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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g113280.3.1
CDS Infomation

Integral membrane HPP family protein (AHRD V3.3 *** AT3G47980.1)
Sequence

ATGAATGCGCAGCTTCATCTCCGTTGTAATCATTGCATTTTGCTTCCACCGACGTCCTTT
TCGTCTTCACACACATTTTCTGTACTGAATTGTTCAAATGAAAACAGAATCATAGGACTT
GGGAGATTGGGTTTGAAGGAAAGAATATTAGCAGACAGGAGAGTAAGTAGAAGAAAGAAT
TCATGTCGTTTGGGCATTAGAGCATCGGCAGGAGTATGGGATGGTTGGATGCCAGAAAAG
TCTTCGAAAGCTCCTCCGCTAAGTGACATTATTTGGCCTTCTGCAGGGGCATTTGCGGCA
ATGGCAATGCTAGGAAAAATAGACCAAATACTGGCAGCTAAAGGGATATCTATGACTATA
GCTCCACTAGGAGCTGTTTGTGCTGTACTATTTGCTACTCCTGCTTCTCCCGGTGCTAGG
AAATACAATATGTTTATGGCACAAATCGGTTGTGCAGCCATTGGTGTTTTGGCATTCACA
ATATTGGGCCCAGGTTGGCTAGCTCGAAGCACCGCCCTTTCTGCTGCAATGGCTTTCATG
ATTTATACTCGCTCTGTTCATCCTCCTGCTGCAAGTTTGCCGCTGTTATTCATTGATGGA
GCTAAGTTGCATCAGCTCAACTATTGGTATGCTCTGTTCCCTGGCGCTGCTGGATGCATT
CTTCTCTGTTTAATACAAGAGATTGTGTGTTACCTAAAAGAGAATGTCAAATTCTGA

Peptide Sequence

PEP ID

Solyc03g113280.3.1
PEP Infomation

Integral membrane HPP family protein (AHRD V3.3 *** AT3G47980.1)
Sequence

MNAQLHLRCNHCILLPPTSFSSSHTFSVLNCSNENRIIGLGRLGLKERILADRRVSRRKN
SCRLGIRASAGVWDGWMPEKSSKAPPLSDIIWPSAGAFAAMAMLGKIDQILAAKGISMTI
APLGAVCAVLFATPASPGARKYNMFMAQIGCAAIGVLAFTILGPGWLARSTALSAAMAFM
IYTRSVHPPAASLPLLFIDGAKLHQLNYWYALFPGAAGCILLCLIQEIVCYLKENVKF*

Transcript Sequence

Transcript ID

Solyc03g113280.3.1
Transcript Infomation

Integral membrane HPP family protein (AHRD V3.3 *** AT3G47980.1)
Sequence

TATTGAAGAGTCTCGTCCCATCCCAATTTCCAACTTCCACCCAAATTGGTATCTTTGTTC
TAAACTTGAACCGCCCTAATTCACCCAAATCTAAAATTAAAATTCAAAAAATTGTACATT
CTGTCTTGTTCATATGTCACTGCTCTATTTTGCGTAGAAATCGGGGGAAAAAAAAATGAA
TGCGCAGCTTCATCTCCGTTGTAATCATTGCATTTTGCTTCCACCGACGTCCTTTTCGTC
TTCACACACATTTTCTGTACTGAATTGTTCAAATGAAAACAGAATCATAGGACTTGGGAG
ATTGGGTTTGAAGGAAAGAATATTAGCAGACAGGAGAGTAAGTAGAAGAAAGAATTCATG
TCGTTTGGGCATTAGAGCATCGGCAGGAGTATGGGATGGTTGGATGCCAGAAAAGTCTTC
GAAAGCTCCTCCGCTAAGTGACATTATTTGGCCTTCTGCAGGGGCATTTGCGGCAATGGC
AATGCTAGGAAAAATAGACCAAATACTGGCAGCTAAAGGGATATCTATGACTATAGCTCC
ACTAGGAGCTGTTTGTGCTGTACTATTTGCTACTCCTGCTTCTCCCGGTGCTAGGAAATA
CAATATGTTTATGGCACAAATCGGTTGTGCAGCCATTGGTGTTTTGGCATTCACAATATT
GGGCCCAGGTTGGCTAGCTCGAAGCACCGCCCTTTCTGCTGCAATGGCTTTCATGATTTA
TACTCGCTCTGTTCATCCTCCTGCTGCAAGTTTGCCGCTGTTATTCATTGATGGAGCTAA
GTTGCATCAGCTCAACTATTGGTATGCTCTGTTCCCTGGCGCTGCTGGATGCATTCTTCT
CTGTTTAATACAAGAGATTGTGTGTTACCTAAAAGAGAATGTCAAATTCTGATGTACAAA
GTCAAGTGGATGCATTTCGGTTTATATTTGTGAATAAGATCATGTGATTCTCATTCAACC
CAGAAACTGTATTTGTGAATAACATATATCATTCTGGAAACTGTCAGCATCATATTATTG
TACTATATATTAAATATTATCAGAAAAATATCACTAATTTGTGATCATCATAATATTATT
ACTTATTACTTGAAGATTTTACCAATATTGTTTGTCAAGACGGAAAATCATACACTAGTT
ACTAGTACACTATAAAGGATACAACTTTAGCAAGATCCCC