Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g114370.3.1
CDS Infomation

RNA helicase DEAD13
Sequence

ATGAGTTCAGAGTTGTTTTCTTCTGTTCAAATTTCTGAGCTCACCAGGAAAGCTATTGAG
GATATGGGATTTGAGTACATGACTCAGATCCAAGCTAGGGCAATTCCTCCTCTTGTGGAA
GGCAAGGATGTCCTCGGAGCTGCAAGAACTGGTTCTGGTAAAACTCTAGCATTTTTGGTT
CCAGCTGTGGAGTTATTATTTAATGTCCACTTTACACCACGTAATGGAACTGGGGTGGTT
GTTATTTGCCCAACAAGAGAACTGGCTATACAGACACATGCTGTGGCAAAGGACCTTCTC
AAGTATCACTCGCAGACTCTTGGGTTGGTTATCGGTGGTTCAGCAAGAAGAGCAGAGGCA
GAGCGTATTGCTAAAGGGGCTAATCTCTTAGTAGGCACCCCTGGTCGACTACTTGATCAT
CTTAGAAATACCAAGGGTTTCAATTATAAGAACCTTCAGTGTCTCGTGATTGATGAAGCT
GATAGGATTTTGGAAGCAAACTTTGAGGAAGATATGCAACAAATACTTAAACTTCTACCA
AAGGAGGGGAGGCAGACTGCTCTCTTTTCGGCCACACAGACAAAAAAGGTTGAGGACCTT
GCACGCTTATCTTTGACAGCTCCTATCTATATTGATGTGGACGATGGGAGAAGGAGGGTC
ACAAATGAAGGGCTACAACAAGGATACTGTGTTGTCCCAAGTGCCAGGAGATTTATTCTC
CTTTATTCATTCTTGAAGAGGAACCTGTCAAAGAAAATAATGGTTTTCTTCTCATCTTGC
AACTCTGTCAAGTTCCATTCCGAACTTCTTCGCTATATCAAGATTGAGTGCCACGATATT
CATGGGAAGCAAAAGCAGCAAAAACGAACGTCTACCTTTTTTGATTTCTGCGAAGCAAAG
AAGGGCATCCTGTTATGCACAGATGTCGCTGCACGTGGTCTGGATATTCCTGCTGTGGAC
TGGATTGTGCAGTTTGACCCCCCCGATGAACCCAAGGAATACATACACAGAGTTGGTCGA
ACAGCACGTGGTGAAGGTGCTAAAGGAAACGCTTTGCTATTCTTGATTCCAGAGGAGTTG
CAGTTTCTCAAGTACCTGAAGGCGGCAAAAGTACCTGTAAAAGAATACGAATTTGATCAT
AAGAAGCTGGCCAATGTGCAGTCACTCCTGGAAAAATTGGTTGCAAACAACTATTACTTG
AACCAGTCGGCTAAAGAGGCATATAGGTCTTATTTACTATCATATAATTCTCATTCCATG
AAGGAAATATTCAATGTTCACAGACTTGATCTGCAGGCTGTAGCTTCTTCGTTCTGTTTT
TCTAATCCTCCAAAAGTACACCTCAACATAGATAGCAACGCTTCCAAGTTCAGGCAGAAA
AAGCGTAAAGTTGAAGGAAGCCGAAATGGGTTCAGCGAAGGCAATCCTTATGGGAAGAAA
AGAGCTGACGATACGAGGCAGTTTGTAAGATATTAG

Peptide Sequence

PEP ID

Solyc03g114370.3.1
PEP Infomation

RNA helicase DEAD13
Sequence

MSSELFSSVQISELTRKAIEDMGFEYMTQIQARAIPPLVEGKDVLGAARTGSGKTLAFLV
PAVELLFNVHFTPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARRAEA
ERIAKGANLLVGTPGRLLDHLRNTKGFNYKNLQCLVIDEADRILEANFEEDMQQILKLLP
KEGRQTALFSATQTKKVEDLARLSLTAPIYIDVDDGRRRVTNEGLQQGYCVVPSARRFIL
LYSFLKRNLSKKIMVFFSSCNSVKFHSELLRYIKIECHDIHGKQKQQKRTSTFFDFCEAK
KGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGAKGNALLFLIPEEL
QFLKYLKAAKVPVKEYEFDHKKLANVQSLLEKLVANNYYLNQSAKEAYRSYLLSYNSHSM
KEIFNVHRLDLQAVASSFCFSNPPKVHLNIDSNASKFRQKKRKVEGSRNGFSEGNPYGKK
RADDTRQFVRY*

