Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g113850.1.1
CDS Infomation

LOW QUALITY:Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence

ATGATGCCTTTTTACCAAACATCATGTTCAAGAAATAGCTCAAAAGCAGAACAAGAAAAG
CCAACTTCTTTAGATTCACAGCCAAGTTTTCGTTCAGTTCCTTCAATCAAGTCACTATGT
CATGATCAGAGTTTTTCGCGTAATCTTGAAACTCAACATCAATGCATAGCTAATCTTAAG
GGACAGAATTCCTATACATCTTCCCTTGTACTTGGTGGGAAATTCCTTTTTACTGGCTCT
TCTGATAAAGAAATTTGTATGTGGGAGCAAAAAGCTTTAACTTCCACAATAGATGCTAGT
ATAATCGACACGGTTATAGCAGGGGAAGGTGCAGTGAAGTCTCTAGTAATTTTGGCTGAT
AAGGTCTTTAGTGCTCATCAAGATCACAAAATCAGAGTGTGGAGAATCGAAAACCATGAT
ACGGATACTCCTAAAATAGTTCATTTGGCCACTCTACCAATACTTAGTGACAGAGCCTTT
AAGTTTATGTTACCAAAAAACCATGTTCAGATCAGGCGCCACAAGAAGTCTACATGGGTG
CACCATGTTGACACAGTGTCAGCACTAGCCCTTTCGAACAACAAGTCATTCCTCTACTCT
GTTTCGTGGGATCGAACACTTAAAATCTGGCGAACCAGTGATTTTAAGTGCCTGGAATCA
ATAGCAAATGCACATGATGACGCGATCAATGCACTAGAAATATCACAAGATGGGGATGTT
TTCACCGGATCAGCTGACAAGAGAATCAAGATGTGGAGAAAGGAAGAGAAAAAACATTTA
CTAGTTTGTACACTGGAGAAACACAGATCAGGTGTAAATGCACTAGCAGTGGGGAGAAGT
AGTACTAGTACTCATTCTGTTTTATATTCGGGTGCTTGTGATAGGTCGATATTAGTATGG
GAGAAGGACGAAAATGGTGAAATGGTGCTGGTGGGTGCACTCAGGGGTCATAAGAAGTCC
ATACTATGTCTGGCTGTCGTCGCGGATTTGGTGTGCAGTGGTTCAGAAGATAAAACAGTA
AGAGTATGGAGAGGGGTTGAGAGATGCTACTCTTGTCTTAGTGTTATTTCAGGGCACAGT
GGACCAGTGAAATGCCTAACTGTGACTAGTGATCAACAAATTCCATCAGATACAAATTCT
TCATATGTCCTATACACTGCTAGTTTAGATGGTGAAACTAAGGTTGGAAGATTTTTGTTC
CTTTTCTCTAAAGCTATTTGCATGATGAACATGGTCAAGATTTGCCAGTTAACATATCTG
TATACTATATTTTGCATTATAGATTGTTGGGCAAGTGACCTAGAGAAGAAAATATCTGCA
AAATTTCAACTTTTTTTCTTATTTAGTTGGATTGTTTATTCTATTGAAAAAGGCTACCAT
TATGAAATGATTATGCTTCTTAAACTTGGAAACCACTTTGATTGA

