Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g113780.3.1
CDS Infomation

Pyridoxamine 5-phosphate oxidase, putative (AHRD V3.3 *** B9RJT5_RICCO)
Sequence

ATGCTTCGCAAAGCCAAAAGAATGTCATGTCTTCTCTCCCAAACATTACTTCCTTCTTCA
GCTGCTAATTCCGTCTGTAATTTCAAGCCTACTATCGCTCCACATCATCTTCTTCTTCCG
AGGTTGTTGGGTTTAAGACCCAAGATTGGATTTTTGGGTTCATTGAGAGGAATGGCAACG
AAAATGGATATCATTCAGCAAAACCCTGAGGCCATTTCGTATCTAAACCAGAAAGAAGCT
GCTCAAATTGATGAGATACTTATGGGTCCTCTTGGTTTCAGTGTTGATCAACTTATGGAA
CTGGCTGGCTTGAGTGTTGCTGCTGCAATTGCTGAGGTCTACAGACCAAGTGAGTACAGT
CGTGTTCTTACTATTTGCGGTCCTGGTAATAATGGCGGTGATGGTCTTGTAGCTGCTCGT
CATCTATATCACTTTGGCTATAAACCATTCATATGTTACCCTAAGCGTACTGCTAAGCCT
CTTTATGATGGCTTGGTAACTCAGCTTGAGTCGCTGTCAGTTCCTTTCTTGTCATTGGAA
GATTTGCCAAAGGACTTGTCTGACAGCTTTGACATTCTAGTGGATGCAATGTTCGGATTC
TCGTTCCATGGTAGCCCAAGGCCACCTTTTGATGACTTAATCCAGAGACTGGTGGCACTA
AAGCTTAATGGCGATACACATCAGAAATCACCTGCCATCATCTCTATAGATATTCCATCT
GGATGGCATGTGGAAGAGGGGGATTTAAGTGGTGAAGGTATTCAACCTGACATGCTGGTT
TCTCTAACTGCCCCAAAATTGTGTGCCAAAAGGTTTTCTGGCTCGCACCACTTTTTAGGT
GGCAGATTTGTTCCACCATCCATCAGAAACAAATTTAATCTTCAATTACCAGCATATCCT
GGCACTTCCATGTGTGTCCGTATTGGCAAGCCCCCAAAAATTGACATATCATCTCTGAGG
GAGAACTATATTTCTCCTGCGTTGCTTGAGGAAGAGGTCGTCGCTGACCCCTTTGATCAG
TTCCAAAAGTGGTTTGATGATGCAATGGTCGCAGGCTTGAAGGAACCAAATGCCATGGCC
TTGTCAACTACTGGCAAAGATGGCAAGCCTTCATCAAGGATCGTATTGCTGAAAGGGTTT
GACAAGGATGGTTTTGTCTGGTACACCAATTATGAAGGCAGAAAAGGTCAACAAATAGCT
GAAAATCCTCATGCCGCACTCCTCTTTTATTGGGATGATTTGAACCGCCAGGTAAGAATC
GAAGGGCCGGTGCAAAAAGTTTCTGATGAGGAATCTGAGCAATATTTCCACAGTCGTCCT
CGGGGAAGTCAGATTGGTGCCATAGTTAGCCAGCAGAGCACAGTTATTCCAGGAAGGCAT
GTCCTCCTTGATGAATACAAACAGTTGGAGGCAAAATACTCTGATGGATTCGTGATTCCC
AAACCAAAACACTGGGGAGGGTACCGGCTTAAACCTGAAATGTTTGAATTTTGGCAGGGA
CAGAAATCTCGCTTGCATGACAGGTTGCGTTACATCCCGGAAACAGCTGATGGAAAAACA
GTGTGGAGGATTGAGCGATTGGCTCCATGA

Peptide Sequence

PEP ID

Solyc03g113780.3.1
PEP Infomation

Pyridoxamine 5-phosphate oxidase, putative (AHRD V3.3 *** B9RJT5_RICCO)
Sequence

MLRKAKRMSCLLSQTLLPSSAANSVCNFKPTIAPHHLLLPRLLGLRPKIGFLGSLRGMAT
KMDIIQQNPEAISYLNQKEAAQIDEILMGPLGFSVDQLMELAGLSVAAAIAEVYRPSEYS
RVLTICGPGNNGGDGLVAARHLYHFGYKPFICYPKRTAKPLYDGLVTQLESLSVPFLSLE
DLPKDLSDSFDILVDAMFGFSFHGSPRPPFDDLIQRLVALKLNGDTHQKSPAIISIDIPS
GWHVEEGDLSGEGIQPDMLVSLTAPKLCAKRFSGSHHFLGGRFVPPSIRNKFNLQLPAYP
GTSMCVRIGKPPKIDISSLRENYISPALLEEEVVADPFDQFQKWFDDAMVAGLKEPNAMA
LSTTGKDGKPSSRIVLLKGFDKDGFVWYTNYEGRKGQQIAENPHAALLFYWDDLNRQVRI
EGPVQKVSDEESEQYFHSRPRGSQIGAIVSQQSTVIPGRHVLLDEYKQLEAKYSDGFVIP
KPKHWGGYRLKPEMFEFWQGQKSRLHDRLRYIPETADGKTVWRIERLAP*

