Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g114520.3.1
CDS Infomation

Kinetochore protein (AHRD V3.3 *** D0FYH3_NICTO)
Sequence

ATGGAAGGCAGCGAGAGCGAGAAGGTGTTCGATTCATTGAACCTAAATCCCCAACTCTTC
ATCAACGAGGCCCTCAACTGTGTAGACGATTTAGTTGACGATGCTTTCGATTTCTTCCAT
CAAGAGGCAGCAAAGCTTCTGAAGACCGAGGGCACAGATCGATCCGAAGATCTGAGAAAG
GGTGTGACTAACATTAAGAACATAATCCAATTGGCTCTGGATAAGCGTTTGAGCATGTGG
GAGAAGTACTCTTTGCACCATTGTTTTACAGTTCCACAAGGGTTCTCTTTGCCCAAAGCT
GACGGACCATCCAGTGCCTCTTCACTTGATACTAATTGCATTGAGAATCCGGAAATAGAC
TCAAAGTTGAATTTCTTAAGGAAAAAACTTTCTCAGGTGGGAAAAGAGTCTGCTGAGCTT
AAAAGAGAACTACAAGCACTGGAAAGCCAGTCCATGTTAAGTGGTCGCTCTGCTGCCTCT
CTTACTGAAGCATTAGAGTTGTATCAGCAGCAGTCAGTGAATGAGAAGTTTGAAGAATTA
GTACGGACTGCATCAGATTTTCATACCAAATTAGAGACATTGACAGCCAAAATGATGGAA
GATACTGAGCACCCAAGAGCAAAGAGAAGTCGTGTTTCAAATGGTGAATTGTATAGAATG
AATAACAATAAAGGCCTCCTGAGTGTGACAATGGAGGAACTTCAAGAACTTGTGGATGAT
ATAAAGACTCTTCGCGACTAA

Peptide Sequence

PEP ID

Solyc03g114520.3.1
PEP Infomation

Kinetochore protein (AHRD V3.3 *** D0FYH3_NICTO)
Sequence

MEGSESEKVFDSLNLNPQLFINEALNCVDDLVDDAFDFFHQEAAKLLKTEGTDRSEDLRK
GVTNIKNIIQLALDKRLSMWEKYSLHHCFTVPQGFSLPKADGPSSASSLDTNCIENPEID
SKLNFLRKKLSQVGKESAELKRELQALESQSMLSGRSAASLTEALELYQQQSVNEKFEEL
VRTASDFHTKLETLTAKMMEDTEHPRAKRSRVSNGELYRMNNNKGLLSVTMEELQELVDD
IKTLRD*

Transcript Sequence

Transcript ID

Solyc03g114520.3.1
Transcript Infomation

Kinetochore protein (AHRD V3.3 *** D0FYH3_NICTO)
Sequence

TTATTGCCCTATTTGGGATTATAATTATTGAATGGAGAAAAGAAAATGCCCAATCTCACC
TGGCGGGAAACTGAAGAGGGGAATTGCAAAAGAACAAAAAGGCCTTGAAATCAGAAATTT
GAAATTGCAGAAGCACCAAACCCTTGAGGAAATTGAAATTGGGAAGCTTGGTAATGGAAG
GCAGCGAGAGCGAGAAGGTGTTCGATTCATTGAACCTAAATCCCCAACTCTTCATCAACG
AGGCCCTCAACTGTGTAGACGATTTAGTTGACGATGCTTTCGATTTCTTCCATCAAGAGG
CAGCAAAGCTTCTGAAGACCGAGGGCACAGATCGATCCGAAGATCTGAGAAAGGGTGTGA
CTAACATTAAGAACATAATCCAATTGGCTCTGGATAAGCGTTTGAGCATGTGGGAGAAGT
ACTCTTTGCACCATTGTTTTACAGTTCCACAAGGGTTCTCTTTGCCCAAAGCTGACGGAC
CATCCAGTGCCTCTTCACTTGATACTAATTGCATTGAGAATCCGGAAATAGACTCAAAGT
TGAATTTCTTAAGGAAAAAACTTTCTCAGGTGGGAAAAGAGTCTGCTGAGCTTAAAAGAG
AACTACAAGCACTGGAAAGCCAGTCCATGTTAAGTGGTCGCTCTGCTGCCTCTCTTACTG
AAGCATTAGAGTTGTATCAGCAGCAGTCAGTGAATGAGAAGTTTGAAGAATTAGTACGGA
CTGCATCAGATTTTCATACCAAATTAGAGACATTGACAGCCAAAATGATGGAAGATACTG
AGCACCCAAGAGCAAAGAGAAGTCGTGTTTCAAATGGTGAATTGTATAGAATGAATAACA
ATAAAGGCCTCCTGAGTGTGACAATGGAGGAACTTCAAGAACTTGTGGATGATATAAAGA
CTCTTCGCGACTAATCAGTGGCTTAATTCTCTAGTGCTGTAAAGAAGTGCTCGTTTAGAT
TCCTAGTTATGTAAGAAGTTTTTGATGTGATATATTTCTTCGTTTTGAAATGCCTAAAAT
GTGAGAGATAACAGTAAGCAGTTTACTATGACATGATTAATGACAAGTATGGAAAAACAA
ATAGCTAAAACCTCTTGATATTCTGAGTGTCTGAACAGATGCAAATATTCCATATGTTTT
CATAGATTATTAACCACCAAGATCATATGAACAACTACAATGAGGTAGCCGACATTGCTT
GTTCATGCGCATTTAATCTTCTGCAGTATT