Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g113500.3.1
CDS Infomation

Aminoacyl-tRNA synthetase (AHRD V3.3 *** Q2PF39_TRIPR)
Sequence

ATGTCCGACCCACAACCTTCTTCTCCGATCCAACACCAAACGAACCACACCCACAACGAA
AACTCCCAAAACAAACCTTCCCATTCACCGGAGAAGAAAAGTTCACAGAATAACTTTAAC
AGTAATAGTAATGCTAATAATAGTAGTAGTAATATAGTTAGGAGAGAGAGGCCCGCGAGG
GAGTGTACCAAAAGGGCTGCGGCGAGGTTACAGGCAGCAGCAGCAGCAGAGGCGGAGGCT
GCTACTAAGGTAAGGAAGAAAAAGACTGCAGGTAGGAAAGAAAGGCTAGCGGCTAGGTTG
TTGAGGGAGGAGGAGGATGAAGAGAAGTCCCAAGAAGGTGATGACGAGGAGGAGGTAGAG
GAAGGTGAAAATGGGTCGCCTTCTTCGCGGCAACAATGCGGAAAGATTGTCACACAGCTT
GTGGGAGAGCCTGAACCATCACAGTTGCCTCGGTGGAATATACGTTCCATGTGGCAGTTA
GCTTCCATATTGAATTTCTTGAATGTTTTTAGGCCTTTGTTGAATATCAGAGTGGAGTTT
TCAGCTGAGGAATTTGAAACAGCATTGATTACTCCGAATGATACACTTGGTCATATACAT
ATGCCATTGCTAAAGGCAATCCCGCCGGTTACTCGAATGGCACTTGGACACAATACATGG
ATTACTGTTTTGTGCAGAAAATTAAGAGATTGGTGGCATTGGGTTGCAGAGGGGGAACTA
CCTATAGTTGCAGCACAAGGGGCTGAAATTGAAGCATATAGTGCACTAGATCCTGCAGTC
CGTGTGGTGATTTTGAAAGCATTGTGTGATATTCGTGTTGAGCAAGAAGATATTCGTAAC
TACATTGACGAAAACTTGAAACAAGGTGTTCACCTATCACTATTCCGAAAAGAACGTATT
GGTGGTGATTCTCATGGAATTTCTTACTGGTACGAGAATGATCCCATAATTGGGCATCGA
CTGTACCGGGAGATTAGAAAGATTGAAATCAAGAAAGGAAAGGGAAAGACTGTTCCACAA
ATACCTAGCTCATGTTATCAGTGGGAAACTGTTGCAACTAACTTGGACGAATTCCAGGAT
GTTTCTGAGAAGCTGTTCTCGAGCAAAAATAGAACAGAGGCTTCTGTTGGAAAGAAGTTG
AAAAATGACATGCTTGCTGAGGTTGAGAGCGTCCACAAGAAAAAAGAGAAATTGCTGAAG
AAACAACATAGACAGGCATTGATGCTTGATAACATGCTAAATATGGATGGTCTTTCTGGT
GGACGCTCCTTGCGGGATAGGAAGCCTGTCACCTACACATTTGATGATTATGATCGGTCA
ATTAATGAGGCTATCAAGATAACCAAGAACGGTCAACCATCTGCAGAACCTGCTTTGAGG
AGAGATCCTGCTACAAGGCATGAAACTTCTACAAATGGTAGATTGGGTAGTCCTCCTCAC
TTGTCACAACACGTGTCTTTCAGAGTGCGTTCTCCTAAATCACCCGAATACGATGAATAT
GATGAAGACCATAACGATGAACAATTAGATCGGAGCAACCGTAGGAGGCAGAGACCCCAA
CGCTATTCTGCATCAGAGTTTATTGAAGAATTGTCTGAAAATGAGGCAGATTTTGACAGT
GATGATGATATAATGGGTGAAGCAGTTTATGATGAAGAATATTTAAGGAAACGGAAACAG
CGGAAGGTGTCAAGTAGCTCAGAAGGAGATGATGAGTACCATTGGGACGAAGAAAATCCT
GAAGATGAAGAAGAGGAATATGAAGATGAAGATTCCCCAAGTGCTAGTGAGGAGAGCGAT
GAACCTCGGAGTCGGAGATTTAAGAAACTGCCGGGCCGCACAAGAAGAGAAACCAAGTTG
AGGTCAGTGGGCAACCTTCAGTCAGGTTTAAGACGCAGTAACAGGGCAACCAGAAACCGC
ATCAACTATAGCAATTTAGAGATGTCAGAATCAGAGTCTGAGTCAACGAAACCTGAGAAG
TCAAATGGATCCGAAGAGCATTATGATGCAAGTGATAATGCAGAGTTCTCAATGGGAAGT
GATGAAACAGAGGAAAACAATGACAATGAGGAGACGAAAGTTGAGCAACCGGTTAATGAT
GTGCCTTCTGAGATGGCAACAGTTGATCAAAATGATGTACCAAAGAGAACAAGCAGTCCA
GATCAAGATCAAGAGGATGTTGAAAGTGGAGGGAAAAGGCACTTTCTTGATCTCAATGAG
CTTGCCCCGGGTCCTGGATTCAATGATGGCCCTAATTCAGTGATGAAAGATGAAGGTGCA
GATGACTTCTGA

