGTATGGAATAATGCA
CGTGCTACATTTTATGGTGACATGGGGGGTGGTCAAACGATGCAGGGAGCTTGTGGTTAT
GGAGACACAATCAAACAAGGGTATGGCCTAGAAACAACAGCACTAAGCACAGCACTCTTT
AACAAAGGATCTACCTGTGGAGCTTGCTATCAAATAAAGTGTGTCAATGCTCCTAAAGCA
TGCCATCCAGACCAAGTCATAATTGTTACTGCCACCAATTTATGCCCTCCAAATTCCAAA
AAAACTAATGACGATTGGTGCAATCCACCACAAAAACACTTTGATCTGACAATGCCTATG
TTCATAAAGATTGCAGAGCAAACAGCAGGGGTTGTACCAGTTGTTTACAGAAGAGTCACT
TGCCAGAAAAAAGGAGGTCTCAAGTTTGAGATCGCCGGGAATCCCAATTGGATTCTTGTT
CTTGTTTTCAACGTGGGAGGTGTTGGAGATGTTGTCAATGTCAAAATCAAAGGATCTAAG
ACTCAATGGATACCAATGTCGCGGAATTGGGGACAAAATTGGCAGGCTAATGTGCAGTTG
GGAGGACAAAGCTTGTCTTTCCAAGTACAAACTAGCGATGGCAAATGGGTTCAATCTGAT
AATGTTGCTCCGGATAACTGGCAATATGGTCAGACATTTGAAGCCAAGAATAATTTTTAA
TCATCATGTATTTTCGAAAATGAGTAGCTTTTAGTTTCTAATCAATATAATTTATGATCT
TTTCTCTAAGTTTTTTTCCCGAATAAATTCTTTATATTTGAGTTGATATTATTGAGC