Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g114600.3.1
CDS Infomation

Alternaria stem canker resistance
Sequence

ATGAAAAACCTGGATCACATCGCTGCTTCGGTTGATTGGGAGAAAGAGTCTCTCCCTGAG
TACCAGGATTTGATATTTCTCTTATTTTTTGCTCTCTTCTTCCCCGTTCTTCGATTCATA
CTCGACAGATTTGTTTTCGAGGCATTGGCTAAGCGTATGATTTTTGGAAAGAAGACGGTT
GTAAATATTAACGGTCGTGAAGAGAGGAAGAAGATCAACAAATTCAAAGAGTCAGCATGG
AAATTTGTATATTTTCTATCTACTGAGCTACTTGCACTTTCTGTGACTTGTAATGAGCCT
TGGTTCACAGATAGTCGGTATTTCTGGGCAGGACCTGGAGATGTGGTTTGGCCTAATTTG
AAAATGAAATTAAAGCTAAAATTATTGTACATGTATGCTGGAGGATTCTACTTTTACTCC
ATATTCGCAACACTTTATTGGGAAACAAGACGCTATGATTTTGCTGCGCAGATAATTCAT
CATGTAACAACAGTGTCACTCATTGTGTTGTCTTACGTATACGGGTTTGCGCGTATTGGA
TCAGTGGTTCTAGCACTTCATGACGGAAGTGATGTATTCATGGAAATTGCAAAGATGTCG
AAATACAGTGGCTTTGATTTGATTGCTGATATTTTCTTCTCTCTTTTCGCGTTGGTTTTT
ACATCACTTCGTATAATCTGCTATCCCTTCTGGATAATCCGAAGCACATGCTACGAACTT
CTTTATGTATTGGATATACAGAAGGAACGGACTACTGGGATCATACTTTACTTTGTTTTC
AATGCATTGCTGATATGCTTGCTGGTTCTTCACCTCTTTTGGTTCAAAATCATACTGCGG
ATGGTCAAGAACCAAATCCTATCAAGAGGCCACATTACTGATGATGTTCGAGAAGATTCT
GAATCTGATGATGACCACAAAGACTGA

Peptide Sequence

PEP ID

Solyc03g114600.3.1
PEP Infomation

Alternaria stem canker resistance
Sequence

MKNLDHIAASVDWEKESLPEYQDLIFLLFFALFFPVLRFILDRFVFEALAKRMIFGKKTV
VNINGREERKKINKFKESAWKFVYFLSTELLALSVTCNEPWFTDSRYFWAGPGDVVWPNL
KMKLKLKLLYMYAGGFYFYSIFATLYWETRRYDFAAQIIHHVTTVSLIVLSYVYGFARIG
SVVLALHDGSDVFMEIAKMSKYSGFDLIADIFFSLFALVFTSLRIICYPFWIIRSTCYEL
LYVLDIQKERTTGIILYFVFNALLICLLVLHLFWFKIILRMVKNQILSRGHITDDVREDS
ESDDDHKD*