Peptide Sequence

PEP ID

Solyc03g113500.3.1
PEP Infomation

Aminoacyl-tRNA synthetase (AHRD V3.3 *** Q2PF39_TRIPR)
Sequence

MSDPQPSSPIQHQTNHTHNENSQNKPSHSPEKKSSQNNFNSNSNANNSSSNIVRRERPAR
ECTKRAAARLQAAAAAEAEAATKVRKKKTAGRKERLAARLLREEEDEEKSQEGDDEEEVE
EGENGSPSSRQQCGKIVTQLVGEPEPSQLPRWNIRSMWQLASILNFLNVFRPLLNIRVEF
SAEEFETALITPNDTLGHIHMPLLKAIPPVTRMALGHNTWITVLCRKLRDWWHWVAEGEL
PIVAAQGAEIEAYSALDPAVRVVILKALCDIRVEQEDIRNYIDENLKQGVHLSLFRKERI
GGDSHGISYWYENDPIIGHRLYREIRKIEIKKGKGKTVPQIPSSCYQWETVATNLDEFQD
VSEKLFSSKNRTEASVGKKLKNDMLAEVESVHKKKEKLLKKQHRQALMLDNMLNMDGLSG
GRSLRDRKPVTYTFDDYDRSINEAIKITKNGQPSAEPALRRDPATRHETSTNGRLGSPPH
LSQHVSFRVRSPKSPEYDEYDEDHNDEQLDRSNRRRQRPQRYSASEFIEELSENEADFDS
DDDIMGEAVYDEEYLRKRKQRKVSSSSEGDDEYHWDEENPEDEEEEYEDEDSPSASEESD
EPRSRRFKKLPGRTRRETKLRSVGNLQSGLRRSNRATRNRINYSNLEMSESESESTKPEK
SNGSEEHYDASDNAEFSMGSDETEENNDNEETKVEQPVNDVPSEMATVDQNDVPKRTSSP
DQDQEDVESGGKRHFLDLNELAPGPGFNDGPNSVMKDEGADDF*

