Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g114160.1.1
CDS Infomation

U-box domain-containing protein 19, putative (AHRD V3.3 *** A0A061G0Z4_THECC)
Sequence

ATGATTCAAAGATTTGATCGGAATGATCGCCGGATTTTGACATTCCCGGCGGTACATCCA
TGTGAGGGGATATCTCCGGCTACCCTTTTGAATTCTTTGATTATTCTATCTAGAGACATA
TGCAATTTCAAATCGAATTTTTTTGCGACTCAACGGAGGAATGTTCGGGAAATGATTAGG
CAAGTGGGGATCCTCTTGATTTTTTTCGAGGAAATCCTGGATCATCTACCTAGTGATAGA
GATTCCATTGTTCTTTGTTTTGCAGAACTACACACAACGTTTCAAAAGATTAACTTTTTA
TTAGATGATTGTACGCGTGAGGGGGCGAAAACATGGATGCTTATGAAATCCCACTCTGTA
GCAAGTCAATTTCAAGTTTTGGTTAGAACTGTGGCTACTGCACTTGATGTTCTTCCTTTG
AATTCTCTTAATGTTTCCAGAGAAATCAAGGAGTTGGTTGTAATGGTGGCTAATCAAGCA
CAGAGGGCGAAAATGGAGCTTGACCCGGAAGACGAAGAAGCTGTGAAGAGAGTAATTTTG
CTTTTGAACCAATTTGAGAATAAATTTCAACCTGACCCCTGTGTAATCAAGAAATTTCTT
GATTATCTTGATATCACAACCTGGGCAGAGTGTCACAAGGAGATTAAATTCTTGGAGGAT
GCGATTAATATCGAATGCTCGGAGAATTACGAAAGAGAAGTACCTATGTTAAGCAGTTTA
GTTGGATTCTTGAGCTATTGCAGAGGAATTGTGTTTGAGGACTCTGTTTATGGGAACACT
GATCAATCAGATGGATCATCCAATCTTGAAACTCTTAGTTGCTTGGATCCTGAGGATTTC
AGGTGTCCCATTTCTCTGGAACTCATGACGGATCCAGTGACAGTGTCCACAGGGCAGACG
TATGATCGCGCTTCGATTCAAAAATGGCTCAAGTCAGGGAACCTCCTCTGTCCCAAAACA
GGGGAGACATTACAGAGCACAGAATTAGTACCTAATTCCTCTCTGCGGAACCTCATCCAA
CAATTCTGTGCTGATAATGGAATATCTATAGCTAAATCAAGGAAGAAGAATCATGATATA
TCACGGACTATTTTGCCAGGAAATCCAGCAGCTGCGGAAGCAATCAAATTCCTCTCCGAA
TTTCTGGCTTGCAGGCTGTATTTTGGTTCTGATCAGCAGAAAACCAAGGCTGCTTATGAA
ATTCGCTTGCTTGCAAAATCAAATATATTCAACCGGTCCGTGTTGATCGAAGCTGCAACA
ATCCCAGCACTCTTACAAATGCTTTGCACAAATGATACATCTATGCAAGAGCATTCAATT
TCCGCCTTGCTCAAACTATCAAAACATTCCAACGGAAAGAAAGTGATCATGGAAAACAGG
GGCCTGAATTCGATTCTTGGAGTTCTCAAGAATGGCCTAAAGCTAGAATCGAAGCAAATT
GCAGCTGCGGTGATCTTCTACATCTCTTCACCTCGTGAATACCGCAAGCTAATAAGCGAA
AATCCAGAAGTATTTCCAGCTTTAGTGGACTTAATCAACTACGGAACAAGCTGTGGGAAA
AAGAATGCGATAGTTGCAATGTTCGGTCTATTATTGAGTTACAGGAACCACGAGAGAGCA
CTTGGTGCAGGAACAGTTCCAGCACTAGTCAATCTTCTAACTTCTTCAGATAAAGTTGAA
CTAAACACAGACGCACTCGCGGTTCTAGCTACATTAGCCGAAAGAACAGAAGGGTCTTTC
GCGATTTTAGAAGCTTCAGCATTACGAGTAATCTTGGATCAATTACAGAACACAACATCT
CGAGCAGGAAGAGAGTATTGTGTTTCCATTTTGTTGTCATTATGTGTCAATAGTGGCGCG
GAGGTAATAGCCTCTCTGGTAAGAGAAAAGGCGCTTATGCCGCTTCTTTATTCACTTTTA
ACAGAAGGAACCAGCCAAGCAAAGAAGAGGACTAGGTCTCTTATCAAAACTCTGCAGAGA
TATTGTGAAACAAGCACTTCTAGGTTAGTGAGTGAAGTTCCACAAGAACAATTTATTGAT
GTAAGGTGA

Peptide Sequence

PEP ID

Solyc03g114160.1.1
PEP Infomation

U-box domain-containing protein 19, putative (AHRD V3.3 *** A0A061G0Z4_THECC)
Sequence

