Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g114965.1.1
CDS Infomation

Galactose oxidase/kelch repeat superfamily protein (AHRD V3.3 *** AT1G18610.2)
Sequence

ATGAGATGGGAAAGGGTGTCTGTACATGGAGGTGGTGGGCCTGGTAAAAAGTGGGGACAC
ACCTGTAGCGCTGTCGTAGGAGGTAGACTTCTCTATGTCTTTGGTGGTTTTGGTGATGAT
AACAGGCATACTAATAAAGTTCACGTCTTTGACAATGTTAATAGAATTTGGAGTGAGCCA
GTGACAAAGGGAACTTTGCCTTCACCAAGGGACAGCCACAGTTGTACAGCAGTTGGAGAT
AATTTGTTTGTGTTCGGGGGCACAAATGGGACAAATTCTCTTAACGATTTATACATTTTG
GACACCTCTTCGAATACATGGATAGCACCCAGTCTAAGAGGTGATCCCCCTAATCCAAGG
GAAGGCCACAGTGCAGCACTCATTGGTAAACGGCTTTTCATATTTGGCGGATGTGGCAAC
ATTGATGGCACTGAAATATTCTATGATGACGTTTACGTACTGAATACAGAGACACTTATG
TGGAAACGCATTATGCCATCAGGCATTCCGCCAAGTAAACGCGAGAGCCATTCCTGTTCA
TCTTGGAACAATAAGATCATTATCATAGGTGGTCAAGACACATCTAGCTTTTATCAGTCA
GATGTTCATATACTTGACACAGATACCCTGAGCTGGTCCAAGTTGAACACTAAGGGCCAG
ATTTTGCCACCGCGAGCTGGGCATACAACCATTTCATTGGGCAGGCACCTGTTTGTCTTT
GGGGGTTTCGCTGATAACCAGAGCCTATTTGACGACGTTTACGTGCTTGATGTTGCTTCT
GGTACATGGAGTGAGGTCGAGCTCACTGGTGAGGGCCCATCCCCCAGATTCTCAGTAGCT
GGGGATTGTTTAGATCCACATGTGGGAGGTACTCTTGTATTGATAGGTGGTTGTAATAAC
ACACTTCAACCCTTGGAGGACATGTATTATCTACAAACAGGCATTGTTAGAGAGGATGAA
CGAGACGAAAGAAGGATAGCGAAATTGTCTTTGAGAAAGCAATTGAAGCTGAAATGCCAG
AAGCAACAAGCTTCAGCTTCTCCCGGCGATAATTCTTTTGAACGATTTGATAATAACGCT
AATGTTCATCATCAAATGCCTGTGAACTATACACAGCCAAGTCGACATAATGTTTATTCA
AATGAATACCAGACTCCTCTGAGGACGAAGACATTTCAAGCCATGGTCACAAAGAGTTTT
CCAAATGGCTATACCGTTGAAACTGTTATTGATGGAAAACCCCTTCGTGGATTAGTATTT
TCCTCCAAACCAAGACCTGAACAGACTCCCTGTAATGATCCTATCAGGAATATGGGAAAT
GGTGAAACTGATAGAGAAAAGCAGAATGGCGACCATAATTCTGTTAGAGAAGCTACAAGA
CCTTCAGAAACCAATGTGAGCGACTTCCAGCAAGCAGATATCTTAGGTGGGAATTCTATC
AGAAATGAGCCTCCAGTTGGAGGTGCTACAGCTCAAATGGAGAGTCCGTTGACCTCTTAT
GCTCCACCTGCCCATGAGGTTCGTAATGTGTCCGATGTTGTGAATTTGGGAAGTGGTATG
CTTACTGATGCAGTCGATGGTGGTACTAAGGTGTCTAAGGAGAATTCTTCTGCAACTAAT
GACTCTTGA

Peptide Sequence

PEP ID

Solyc03g114965.1.1
PEP Infomation

Galactose oxidase/kelch repeat superfamily protein (AHRD V3.3 *** AT1G18610.2)
Sequence

MRWERVSVHGGGGPGKKWGHTCSAVVGGRLLYVFGGFGDDNRHTNKVHVFDNVNRIWSEP
VTKGTLPSPRDSHSCTAVGDNLFVFGGTNGTNSLNDLYILDTSSNTWIAPSLRGDPPNPR
EGHSAALIGKRLFIFGGCGNIDGTEIFYDDVYVLNTETLMWKRIMPSGIPPSKRESHSCS
SWNNKIIIIGGQDTSSFYQSDVHILDTDTLSWSKLNTKGQILPPRAGHTTISLGRHLFVF
GGFADNQSLFDDVYVLDVASGTWSEVELTGEGPSPRFSVAGDCLDPHVGGTLVLIGGCNN
TLQPLEDMYYLQTGIVREDERDERRIAKLSLRKQLKLKCQKQQASASPGDNSFERFDNNA
NVHHQMPVNYTQPSRHNVYSNEYQTPLRTKTFQAMVTKSFPNGYTVETVIDGKPLRGLVF
SSKPRPEQTPCNDPIRNMGNGETDREKQNGDHNSVREATRPSETNVSDFQQADILGGNSI
RNEPPVGGATAQMESPLTSYAPPAHEVRNVSDVVNLGSGMLTDAVDGGTKVSKENSSATN
DS*