Transcript Sequence

Transcript ID

Solyc03g113500.3.1
Transcript Infomation

Aminoacyl-tRNA synthetase (AHRD V3.3 *** Q2PF39_TRIPR)
Sequence

ATTTTTCAACAATAAAAATTAGTATTAAAAAAATATTTATTACTACTGAATTTATCTTTT
TGAGATACTCTTTGTATTTTCTTACACAAGCTTATTAATAGAGTGATAACTGATCCAAGC
ACTCAACACATGTGACACTCAGCTTGTCTATTGTTCTTTACTACATATATGATGAGGTGC
AACAAGTTTTGTGCTTTTAAATACTAATTTCAAGTCACATATTTATTTTTAAAATTTTAA
ATATACATATTATCATGACAATATATCTATCTTTTTAATTTAATCGTGTCGCACGTATAA
ATTATTTAACATTAGTTATAATAAATACTTAAAAAATTATTATACAATTCGTCTTAAACA
TCAATAATCATTTTTTATAATAATATTTCACTATAATTACCTAATCTTCTTCCAAATCAA
TGGAATCTTCATGTGGTCAAGAATTTTTATAACCCCCCCCCCCCCACACACACACACACA
CTCTTTTTAACATTATAGGGAAACAATCCTACTTTCTTTTGCCATTCTTCACTAGTTGAC
CTGAGCACCTGGCACATTTTTTCTATCAAAAAAAATAAATACTACACCAACAACACCTAC
ACGGCGTCGTTTTATGCTTCTTTTTTATGAAAACCCTTGCCCTTGTGTCCTCTATGCAGA
ATTCATAATTTTTTTCATTCACAAATCACAATATAAATAAATGCCAAAAGTTGTCATATT
TACCAATTTTAGTCCCTAAATTTACCATTGGAGTCACCAATCTCTCATCACACTTTCCCT
TTTACCCCCTAAAATAGTTTTCTCAGATATCCCTAAATTCTCTTCTCCCTTCTCCGTCTT
CCCTAAATTTCTCTTTCGAAAACCAACACGAAACACAACAAAAAGCTCGAATCTTTTTTT
GCTTATTATCACCTTAATTATTGCAAGATTATTATTACCCATGTTCCATTTTTCTGGATG
ATGTTTTCTTTTTACAGTTGCAGTGGCAGGAACTTTGCAGTTCTTGATAATATTTCAAAC
CAAAAACCCCAGCTTTCTTCTTCTTCAAACTTGTTCTGTATAGGCTTCTTTTTCTTCAAT
GCAACCCCACGATCTCTACCTCTAAACCCTTCATAGTCAATCCATTCTCCGATCCCCTCA
TTATCATGTCCGACCCACAACCTTCTTCTCCGATCCAACACCAAACGAACCACACCCACA
ACGAAAACTCCCAAAACAAACCTTCCCATTCACCGGAGAAGAAAAGTTCACAGAATAACT
TTAACAGTAATAGTAATGCTAATAATAGTAGTAGTAATATAGTTAGGAGAGAGAGGCCCG
CGAGGGAGTGTACCAAAAGGGCTGCGGCGAGGTTACAGGCAGCAGCAGCAGCAGAGGCGG
AGGCTGCTACTAAGGTAAGGAAGAAAAAGACTGCAGGTAGGAAAGAAAGGCTAGCGGCTA
GGTTGTTGAGGGAGGAGGAGGATGAAGAGAAGTCCCAAGAAGGTGATGACGAGGAGGAGG
TAGAGGAAGGTGAAAATGGGTCGCCTTCTTCGCGGCAACAATGCGGAAAGATTGTCACAC
AGCTTGTGGGAGAGCCTGAACCATCACAGTTGCCTCGGTGGAATATACGTTCCATGTGGC
AGTTAGCTTCCATATTGAATTTCTTGAATGTTTTTAGGCCTTTGTTGAATATCAGAGTGG
