Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g114960.3.1
CDS Infomation

ABC transporter B family protein (AHRD V3.3 *** A0A072URQ8_MEDTR)
Sequence

ATGGATTGCCAATTAGGAGTGCAGGGCCATGGCTTCGGTAATGCCAGAACTCCTTTGTTA
GACAGACCTGCTTTAGGGAGAAAGAGAAATGATGCTGGAGATGGTCAGTTGGGAGACCTT
GAGCATGGTGATTCTGTTCCGGCACCAAATGTTGGATTTGGCAGAGTTATTTCACTTGCG
AAGCCTGAAGCAGGAAGTTTGGTATTGGCGACAATTGCTTTGCTGTTTGCAGCAACATCA
AGCATTTTGATTCCAAAATTTGGGGGAAAGATAATTGATATTGTTTCAGGTGATATCCAA
ACACCTGAACAGAAATCAGAAGCTTTAAATGCAGTCAAGAACACAATACTTGAAATCTTT
CTGATTGTCATTGTTGGTTCTGTTTGCACAGCACTTCGAGCATGGTTATTCTCTTCTGCT
AGTGAAAGGGTTGTAGCCAGGTTGAGAAAGAACTTGCTAAGTCACCTTGTTCACCAGGAG
ATAGCTTTCTTCGATGTTACTCGAACTGGGGAGCTCCTCAGTAGGCTATCTGAAGATACC
CAGATCATAAAGAATGCCGCAACTACTAATCTTTCAGAGGCTTTGAGGAATCTTGCTACT
GCATTTATTGGTCTTGGATTTATGTTTCAAACATCATGGAAATTAACATTGTTGTCGCTA
GCTGTTGTACCAGTCATATCAGTTGCAGTACGCAGATTTGGTCGCTACATGCGTGAGCTT
TCCCACAAAACTCAAGCTGCTGCAGCAGTAGCCTCGTCCATTGCTGAGGAAACTTTTGGC
GCCATACGGACAGTGAGATCATTTGCGCAGGAAGATTATGAGATTTCACGCTATTCGGAG
AAAGTTGACGAGACCTTAAATCTTGGGCTTGGACAAGCTAAAGTGGTTGGCCTTTTCTCT
GGAAGCTTAAGTGCTGCATCTACTCTATCAGTTATTGTAGTAGTAATATATGGAGCCACT
CTGACTATCCAAGGCGCGATGACACCTGGAGCTCTTACATCCTTTATACTCTATAGCTTA
ACAGTTGGATCATCCGTATCTGGACTTTCTGGATTATATACTGTAGCAATGAAAGCTGCT
GGAGCCAGCAGACGGGTTTTTCAGATCTTGGATCGCACATCATCCATGCCAAAATCAGGA
GACCTATGTCCAATGGGTGATCAAGCTGCAGAGGTAGAACTGGATGATGTCTGGTTTGCC
TATCCATCCCGTCCTAGCCACATGGTCCTCAAGGGTATAACAATGAAGCTACAATCTGGT
TCAAAGGTTGCACTGGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGCAAATTTGATA
GAGAGATTCTATGATCCTGTTAAAGGGAAGATCTTGCTCAATGGGGTTTCTCTGGTTGAA
ATATCTCATAAGCACCTACACCATAAGGTTAGTATAGTGAGCCAGGAACCTGTTCTTTTC
AACTGTTCCATTGAAGAAAATATTGCCTATGGATTGGGCGGCAAAGCAAGCAGTGAAGAT
ATAGAAAAAGCAGCTAAAATGGCCAATGCTCATGAATTTGTATCCAAATTTCCCGAAAAA
TATCAAACCCATGTCGGAGAACGAGGATTAAGACTTTCTGGTGGTCAGAAACAGAGAATA
GCCATAGCTAGAGCACTACTGATGAACCCTACAATTTTATTGTTGGACGAGGCCACGAGT
GCTCTGGATGCTGAAAGTGAATATCTAGTTCAGGATGCCATGGATTCCCTGATGCAAGGT
AGAACCGTTCTTGTCATAGCTCACAGGCTTTCAACAGTCAAGAGCGCGAACACTGTAGCT
GTTATTTCGGATGGTCAAATAGTGGAAAGTGGCACACATGATGACCTTCTGAACAAGAAT
GGGATCTATACAGCACTTGTGAGGAGGCAGTTGCAGGGATACAAATCTGATAGCTAA

Peptide Sequence

PEP ID

Solyc03g114960.3.1
PEP Infomation

ABC transporter B family protein (AHRD V3.3 *** A0A072URQ8_MEDTR)
Sequence

MDCQLGVQGHGFGNARTPLLDRPALGRKRNDAGDGQLGDLEHGDSVPAPNVGFGRVISLA
KPEAGSLVLATIALLFAATSSILIPKFGGKIIDIVSGDIQTPEQKSEALNAVKNTILEIF
LIVIVGSVCTALRAWLFSSASERVVARLRKNLLSHLVHQEIAFFDVTRTGELLSRLSEDT
QIIKNAATTNLSEALRNLATAFIGLGFMFQTSWKLTLLSLAVVPVISVAVRRFGRYMREL
SHKTQAAAAVASSIAEETFGAIRTVRSFAQEDYEISRYSEKVDETLNLGLGQAKVVGLFS
GSLSAASTLSVIVVVIYGATLTIQGAMTPGALTSFILYSLTVGSSVSGLSGLYTVAMKAA
GASRRVFQILDRTSSMPKSGDLCPMGDQAAEVELDDVWFAYPSRPSHMVLKGITMKLQSG
SKVALVGPSGGGKTTIANLIERFYDPVKGKILLNGVSLVEISHKHLHHKVSIVSQEPVLF
NCSIEENIAYGLGGKASSEDIEKAAKMANAHEFVSKFPEKYQTHVGERGLRLSGGQKQRI
AIARALLMNPTILLLDEATSALDAESEYLVQDAMDSLMQGRTVLVIAHRLSTVKSANTVA
VISDGQIVESGTHDDLLNKNGIYTALVRRQLQGYKSDS*

