Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g113560.3.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G62610.2)
Sequence

ATGGATCCACCAATTATTAATGAAGGTTCATTCTCGGCGGCGAATCCTTCTTCTTACAGT
TTGGCTGAGATTTGGCCGTTTGCCGCAGCGGCAAATGGTGGAGGAAACGGTGAACTTGGT
GGAGGAGGACTGGGACTCAGAATGAGTAGCTTTACGGGTTTGTTAGAAGCAGCTGCAAAC
TCCATTAATGAATCTACTCTGACGGAGCAGAGCAGAAGAAGCGGCGGAGCTGGTGGTGGT
GATGGTAGTGGTAGTGGTGGAGGTAATGTTGGTGTAAGGAAGAGGGATGTGAACTCGGAG
GATGATTTTTCTAAGTTTGTCTCTACTAGTGATGCTAATGATTTGTTTTCAGATTTAACG
AAGCAACTTATTGATATTCATATCAATTCGAATCATGTTCAGGATGGTTCAGTGGCCAAA
CGTTTGAAAGTTTCCCAATCTAAAGAAGAAAATGGAGTTTCAAAGGTAGAAGCAGAATCA
AGTTCTCAGACGGCTAACAAGGGGACTGAACAAAGTAGTAAACCTGAGCCACCTAAGGAT
TACATCCACGTAAGGGCAAGAAGGGGTCAAGCTACTGATAGCCACAGTTTAGCAGAGAGG
GCCAGGAGAGAAAAGATCAGCGAGAGGATGAAAATTCTGCAAGATTTGGTTCCTGGATGT
AATAAGGTTATCGGAAAAGCACTTGTTCTTGACGAAATAATAAATTATATCCAGTCACTA
CAGCGTCAAGTTGAGTTCTTGTCCATGAAGCTTGAAGCAGTCAATTCAAGGATGAACCAC
CCTATAGAAACCTTTCCTTCAAAAGATCTAGCACCATCAGCTTTTGATACGAGTGGAATG
ATTTTCGGCACTCAAGCACCGAGAGAATATGCTCAAGGGACACAATCCGAGTGGCTCCAT
ATGCAGGTTGGCAACAGCTTTGACAGAGCAACATGA

Peptide Sequence

PEP ID

Solyc03g113560.3.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G62610.2)
Sequence

MDPPIINEGSFSAANPSSYSLAEIWPFAAAANGGGNGELGGGGLGLRMSSFTGLLEAAAN
SINESTLTEQSRRSGGAGGGDGSGSGGGNVGVRKRDVNSEDDFSKFVSTSDANDLFSDLT
KQLIDIHINSNHVQDGSVAKRLKVSQSKEENGVSKVEAESSSQTANKGTEQSSKPEPPKD
YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL
QRQVEFLSMKLEAVNSRMNHPIETFPSKDLAPSAFDTSGMIFGTQAPREYAQGTQSEWLH
MQVGNSFDRAT*

Transcript Sequence

Transcript ID

Solyc03g113560.3.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT5G62610.2)
Sequence

TGAAGATTAAGAAAAATAATTCATAAATATTTGTGCGTTTGTCGCAATGATAAAAAAAAA
AGAGTTAAATTTTAACTCTTAAGTGATATAAATTGGGAAACAGCGAGTACTAAAGTGCGC
CTGGGGTTACAGTGCGCACCCTAATCTTCATCTTCCTTCCTCTCTACCTCACATCACAGT
AGTCTCTGTCTCTTTCTATGGCTTTCACTTTCACTCTCACTCTCTAATAATAAATAAACC
CAAAATATTTTCAAACCATACTCACTTTACACTTCTCTCTTCCCTCCATAATCACTTAGG
TTTTGTCATTTCACTCGTTTAGTGTTAAATAAAATTCACACTAATCCTGGTTTGTATATA
ACTGTGAATTGTTAAAAAATGGATCCACCAATTATTAATGAAGGTTCATTCTCGGCGGCG
AATCCTTCTTCTTACAGTTTGGCTGAGATTTGGCCGTTTGCCGCAGCGGCAAATGGTGGA
GGAAACGGTGAACTTGGTGGAGGAGGACTGGGACTCAGAATGAGTAGCTTTACGGGTTTG
TTAGAAGCAGCTGCAAACTCCATTAATGAATCTACTCTGACGGAGCAGAGCAGAAGAAGC
GGCGGAGCTGGTGGTGGTGATGGTAGTGGTAGTGGTGGAGGTAATGTTGGTGTAAGGAAG
AGGGATGTGAACTCGGAGGATGATTTTTCTAAGTTTGTCTCTACTAGTGATGCTAATGAT
TTGTTTTCAGATTTAACGAAGCAACTTATTGATATTCATATCAATTCGAATCATGTTCAG
GATGGTTCAGTGGCCAAACGTTTGAAAGTTTCCCAATCTAAAGAAGAAAATGGAGTTTCA
AAGGTAGAAGCAGAATCAAGTTCTCAGACGGCTAACAAGGGGACTGAACAAAGTAGTAAA
CCTGAGCCACCTAAGGATTACATCCACGTAAGGGCAAGAAGGGGTCAAGCTACTGATAGC
CACAGTTTAGCAGAGAGGGCCAGGAGAGAAAAGATCAGCGAGAGGATGAAAATTCTGCAA
GATTTGGTTCCTGGATGTAATAAGGTTATCGGAAAAGCACTTGTTCTTGACGAAATAATA
AATTATATCCAGTCACTACAGCGTCAAGTTGAGTTCTTGTCCATGAAGCTTGAAGCAGTC
AATTCAAGGATGAACCACCCTATAGAAACCTTTCCTTCAAAAGATCTAGCACCATCAGCT
TTTGATACGAGTGGAATGATTTTCGGCACTCAAGCACCGAGAGAATATGCTCAAGGGACA
CAATCCGAGTGGCTCCATATGCAGGTTGGCAACAGCTTTGACAGAGCAACATGACAGATA
CCCTAATGAATTGGAATATAGATTATTCAGGAACATTAGCCTCCCACAATTATTCATCAT
GTCTTTTAGAGAACCTTGGTACTGGATCCAGCAGCTGTGTTCCACTATAGAAGAAGCATT
CTTAAATGTGTAATCATATAATCATTTCCAGTAGAATTGTCTGTATTATCGTTGTACGAT
CAAAGTCGTCCAACTCAAGTGTACTTGTAATATGTTTGTATTGATATAAGAAATAGACTA
AGCAAACTTTATAATCTAGCTCAAAGAACAGAAATTTCTTAGTCTAGAA