Peptide Sequence

PEP ID

Solyc03g113850.1.1
PEP Infomation

LOW QUALITY:Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence

MMPFYQTSCSRNSSKAEQEKPTSLDSQPSFRSVPSIKSLCHDQSFSRNLETQHQCIANLK
GQNSYTSSLVLGGKFLFTGSSDKEICMWEQKALTSTIDASIIDTVIAGEGAVKSLVILAD
KVFSAHQDHKIRVWRIENHDTDTPKIVHLATLPILSDRAFKFMLPKNHVQIRRHKKSTWV
HHVDTVSALALSNNKSFLYSVSWDRTLKIWRTSDFKCLESIANAHDDAINALEISQDGDV
FTGSADKRIKMWRKEEKKHLLVCTLEKHRSGVNALAVGRSSTSTHSVLYSGACDRSILVW
EKDENGEMVLVGALRGHKKSILCLAVVADLVCSGSEDKTVRVWRGVERCYSCLSVISGHS
GPVKCLTVTSDQQIPSDTNSSYVLYTASLDGETKVGRFLFLFSKAICMMNMVKICQLTYL
YTIFCIIDCWASDLEKKISAKFQLFFLFSWIVYSIEKGYHYEMIMLLKLGNHFD*

Transcript Sequence

Transcript ID

Solyc03g113850.1.1
Transcript Infomation

LOW QUALITY:Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence

ATGATGCCTTTTTACCAAACATCATGTTCAAGAAATAGCTCAAAAGCAGAACAAGAAAAG
CCAACTTCTTTAGATTCACAGCCAAGTTTTCGTTCAGTTCCTTCAATCAAGTCACTATGT
CATGATCAGAGTTTTTCGCGTAATCTTGAAACTCAACATCAATGCATAGCTAATCTTAAG
GGACAGAATTCCTATACATCTTCCCTTGTACTTGGTGGGAAATTCCTTTTTACTGGCTCT
TCTGATAAAGAAATTTGTATGTGGGAGCAAAAAGCTTTAACTTCCACAATAGATGCTAGT
ATAATCGACACGGTTATAGCAGGGGAAGGTGCAGTGAAGTCTCTAGTAATTTTGGCTGAT
AAGGTCTTTAGTGCTCATCAAGATCACAAAATCAGAGTGTGGAGAATCGAAAACCATGAT
ACGGATACTCCTAAAATAGTTCATTTGGCCACTCTACCAATACTTAGTGACAGAGCCTTT
AAGTTTATGTTACCAAAAAACCATGTTCAGATCAGGCGCCACAAGAAGTCTACATGGGTG
CACCATGTTGACACAGTGTCAGCACTAGCCCTTTCGAACAACAAGTCATTCCTCTACTCT
GTTTCGTGGGATCGAACACTTAAAATCTGGCGAACCAGTGATTTTAAGTGCCTGGAATCA
ATAGCAAATGCACATGATGACGCGATCAATGCACTAGAAATATCACAAGATGGGGATGTT
TTCACCGGATCAGCTGACAAGAGAATCAAGATGTGGAGAAAGGAAGAGAAAAAACATTTA
CTAGTTTGTACACTGGAGAAACACAGATCAGGTGTAAATGCACTAGCAGTGGGGAGAAGT
AGTACTAGTACTCATTCTGTTTTATATTCGGGTGCTTGTGATAGGTCGATATTAGTATGG
GAGAAGGACGAAAATGGTGAAATGGTGCTGGTGGGTGCACTCAGGGGTCATAAGAAGTCC
ATACTATGTCTGGCTGTCGTCGCGGATTTGGTGTGCAGTGGTTCAGAAGATAAAACAGTA
AGAGTATGGAGAGGGGTTGAGAGATGCTACTCTTGTCTTAGTGTTATTTCAGGGCACAGT
GGACCAGTGAAATGCCTAACTGTGACTAGTGATCAACAAATTCCATCAGATACAAATTCT
TCATATGTCCTATACACTGCTAGTTTAGATGGTGAAACTAAGGTTGGAAGATTTTTGTTC
CTTTTCTCTAAAGCTATTTGCATGATGAACATGGTCAAGATTTGCCAGTTAACATATCTG
TATACTATATTTTGCATTATAGATTGTTGGGCAAGTGACCTAGAGAAGAAAATATCTGCA
AAATTTCAACTTTTTTTCTTATTTAGTTGGATTGTTTATTCTATTGAAAAAGGCTACCAT
TATGAAATGATTATGCTTCTTAAACTTGGAAACCACTTTGATTGA