Transcript Sequence

Transcript ID

Solyc03g114370.3.1
Transcript Infomation

RNA helicase DEAD13
Sequence

GAAGGAGGAGATTAAGAAAGAGATGAAGAGTGGGTCAGGTATTATGAGTTCAGAGTTGTT
TTCTTCTGTTCAAATTTCTGAGCTCACCAGGAAAGCTATTGAGGATATGGGATTTGAGTA
CATGACTCAGATCCAAGCTAGGGCAATTCCTCCTCTTGTGGAAGGCAAGGATGTCCTCGG
AGCTGCAAGAACTGGTTCTGGTAAAACTCTAGCATTTTTGGTTCCAGCTGTGGAGTTATT
ATTTAATGTCCACTTTACACCACGTAATGGAACTGGGGTGGTTGTTATTTGCCCAACAAG
AGAACTGGCTATACAGACACATGCTGTGGCAAAGGACCTTCTCAAGTATCACTCGCAGAC
TCTTGGGTTGGTTATCGGTGGTTCAGCAAGAAGAGCAGAGGCAGAGCGTATTGCTAAAGG
GGCTAATCTCTTAGTAGGCACCCCTGGTCGACTACTTGATCATCTTAGAAATACCAAGGG
TTTCAATTATAAGAACCTTCAGTGTCTCGTGATTGATGAAGCTGATAGGATTTTGGAAGC
AAACTTTGAGGAAGATATGCAACAAATACTTAAACTTCTACCAAAGGAGGGGAGGCAGAC
TGCTCTCTTTTCGGCCACACAGACAAAAAAGGTTGAGGACCTTGCACGCTTATCTTTGAC
AGCTCCTATCTATATTGATGTGGACGATGGGAGAAGGAGGGTCACAAATGAAGGGCTACA
ACAAGGATACTGTGTTGTCCCAAGTGCCAGGAGATTTATTCTCCTTTATTCATTCTTGAA
GAGGAACCTGTCAAAGAAAATAATGGTTTTCTTCTCATCTTGCAACTCTGTCAAGTTCCA
TTCCGAACTTCTTCGCTATATCAAGATTGAGTGCCACGATATTCATGGGAAGCAAAAGCA
GCAAAAACGAACGTCTACCTTTTTTGATTTCTGCGAAGCAAAGAAGGGCATCCTGTTATG
CACAGATGTCGCTGCACGTGGTCTGGATATTCCTGCTGTGGACTGGATTGTGCAGTTTGA
CCCCCCCGATGAACCCAAGGAATACATACACAGAGTTGGTCGAACAGCACGTGGTGAAGG
TGCTAAAGGAAACGCTTTGCTATTCTTGATTCCAGAGGAGTTGCAGTTTCTCAAGTACCT
GAAGGCGGCAAAAGTACCTGTAAAAGAATACGAATTTGATCATAAGAAGCTGGCCAATGT
GCAGTCACTCCTGGAAAAATTGGTTGCAAACAACTATTACTTGAACCAGTCGGCTAAAGA
GGCATATAGGTCTTATTTACTATCATATAATTCTCATTCCATGAAGGAAATATTCAATGT
TCACAGACTTGATCTGCAGGCTGTAGCTTCTTCGTTCTGTTTTTCTAATCCTCCAAAAGT
ACACCTCAACATAGATAGCAACGCTTCCAAGTTCAGGCAGAAAAAGCGTAAAGTTGAAGG
AAGCCGAAATGGGTTCAGCGAAGGCAATCCTTATGGGAAGAAAAGAGCTGACGATACGAG
GCAGTTTGTAAGATATTAG