Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g114890.3.1
CDS Infomation

COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)
Sequence

ATGTCCTTGAACTCATATACCATAGTGTTTCTGTTTTTTGTGCTATGTTCTCGTTCAGCT
GCATATGACGCATTGGATCCAAATGGAAATATAACAATCAAATGGGATGTGATATCTTGG
ACCCCTGATGGTTATGTGGCAGTAGTGACAATGAACAATTTCCAAATGTATCGTCCAATT
GTGAGCCCTGGATGGACTTTAGGATGGACATGGGCAAAGAATGAGGTGATTTGGGCCATG
ATGGGAGCACAAGCTACAGATCAAGGGGATTGTTCAAAGTTCAGAGGCAACATTCCTCAC
AGCTGTGAGAAAAAGCCTGCAATTGTTGACTTGCTGCCAAATACCCCTTATAACCAGCAA
ATTGCTAACTGCTGTAAAGGCGGCGTTATAGCATCGATGGGAAAGGACTCTTCTGCTGCT
CTTTCTGCATTTCAGATAGCCGTAGGCGCTGCTGGGACTACAAACAGGACAGTGAAACTT
CCTAAAAATTTCACTTTTGTTGCTCCAGGTGGTGGCTATACTTGTGGTCCTGCTAAAATC
ATCCGTCCCACTCGTTTCATAACACCTGACGGTCGAAGAATAACACAGGCTATGAGTAAG
TCTTTTAAACCATACATTGAAATGACATGGAGAGTGGTTTGCACTTACTCTCAGTTCATA
GCATCCCCCAAACCGACATGTTGTGTCTCCTTGTCTTCTTTTCACAATGCAAGTGTCACC
CCTTGTCCTTCGTGTTCTTGTGGCTGCCGTAAAAGTAGCAACTGTGTCATGAAAGGAGTA
AATAAGCCAGTGCTGCAATGCACAAAACACATGTGCCCTGTCAACGTGCATTGGCATGTT
AAATCAAACTACAACAAGTATTGGAATGTGAAGATGACCATCACAAACTTCAACTACCGA
TTCAACTATACACATTGGACACTCGTCGTTCAACATCCAAACCTCAACAAAGCAACTAAA
GTTTCCAGCTTTGTATACAAGCCTCTCATGCCCAATTTATCAACCAATGATACAGCCTTG
TTTTATGGGAGAAAGGCATATAATGATGTCCTGATGCAAGCTGGACCAAAAGGAAATGTC
CACTCAGATTTAACACTTGAGAAGGACAGAAAAACACTTGCACTGAAGAAAGGTTGGGCT
TTCCCTCGAAGGGTCTACTTCAACGGCAATCCTTGTGTGATGCCATCTCCTGAATCTTGC
CCATATCTTCCAAATTCTGCCGGCGCCAAATAA

Peptide Sequence

PEP ID

Solyc03g114890.3.1
PEP Infomation

COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)
Sequence

MSLNSYTIVFLFFVLCSRSAAYDALDPNGNITIKWDVISWTPDGYVAVVTMNNFQMYRPI
VSPGWTLGWTWAKNEVIWAMMGAQATDQGDCSKFRGNIPHSCEKKPAIVDLLPNTPYNQQ
IANCCKGGVIASMGKDSSAALSAFQIAVGAAGTTNRTVKLPKNFTFVAPGGGYTCGPAKI
IRPTRFITPDGRRITQAMSKSFKPYIEMTWRVVCTYSQFIASPKPTCCVSLSSFHNASVT
PCPSCSCGCRKSSNCVMKGVNKPVLQCTKHMCPVNVHWHVKSNYNKYWNVKMTITNFNYR
FNYTHWTLVVQHPNLNKATKVSSFVYKPLMPNLSTNDTALFYGRKAYNDVLMQAGPKGNV
HSDLTLEKDRKTLALKKGWAFPRRVYFNGNPCVMPSPESCPYLPNSAGAK*

Transcript Sequence

Transcript ID

Solyc03g114890.3.1
Transcript Infomation

COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO)
Sequence

AATAGATACAATGACATAGATATGAGCAATTGCATCTCAAACTAGGGAAAATATATTGAT
GTAACGAGATATTCTGTTGTGAAGACCGATAGATATTATAGAGAAGCTTAACATAATTTC
TATTACACTATCCAACATGTCCTTGAACTCATATACCATAGTGTTTCTGTTTTTTGTGCT
ATGTTCTCGTTCAGCTGCATATGACGCATTGGATCCAAATGGAAATATAACAATCAAATG
GGATGTGATATCTTGGACCCCTGATGGTTATGTGGCAGTAGTGACAATGAACAATTTCCA
AATGTATCGTCCAATTGTGAGCCCTGGATGGACTTTAGGATGGACATGGGCAAAGAATGA
GGTGATTTGGGCCATGATGGGAGCACAAGCTACAGATCAAGGGGATTGTTCAAAGTTCAG
AGGCAACATTCCTCACAGCTGTGAGAAAAAGCCTGCAATTGTTGACTTGCTGCCAAATAC
CCCTTATAACCAGCAAATTGCTAACTGCTGTAAAGGCGGCGTTATAGCATCGATGGGAAA
GGACTCTTCTGCTGCTCTTTCTGCATTTCAGATAGCCGTAGGCGCTGCTGGGACTACAAA
CAGGACAGTGAAACTTCCTAAAAATTTCACTTTTGTTGCTCCAGGTGGTGGCTATACTTG
TGGTCCTGCTAAAATCATCCGTCCCACTCGTTTCATAACACCTGACGGTCGAAGAATAAC
ACAGGCTATGAGTAAGTCTTTTAAACCATACATTGAAATGACATGGAGAGTGGTTTGCAC
TTACTCTCAGTTCATAGCATCCCCCAAACCGACATGTTGTGTCTCCTTGTCTTCTTTTCA
CAATGCAAGTGTCACCCCTTGTCCTTCGTGTTCTTGTGGCTGCCGTAAAAGTAGCAACTG
TGTCATGAAAGGAGTAAATAAGCCAGTGCTGCAATGCACAAAACACATGTGCCCTGTCAA
CGTGCATTGGCATGTTAAATCAAACTACAACAAGTATTGGAATGTGAAGATGACCATCAC
AAACTTCAACTACCGATTCAACTATACACATTGGACACTCGTCGTTCAACATCCAAACCT
CAACAAAGCAACTAAAGTTTCCAGCTTTGTATACAAGCCTCTCATGCCCAATTTATCAAC
CAATGATACAGCCTTGTTTTATGGGAGAAAGGCATATAATGATGTCCTGATGCAAGCTGG
ACCAAAAGGAAATGTCCACTCAGATTTAACACTTGAGAAGGACAGAAAAACACTTGCACT
GAAGAAAGGTTGGGCTTTCCCTCGAAGGGTCTACTTCAACGGCAATCCTTGTGTGATGCC
ATCTCCTGAATCTTGCCCATATCTTCCAAATTCTGCCGGCGCCAAATAA