Transcript Sequence

Transcript ID

Solyc03g114960.3.1
Transcript Infomation

ABC transporter B family protein (AHRD V3.3 *** A0A072URQ8_MEDTR)
Sequence

TTTTATATAGTCTATACATAAATACAAATATAAAACTCAGCAGCCATTTCACCATTCCAC
TACCACACTTTCTTCTGTTTTTTGAAAAAGCCATATCTGTGACCACCACACTTACACTCA
CAATTAATCCATGGATTGCCAATTAGGAGTGCAGGGCCATGGCTTCGGTAATGCCAGAAC
TCCTTTGTTAGACAGACCTGCTTTAGGGAGAAAGAGAAATGATGCTGGAGATGGTCAGTT
GGGAGACCTTGAGCATGGTGATTCTGTTCCGGCACCAAATGTTGGATTTGGCAGAGTTAT
TTCACTTGCGAAGCCTGAAGCAGGAAGTTTGGTATTGGCGACAATTGCTTTGCTGTTTGC
AGCAACATCAAGCATTTTGATTCCAAAATTTGGGGGAAAGATAATTGATATTGTTTCAGG
TGATATCCAAACACCTGAACAGAAATCAGAAGCTTTAAATGCAGTCAAGAACACAATACT
TGAAATCTTTCTGATTGTCATTGTTGGTTCTGTTTGCACAGCACTTCGAGCATGGTTATT
CTCTTCTGCTAGTGAAAGGGTTGTAGCCAGGTTGAGAAAGAACTTGCTAAGTCACCTTGT
TCACCAGGAGATAGCTTTCTTCGATGTTACTCGAACTGGGGAGCTCCTCAGTAGGCTATC
TGAAGATACCCAGATCATAAAGAATGCCGCAACTACTAATCTTTCAGAGGCTTTGAGGAA
TCTTGCTACTGCATTTATTGGTCTTGGATTTATGTTTCAAACATCATGGAAATTAACATT
GTTGTCGCTAGCTGTTGTACCAGTCATATCAGTTGCAGTACGCAGATTTGGTCGCTACAT
GCGTGAGCTTTCCCACAAAACTCAAGCTGCTGCAGCAGTAGCCTCGTCCATTGCTGAGGA
AACTTTTGGCGCCATACGGACAGTGAGATCATTTGCGCAGGAAGATTATGAGATTTCACG
CTATTCGGAGAAAGTTGACGAGACCTTAAATCTTGGGCTTGGACAAGCTAAAGTGGTTGG
CCTTTTCTCTGGAAGCTTAAGTGCTGCATCTACTCTATCAGTTATTGTAGTAGTAATATA
TGGAGCCACTCTGACTATCCAAGGCGCGATGACACCTGGAGCTCTTACATCCTTTATACT
CTATAGCTTAACAGTTGGATCATCCGTATCTGGACTTTCTGGATTATATACTGTAGCAAT
GAAAGCTGCTGGAGCCAGCAGACGGGTTTTTCAGATCTTGGATCGCACATCATCCATGCC
AAAATCAGGAGACCTATGTCCAATGGGTGATCAAGCTGCAGAGGTAGAACTGGATGATGT
CTGGTTTGCCTATCCATCCCGTCCTAGCCACATGGTCCTCAAGGGTATAACAATGAAGCT
ACAATCTGGTTCAAAGGTTGCACTGGTTGGTCCAAGTGGTGGTGGAAAGACTACAATAGC
AAATTTGATAGAGAGATTCTATGATCCTGTTAAAGGGAAGATCTTGCTCAATGGGGTTTC
TCTGGTTGAAATATCTCATAAGCACCTACACCATAAGGTTAGTATAGTGAGCCAGGAACC
TGTTCTTTTCAACTGTTCCATTGAAGAAAATATTGCCTATGGATTGGGCGGCAAAGCAAG
CAGTGAAGATATAGAAAAAGCAGCTAAAATGGCCAATGCTCATGAATTTGTATCCAAATT
TCCCGAAAAATATCAAACCCATGTCGGAGAACGAGGATTAAGACTTTCTGGTGGTCAGAA
ACAGAGAATAGCCATAGCTAGAGCACTACTGATGAACCCTACAATTTTATTGTTGGACGA
GGCCACGAGTGCTCTGGATGCTGAAAGTGAATATCTAGTTCAGGATGCCATGGATTCCCT
GATGCAAGGTAGAACCGTTCTTGTCATAGCTCACAGGCTTTCAACAGTCAAGAGCGCGAA
CACTGTAGCTGTTATTTCGGATGGTCAAATAGTGGAAAGTGGCACACATGATGACCTTCT
GAACAAGAATGGGATCTATACAGCACTTGTGAGGAGGCAGTTGCAGGGATACAAATCTGA
TAGCTAA