Transcript Sequence

Transcript ID

Solyc03g114965.1.1
Transcript Infomation

Galactose oxidase/kelch repeat superfamily protein (AHRD V3.3 *** AT1G18610.2)
Sequence

ATGAGATGGGAAAGGGTGTCTGTACATGGAGGTGGTGGGCCTGGTAAAAAGTGGGGACAC
ACCTGTAGCGCTGTCGTAGGAGGTAGACTTCTCTATGTCTTTGGTGGTTTTGGTGATGAT
AACAGGCATACTAATAAAGTTCACGTCTTTGACAATGTTAATAGAATTTGGAGTGAGCCA
GTGACAAAGGGAACTTTGCCTTCACCAAGGGACAGCCACAGTTGTACAGCAGTTGGAGAT
AATTTGTTTGTGTTCGGGGGCACAAATGGGACAAATTCTCTTAACGATTTATACATTTTG
GACACCTCTTCGAATACATGGATAGCACCCAGTCTAAGAGGTGATCCCCCTAATCCAAGG
GAAGGCCACAGTGCAGCACTCATTGGTAAACGGCTTTTCATATTTGGCGGATGTGGCAAC
ATTGATGGCACTGAAATATTCTATGATGACGTTTACGTACTGAATACAGAGACACTTATG
TGGAAACGCATTATGCCATCAGGCATTCCGCCAAGTAAACGCGAGAGCCATTCCTGTTCA
TCTTGGAACAATAAGATCATTATCATAGGTGGTCAAGACACATCTAGCTTTTATCAGTCA
GATGTTCATATACTTGACACAGATACCCTGAGCTGGTCCAAGTTGAACACTAAGGGCCAG
ATTTTGCCACCGCGAGCTGGGCATACAACCATTTCATTGGGCAGGCACCTGTTTGTCTTT
GGGGGTTTCGCTGATAACCAGAGCCTATTTGACGACGTTTACGTGCTTGATGTTGCTTCT
GGTACATGGAGTGAGGTCGAGCTCACTGGTGAGGGCCCATCCCCCAGATTCTCAGTAGCT
GGGGATTGTTTAGATCCACATGTGGGAGGTACTCTTGTATTGATAGGTGGTTGTAATAAC
ACACTTCAACCCTTGGAGGACATGTATTATCTACAAACAGGCATTGTTAGAGAGGATGAA
CGAGACGAAAGAAGGATAGCGAAATTGTCTTTGAGAAAGCAATTGAAGCTGAAATGCCAG
AAGCAACAAGCTTCAGCTTCTCCCGGCGATAATTCTTTTGAACGATTTGATAATAACGCT
AATGTTCATCATCAAATGCCTGTGAACTATACACAGCCAAGTCGACATAATGTTTATTCA
AATGAATACCAGACTCCTCTGAGGACGAAGACATTTCAAGCCATGGTCACAAAGAGTTTT
CCAAATGGCTATACCGTTGAAACTGTTATTGATGGAAAACCCCTTCGTGGATTAGTATTT
TCCTCCAAACCAAGACCTGAACAGACTCCCTGTAATGATCCTATCAGGAATATGGGAAAT
GGTGAAACTGATAGAGAAAAGCAGAATGGCGACCATAATTCTGTTAGAGAAGCTACAAGA
CCTTCAGAAACCAATGTGAGCGACTTCCAGCAAGCAGATATCTTAGGTGGGAATTCTATC
AGAAATGAGCCTCCAGTTGGAGGTGCTACAGCTCAAATGGAGAGTCCGTTGACCTCTTAT
GCTCCACCTGCCCATGAGGTTCGTAATGTGTCCGATGTTGTGAATTTGGGAAGTGGTATG
CTTACTGATGCAGTCGATGGTGGTACTAAGGTGTCTAAGGAGAATTCTTCTGCAACTAAT
GACTCTTGAATCCTTTATTTAAGAATCAAACAGCTTGGAAAAAGATTTTCTCAATCAAAT
TATTTGAGATAAGAATCAATGTAACACCGATTAGCCTTGTGCAATTTTATGGAGATGGCG
GAGGGAATTAATTCACTTCATCTCTACAGTCTGCTTGAGGATATTATAGTTTCATTTTCC
TTAGGTTTGATATTTCTGGGTAAAGATTCCCAATGAATTTATATGAAAAAAAAAAAATCA
TATCGACTGCGGTGTTGTGGTCACCAGCTTAGCTAATAGTAGAAGCTTTAGTGAAATTCA
AGGAGACAACTTTACTAATCACCTGTTAAACTGTTTTTAATTAACTATGAAGTGCTTATC
TGCCTCCCTAGCCTCTTTTCATTATCAATTTTTT