Transcript Sequence

Transcript ID

Solyc03g113780.3.1
Transcript Infomation

Pyridoxamine 5-phosphate oxidase, putative (AHRD V3.3 *** B9RJT5_RICCO)
Sequence

TATATCCTTTAATTCCTCCTATTCAATAAAGGTTATCTTGAGGTTTCATGTGTATTAGAT
CAGGGGAAAAAAAGTGGCTAATCGAAGAGGTGACAATGCCAGAATACTCTATTGTTAATT
GTGTATAAAATGCTTCGCAAAGCCAAAAGAATGTCATGTCTTCTCTCCCAAACATTACTT
CCTTCTTCAGCTGCTAATTCCGTCTGTAATTTCAAGCCTACTATCGCTCCACATCATCTT
CTTCTTCCGAGGTTGTTGGGTTTAAGACCCAAGATTGGATTTTTGGGTTCATTGAGAGGA
ATGGCAACGAAAATGGATATCATTCAGCAAAACCCTGAGGCCATTTCGTATCTAAACCAG
AAAGAAGCTGCTCAAATTGATGAGATACTTATGGGTCCTCTTGGTTTCAGTGTTGATCAA
CTTATGGAACTGGCTGGCTTGAGTGTTGCTGCTGCAATTGCTGAGGTCTACAGACCAAGT
GAGTACAGTCGTGTTCTTACTATTTGCGGTCCTGGTAATAATGGCGGTGATGGTCTTGTA
GCTGCTCGTCATCTATATCACTTTGGCTATAAACCATTCATATGTTACCCTAAGCGTACT
GCTAAGCCTCTTTATGATGGCTTGGTAACTCAGCTTGAGTCGCTGTCAGTTCCTTTCTTG
TCATTGGAAGATTTGCCAAAGGACTTGTCTGACAGCTTTGACATTCTAGTGGATGCAATG
TTCGGATTCTCGTTCCATGGTAGCCCAAGGCCACCTTTTGATGACTTAATCCAGAGACTG
GTGGCACTAAAGCTTAATGGCGATACACATCAGAAATCACCTGCCATCATCTCTATAGAT
ATTCCATCTGGATGGCATGTGGAAGAGGGGGATTTAAGTGGTGAAGGTATTCAACCTGAC
ATGCTGGTTTCTCTAACTGCCCCAAAATTGTGTGCCAAAAGGTTTTCTGGCTCGCACCAC
TTTTTAGGTGGCAGATTTGTTCCACCATCCATCAGAAACAAATTTAATCTTCAATTACCA
GCATATCCTGGCACTTCCATGTGTGTCCGTATTGGCAAGCCCCCAAAAATTGACATATCA
TCTCTGAGGGAGAACTATATTTCTCCTGCGTTGCTTGAGGAAGAGGTCGTCGCTGACCCC
TTTGATCAGTTCCAAAAGTGGTTTGATGATGCAATGGTCGCAGGCTTGAAGGAACCAAAT
GCCATGGCCTTGTCAACTACTGGCAAAGATGGCAAGCCTTCATCAAGGATCGTATTGCTG
AAAGGGTTTGACAAGGATGGTTTTGTCTGGTACACCAATTATGAAGGCAGAAAAGGTCAA
CAAATAGCTGAAAATCCTCATGCCGCACTCCTCTTTTATTGGGATGATTTGAACCGCCAG
GTAAGAATCGAAGGGCCGGTGCAAAAAGTTTCTGATGAGGAATCTGAGCAATATTTCCAC
AGTCGTCCTCGGGGAAGTCAGATTGGTGCCATAGTTAGCCAGCAGAGCACAGTTATTCCA
GGAAGGCATGTCCTCCTTGATGAATACAAACAGTTGGAGGCAAAATACTCTGATGGATTC
GTGATTCCCAAACCAAAACACTGGGGAGGGTACCGGCTTAAACCTGAAATGTTTGAATTT
TGGCAGGGACAGAAATCTCGCTTGCATGACAGGTTGCGTTACATCCCGGAAACAGCTGAT
GGAAAAACAGTGTGGAGGATTGAGCGATTGGCTCCATGACTTTTGTTGAGAGCATCCTCT
TTATGAGAATGCCAATTTGTTGTACTTCCCTTTTCTCCTCTCACCGCCTTGTTGATCATG
AGTGTATATTGTGGAGTCGAGGCAACTTTCCAGGCACCAATAAAATTTGTTACCGTTTTT
ATCAGACTACTGGTTAATATTTATAATAGAGATTTACATTTAATTACTTTATATTCCATT
AGTCTTTTTCACAGTCAGTCATGGACTTACTGCCATTATATTTGTGTATAGTTCTGTTTC
TCATTCGACATTTGTAAGATCAAAATGTATAAACGACAAATTGACTGCAGTCACAAGTTT
G