MIQRFDRNDRRILTFPAVHPCEGISPATLLNSLIILSRDICNFKSNFFATQRRNVREMIR
QVGILLIFFEEILDHLPSDRDSIVLCFAELHTTFQKINFLLDDCTREGAKTWMLMKSHSV
ASQFQVLVRTVATALDVLPLNSLNVSREIKELVVMVANQAQRAKMELDPEDEEAVKRVIL
LLNQFENKFQPDPCVIKKFLDYLDITTWAECHKEIKFLEDAINIECSENYEREVPMLSSL
VGFLSYCRGIVFEDSVYGNTDQSDGSSNLETLSCLDPEDFRCPISLELMTDPVTVSTGQT
YDRASIQKWLKSGNLLCPKTGETLQSTELVPNSSLRNLIQQFCADNGISIAKSRKKNHDI
SRTILPGNPAAAEAIKFLSEFLACRLYFGSDQQKTKAAYEIRLLAKSNIFNRSVLIEAAT
IPALLQMLCTNDTSMQEHSISALLKLSKHSNGKKVIMENRGLNSILGVLKNGLKLESKQI
AAAVIFYISSPREYRKLISENPEVFPALVDLINYGTSCGKKNAIVAMFGLLLSYRNHERA
LGAGTVPALVNLLTSSDKVELNTDALAVLATLAERTEGSFAILEASALRVILDQLQNTTS
RAGREYCVSILLSLCVNSGAEVIASLVREKALMPLLYSLLTEGTSQAKKRTRSLIKTLQR
YCETSTSRLVSEVPQEQFIDVR*

Transcript Sequence

Transcript ID

Solyc03g114160.1.1
Transcript Infomation

U-box domain-containing protein 19, putative (AHRD V3.3 *** A0A061G0Z4_THECC)
Sequence

ATGATTCAAAGATTTGATCGGAATGATCGCCGGATTTTGACATTCCCGGCGGTACATCCA
TGTGAGGGGATATCTCCGGCTACCCTTTTGAATTCTTTGATTATTCTATCTAGAGACATA
TGCAATTTCAAATCGAATTTTTTTGCGACTCAACGGAGGAATGTTCGGGAAATGATTAGG
CAAGTGGGGATCCTCTTGATTTTTTTCGAGGAAATCCTGGATCATCTACCTAGTGATAGA
GATTCCATTGTTCTTTGTTTTGCAGAACTACACACAACGTTTCAAAAGATTAACTTTTTA
TTAGATGATTGTACGCGTGAGGGGGCGAAAACATGGATGCTTATGAAATCCCACTCTGTA
GCAAGTCAATTTCAAGTTTTGGTTAGAACTGTGGCTACTGCACTTGATGTTCTTCCTTTG
AATTCTCTTAATGTTTCCAGAGAAATCAAGGAGTTGGTTGTAATGGTGGCTAATCAAGCA
CAGAGGGCGAAAATGGAGCTTGACCCGGAAGACGAAGAAGCTGTGAAGAGAGTAATTTTG
CTTTTGAACCAATTTGAGAATAAATTTCAACCTGACCCCTGTGTAATCAAGAAATTTCTT
GATTATCTTGATATCACAACCTGGGCAGAGTGTCACAAGGAGATTAAATTCTTGGAGGAT
GCGATTAATATCGAATGCTCGGAGAATTACGAAAGAGAAGTACCTATGTTAAGCAGTTTA
GTTGGATTCTTGAGCTATTGCAGAGGAATTGTGTTTGAGGACTCTGTTTATGGGAACACT
GATCAATCAGATGGATCATCCAATCTTGAAACTCTTAGTTGCTTGGATCCTGAGGATTTC
AGGTGTCCCATTTCTCTGGAACTCATGACGGATCCAGTGACAGTGTCCACAGGGCAGACG
TATGATCGCGCTTCGATTCAAAAATGGCTCAAGTCAGGGAACCTCCTCTGTCCCAAAACA
GGGGAGACATTACAGAGCACAGAATTAGTACCTAATTCCTCTCTGCGGAACCTCATCCAA
CAATTCTGTGCTGATAATGGAATATCTATAGCTAAATCAAGGAAGAAGAATCATGATATA
TCACGGACTATTTTGCCAGGAAATCCAGCAGCTGCGGAAGCAATCAAATTCCTCTCCGAA
TTTCTGGCTTGCAGGCTGTATTTTGGTTCTGATCAGCAGAAAACCAAGGCTGCTTATGAA
ATTCGCTTGCTTGCAAAATCAAATATATTCAACCGGTCCGTGTTGATCGAAGCTGCAACA
ATCCCAGCACTCTTACAAATGCTTTGCACAAATGATACATCTATGCAAGAGCATTCAATT
TCCGCCTTGCTCAAACTATCAAAACATTCCAACGGAAAGAAAGTGATCATGGAAAACAGG
GGCCTGAATTCGATTCTTGGAGTTCTCAAGAATGGCCTAAAGCTAGAATCGAAGCAAATT
GCAGCTGCGGTGATCTTCTACATCTCTTCACCTCGTGAATACCGCAAGCTAATAAGCGAA
AATCCAGAAGTATTTCCAGCTTTAGTGGACTTAATCAACTACGGAACAAGCTGTGGGAAA
AAGAATGCGATAGTTGCAATGTTCGGTCTATTATTGAGTTACAGGAACCACGAGAGAGCA
CTTGGTGCAGGAACAGTTCCAGCACTAGTCAATCTTCTAACTTCTTCAGATAAAGTTGAA
CTAAACACAGACGCACTCGCGGTTCTAGCTACATTAGCCGAAAGAACAGAAGGGTCTTTC
GCGATTTTAGAAGCTTCAGCATTACGAGTAATCTTGGATCAATTACAGAACACAACATCT
CGAGCAGGAAGAGAGTATTGTGTTTCCATTTTGTTGTCATTATGTGTCAATAGTGGCGCG
GAGGTAATAGCCTCTCTGGTAAGAGAAAAGGCGCTTATGCCGCTTCTTTATTCACTTTTA
ACAGAAGGAACCAGCCAAGCAAAGAAGAGGACTAGGTCTCTTATCAAAACTCTGCAGAGA
TATTGTGAAACAAGCACTTCTAGGTTAGTGAGTGAAGTTCCACAAGAACAATTTATTGAT
GTAAGGTGA