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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g112970.1.1
CDS Infomation

Pectinesterase (AHRD V3.3 *-* B9GXZ7_POPTR)
Sequence

ATGGATGAATCCGATAGCACAAAGTACATAGAAAGCCTTCTGCAAAATGAAAACTCCTTT
TCAAGAACCAAAAGGAAACTACGATTGATAATCTGTCTGGTAACTCTGTTCAGTCTCATA
GTTGCTGCAATTATCTCTGCTTCAATAATACTTAAACAAGAAACAGAGTCCAAATCACTG
TTGTTTAATCCAACAGACGCTATTAGAAACGTCTGTTATCTCATCAGCGATGATCCATAC
TCATGTTATGACTCCATTGCTGCACTTTCAGATACCCTGATCTCCTCCAGAGATAAAATT
AACCTATCTCGGATCTTCATCCTTTCACTTTATGCTTCACGAATCGAGCTTGAGAATGTC
GCTTCTTCACTTGAAAAAGCAATACACATGATTGACACCAAGAGAGTTGGGGTATTGAGG
AATTGCCAAGGAATGGTCAAATTATCTCTGAAGCAACTCAATGAATCGGAAATGAGTTTG
GGTATCGATCCAGATGAGAAAATTTTGGCGATTAATAAAGTTGTTTGGGATTTACGGCGG
TGGATGGGCGAGGCCATGGATCAAGTACAAAGGTGCACTGATTTGTTGGAGGAGATTCCG
TTGACAGTTATGGTGGAAATAAAAGAGAAAAGCTACGCAGCCCAGCAAAACATGATGAAT
AGCATAGAAATATTGCATAAAAAAGAAGACAATTTCGATCTGTTTTACCCGAGAATTGGA
TCTGCATTAGGCTCTTTGTTTTGGGAATTTGAATATGGCCTAAATGTGTGGCTCCTTTGC
TTTGGGTATTTGCTCTTGATTTTTCTTTTTTGCCTGTTGTTACGAATATATTGA

Peptide Sequence

PEP ID

Solyc03g112970.1.1
PEP Infomation

Pectinesterase (AHRD V3.3 *-* B9GXZ7_POPTR)
Sequence

MDESDSTKYIESLLQNENSFSRTKRKLRLIICLVTLFSLIVAAIISASIILKQETESKSL
LFNPTDAIRNVCYLISDDPYSCYDSIAALSDTLISSRDKINLSRIFILSLYASRIELENV
ASSLEKAIHMIDTKRVGVLRNCQGMVKLSLKQLNESEMSLGIDPDEKILAINKVVWDLRR
WMGEAMDQVQRCTDLLEEIPLTVMVEIKEKSYAAQQNMMNSIEILHKKEDNFDLFYPRIG
SALGSLFWEFEYGLNVWLLCFGYLLLIFLFCLLLRIY*

Transcript Sequence

Transcript ID

Solyc03g112970.1.1
Transcript Infomation

Pectinesterase (AHRD V3.3 *-* B9GXZ7_POPTR)
Sequence

ATGGATGAATCCGATAGCACAAAGTACATAGAAAGCCTTCTGCAAAATGAAAACTCCTTT
TCAAGAACCAAAAGGAAACTACGATTGATAATCTGTCTGGTAACTCTGTTCAGTCTCATA
GTTGCTGCAATTATCTCTGCTTCAATAATACTTAAACAAGAAACAGAGTCCAAATCACTG
TTGTTTAATCCAACAGACGCTATTAGAAACGTCTGTTATCTCATCAGCGATGATCCATAC
TCATGTTATGACTCCATTGCTGCACTTTCAGATACCCTGATCTCCTCCAGAGATAAAATT
AACCTATCTCGGATCTTCATCCTTTCACTTTATGCTTCACGAATCGAGCTTGAGAATGTC
GCTTCTTCACTTGAAAAAGCAATACACATGATTGACACCAAGAGAGTTGGGGTATTGAGG
AATTGCCAAGGAATGGTCAAATTATCTCTGAAGCAACTCAATGAATCGGAAATGAGTTTG
GGTATCGATCCAGATGAGAAAATTTTGGCGATTAATAAAGTTGTTTGGGATTTACGGCGG
TGGATGGGCGAGGCCATGGATCAAGTACAAAGGTGCACTGATTTGTTGGAGGAGATTCCG
TTGACAGTTATGGTGGAAATAAAAGAGAAAAGCTACGCAGCCCAGCAAAACATGATGAAT
AGCATAGAAATATTGCATAAAAAAGAAGACAATTTCGATCTGTTTTACCCGAGAATTGGA
TCTGCATTAGGCTCTTTGTTTTGGGAATTTGAATATGGCCTAAATGTGTGGCTCCTTTGC
TTTGGGTATTTGCTCTTGATTTTTCTTTTTTGCCTGTTGTTACGAATATATTGA