Transcript Sequence

Transcript ID

Solyc03g114600.3.1
Transcript Infomation

Alternaria stem canker resistance
Sequence

AACAAAAGTTAGAAATATATTTATATAAAATCGAAACGATCAAACGTGTTAGAGAATAAT
ATGTATTATTGTGTCTTAGCTTAGAAAGAAATGTTTGACAGATGTTAAATGTTTGACTTA
ATTTTTTTTATTCAAAGCAGTCGATCCGCCAAATATGATTTTTCTACTAAAAAAAGAATT
ATTCAATCGAAACTTCCGGGACATATCTCCAAACAGAATCATGGCTTTTGCTACAAAATC
ATCACCTCGCTCTTTACAACCTAACAATTCGAAAACTTGTTCTGCAATTCATTTGAAACT
ACAACAATAGAAGAAGAAAAAAAAAGTTCAATTCAACAGATTTTTGAAAAAAAAAGTCAA
CAGATGAAAAACCTGGATCACATCGCTGCTTCGGTTGATTGGGAGAAAGAGTCTCTCCCT
GAGTACCAGGATTTGATATTTCTCTTATTTTTTGCTCTCTTCTTCCCCGTTCTTCGATTC
ATACTCGACAGATTTGTTTTCGAGGCATTGGCTAAGCGTATGATTTTTGGAAAGAAGACG
GTTGTAAATATTAACGGTCGTGAAGAGAGGAAGAAGATCAACAAATTCAAAGAGTCAGCA
TGGAAATTTGTATATTTTCTATCTACTGAGCTACTTGCACTTTCTGTGACTTGTAATGAG
CCTTGGTTCACAGATAGTCGGTATTTCTGGGCAGGACCTGGAGATGTGGTTTGGCCTAAT
TTGAAAATGAAATTAAAGCTAAAATTATTGTACATGTATGCTGGAGGATTCTACTTTTAC
TCCATATTCGCAACACTTTATTGGGAAACAAGACGCTATGATTTTGCTGCGCAGATAATT
CATCATGTAACAACAGTGTCACTCATTGTGTTGTCTTACGTATACGGGTTTGCGCGTATT
GGATCAGTGGTTCTAGCACTTCATGACGGAAGTGATGTATTCATGGAAATTGCAAAGATG
TCGAAATACAGTGGCTTTGATTTGATTGCTGATATTTTCTTCTCTCTTTTCGCGTTGGTT
TTTACATCACTTCGTATAATCTGCTATCCCTTCTGGATAATCCGAAGCACATGCTACGAA
CTTCTTTATGTATTGGATATACAGAAGGAACGGACTACTGGGATCATACTTTACTTTGTT
TTCAATGCATTGCTGATATGCTTGCTGGTTCTTCACCTCTTTTGGTTCAAAATCATACTG
CGGATGGTCAAGAACCAAATCCTATCAAGAGGCCACATTACTGATGATGTTCGAGAAGAT
TCTGAATCTGATGATGACCACAAAGACTGATCCTTCAGTAGCTAAGACCAAAAGTACAAT
TCATGGTCCAGGCTGATGTTTGAAGCATTTAAATATTTTGTATTTCTTGTAGAGGCAGCA
CTACTTGATGTCGATGAACAAATTGAACATAGGGAATTATAGTGAAAATCTTTATTCTGG
GTTCCATTCATGAGTTTTGCCTGTATGTATAAGAAAAAAGTTGCACTGTTGGAATTATGT
ATATCCTGATATGCTATTTGGATGAACTGTCAATTTAATTCGTTTAAATTTCTTCATCTC
TGAAGTCTAAACAGCTAAATTGACAGAATATTTCGCCATTGACCAACTATAAACAATAAT
TTTGAAGAAAGAACATATGATTAGCAAAGCCTCTTGCCACAAATATAACCTAAACAAGAG
CAAAATATTGCTGCTTCTCTCACATTTCAACAGGGAAAAGTCAAGAATGAATAGTAACTT
TGCAGTAAATTATGTAACAAAAGCTAAGTGATGCTATAAGATGATTCATCTGTAAACTAA
CCCCACAAATCTTGTCCTATCTTTTCAACGGGAGAATTTTGAGATCAATTTGTCAACATG
AATTATGATATCATCTATGCGAGGTCGAACTGTCCCCTGAGGCTGAAGCATCCATGTCAC
GAATTGGTGAAGGGCTTCTGGATATGGAGGTTTAGGCCCGGCTGGCCACTTTATCTGTGC
ATTTACAATAGCCAGCTGCAGACTTCCACCAGATTCCCCAAGTGCGTATTCAAAGGGAGA
TACTCCATACCTGCAATAGAGATGATATATATATTCAGTAACTTCTTATTGATATACACC