AGTTTTCAGCTGAGGAATTTGAAACAGCATTGATTACTCCGAATGATACACTTGGTCATA
TACATATGCCATTGCTAAAGGCAATCCCGCCGGTTACTCGAATGGCACTTGGACACAATA
CATGGATTACTGTTTTGTGCAGAAAATTAAGAGATTGGTGGCATTGGGTTGCAGAGGGGG
AACTACCTATAGTTGCAGCACAAGGGGCTGAAATTGAAGCATATAGTGCACTAGATCCTG
CAGTCCGTGTGGTGATTTTGAAAGCATTGTGTGATATTCGTGTTGAGCAAGAAGATATTC
GTAACTACATTGACGAAAACTTGAAACAAGGTGTTCACCTATCACTATTCCGAAAAGAAC
GTATTGGTGGTGATTCTCATGGAATTTCTTACTGGTACGAGAATGATCCCATAATTGGGC
ATCGACTGTACCGGGAGATTAGAAAGATTGAAATCAAGAAAGGAAAGGGAAAGACTGTTC
CACAAATACCTAGCTCATGTTATCAGTGGGAAACTGTTGCAACTAACTTGGACGAATTCC
AGGATGTTTCTGAGAAGCTGTTCTCGAGCAAAAATAGAACAGAGGCTTCTGTTGGAAAGA
AGTTGAAAAATGACATGCTTGCTGAGGTTGAGAGCGTCCACAAGAAAAAAGAGAAATTGC
TGAAGAAACAACATAGACAGGCATTGATGCTTGATAACATGCTAAATATGGATGGTCTTT
CTGGTGGACGCTCCTTGCGGGATAGGAAGCCTGTCACCTACACATTTGATGATTATGATC
GGTCAATTAATGAGGCTATCAAGATAACCAAGAACGGTCAACCATCTGCAGAACCTGCTT
TGAGGAGAGATCCTGCTACAAGGCATGAAACTTCTACAAATGGTAGATTGGGTAGTCCTC
CTCACTTGTCACAACACGTGTCTTTCAGAGTGCGTTCTCCTAAATCACCCGAATACGATG
AATATGATGAAGACCATAACGATGAACAATTAGATCGGAGCAACCGTAGGAGGCAGAGAC
CCCAACGCTATTCTGCATCAGAGTTTATTGAAGAATTGTCTGAAAATGAGGCAGATTTTG
ACAGTGATGATGATATAATGGGTGAAGCAGTTTATGATGAAGAATATTTAAGGAAACGGA
AACAGCGGAAGGTGTCAAGTAGCTCAGAAGGAGATGATGAGTACCATTGGGACGAAGAAA
ATCCTGAAGATGAAGAAGAGGAATATGAAGATGAAGATTCCCCAAGTGCTAGTGAGGAGA
GCGATGAACCTCGGAGTCGGAGATTTAAGAAACTGCCGGGCCGCACAAGAAGAGAAACCA
AGTTGAGGTCAGTGGGCAACCTTCAGTCAGGTTTAAGACGCAGTAACAGGGCAACCAGAA
ACCGCATCAACTATAGCAATTTAGAGATGTCAGAATCAGAGTCTGAGTCAACGAAACCTG
AGAAGTCAAATGGATCCGAAGAGCATTATGATGCAAGTGATAATGCAGAGTTCTCAATGG
GAAGTGATGAAACAGAGGAAAACAATGACAATGAGGAGACGAAAGTTGAGCAACCGGTTA
ATGATGTGCCTTCTGAGATGGCAACAGTTGATCAAAATGATGTACCAAAGAGAACAAGCA
GTCCAGATCAAGATCAAGAGGATGTTGAAAGTGGAGGGAAAAGGCACTTTCTTGATCTCA
ATGAGCTTGCCCCGGGTCCTGGATTCAATGATGGCCCTAATTCAGTGATGAAAGATGAAG
GTGCAGATGACTTCTGATGTCCTTCCCTGAGATCTTGTTGCTTGTAGTTTGGTCTTGCAA
GCTGATTATATGATAGTTAACTCTGAATCCACTCCATGATGGAAGCAAAGGAGTTCCGTT
TCCCATGGAAAGT