ATGAAAATCACTTCCATGGTCACGAGATATCTCCACCTTTGAAATGTCAATGGTAGGAGA
CAACTCAATTGACAAAAAAAAAAGACATGAAAAATGATGAAAATTAAACTTGGTAGAATC
AAGATAAAAAGTACTGCCTTGATTAAGTAGTCTCAGTGGAAAAAGTAGGGAGTTCTATTT
GCAGTGTAAGACCAACCACTTTTAAGTTTTACTAAACAAAACTTGTTATTCACAACCTGA
TTTTCTCATCTATTTATACTTTGGAATATCAGCTCCGAGTACTACAGCATAGTACAAGCA
CCTAAATACTAATGCTACGTACATTCACAACAGGTGCAAGAAATAGGATAGTTGAACCAA
ATCTTGATGCAACCATCAGCTGCGTATGGACAAAGGATTTTCGTTCGCTTCTACAGAGAG
CTAGCTTCAAATATTAAGAAGAAGTAAGAGTATTCTTACATTATTGCATATAATGTACAA
CCTAATGACCAGATATCAGTTCTTTCATCAATATCACATTGGCTTGGGCAATCCCATAAT
TCAGGTGCTCGGAAGGGTGCGGAAACATGCTCAGCTGCCCATTCCTGTAAAAGCAATAGC
ATAGGTGAAAACATTCAGCCCAGACATGTTCACAAGAAGGAACTTAAATGAAAATTACAG
GCATATAATTAGAGCAGAAAGTATGCATACATTTAAAAAAGTAATACAAGTACCTGCAGC
TGCAATGCCTCTTGACGAGAGCGGATTTGCTTTCTTGCAGGACGTGTACTTCCAAAGTCC
ATTAATACTGCAAGAGGTGGTTGTTCTCTTCTATGAGTTAGCAGGACATTACCAGGTTTG
ACATCATTATGTGCATAAGGAGGATCAAAGCTATGCATATGCTTGAGTCCTGCACAAAGC
TGCATAACATAGTTCCTTAAAATACATTTCTAGGCTCTAGAGATGATTATGTCCTCCCCT
TGTATTTAATCAAAAATCCAAGAAAATGTACTGTTGCAAAAATATTGGTCCTTAATTCAC
CTGACGAAATATTTGAAGAACATCTGAAGTGGAAAAGAATTCTTTCTTAGCTTTCATGCC
TGTGGCATTATCTAGTAATGTCCCATCCAAATGTACCGGAAACAACAAGTAAGCTTCATG
CTTCCAGGACTGATCTGGACCGGCCTATCCAACAGAGTAAGATATTTAGATAGAATGTAA
TGGAAATCGAAGAGAATAGGGTACAAGGAAGATGTAAATATGCAGGCATATAGTGTGCAG
TACAGCTATAATTCCATAACATCATCATAAATAGCCCTTTCATAAATGACAAATGAGAGT
TGCTCAAACTCCATGTTCAATAAGCAGAGAGTGTTGGAAGAGCAATACCTCCTCACTTCC
TGTGATTGTTTTCCATTATCCTCCACCACACTCCACCCACCCCCACCCAAAAAAAAACAC
AAAAGAAGAAGAGTTGGTTTCTCAAGAAGAGAAGTATTACAGAAAAAATCGTTTGACACT
CCACATGATCGTCCAAACTTTGGTATTTTCAGAATTCTCACATCATTTTAACTGAACAGT
GTGCAACATCTGTTAAGAAATGATTCAGATCCTCAAAGTACATCTAAGAGCTCCTGGAAC
GGTAACGGATAAGATAACCTATCATGGATGATATCGCCAGTCTCAATTTAATTTTCCACC
ACCTAATTGTGCAAAGCACTCTTGTTCACACATAACACAAAAACCTAGACATGGACATCA
CTCATCAGTGTACTACTAAAAAAAGAGATCAGACCACAGAGCTGATGGGGGTGGGGGGTC
CAAAGTGACTGCAGCAATTACCTTGACTGCAATGATAGCATGATCAAGGAGAGGAAGCAG
ATTGGGATGAGTAAATAAAGATGAAACACGGATCTCCTCTTTAACCAACGCCAACTGTTC
GCTGTTCTGAATAAGAACCTTCTTCATGGCATAAGTTCCATCATCTGCACATACATAAAG
TTTTCAATAAATCTTTTACATAATAAATGAAATGACTACAATAATTGTACACCGAAGTTC
AAAGACAACTTATTCTTTGCACCTCCCCAAAGAAAAAGATTCCAATAATCTAGAATGGGC
TAATAAACCACCAAAATCTATTTCAGTGGAAATGTCATTAGCAATGGTAGGAAAACCAAG
CGGGAAAAAAAATAAAAAAGAATTCCAAGAGCTCCTAAGTTTAGGCAAGGTCGCAT