Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g112270.3.1
CDS Infomation

Leucine-rich repeat-containing protein, putative (AHRD V3.3 *** B9RAU9_RICCO)
Sequence

ATGGATCCGAACCCTACCAAATTCCCAATTCTCTCCTACGTCATGTCCAAGCTACCCAGT
ATGGGCCGTAGAACCACCGCCACCGCCGATGAATTCGACATCGAACAGCCACAGAACCAC
CCTCAGCCTCCTCCAGAACCACACTTCGACATTACCGAGCGTATGCCTCATCTCACTGAC
CCTAAGGTTGTCAGCGCTATGCGATCAGCCGTTGCTGACGTGTCACAGACCCGGTCAATG
CTCAAAACCCTGGGTGAGCGGCCTTTTCACGAGCTTGTTGATACTGCCAGGGTGAAGTTA
GCTGAGATCGATGCCGATATGTCCAAGCGTCTTGAGGAGATTGTCTTGTCTCCACGTCCG
CCGGAGATGGAGAGGCAGGATTGGAGATTGGACATGGCGATTAAAGAGGATGAGTGTCGA
AAGGGTGTGGAGAAGGAGAGAGAGGAGTATAAGGCGTTGATAGCTTTGGATGAATTGCAT
GAGGCCTATGAGAAGATGTTGAAGGATGCGGAACAGAGGTTGGAGAAGATATATGAGACT
GCTGTTGCTGGTGGTGATGTGGAATCAATTGGAGAGTCTTCTGGTGAGAAGAGTTCTGAG
TTGAAAGAGGAAGTGAATGAGGAAGTGATCAGGATTTTGCAGGAGGCATCAGGCAAGAGT
GTGGAAAGGGTTGATTTGTCAGGCAGGCAGCTGAGGATGCTGCCTGAAGCTTTTGGGAAG
ATTCACTCCTTAATAGTGCTAAATCTGTCCAACAACCAGCTTAAGGTGGTTCCTGATTCA
ATTGCGAGCTTGGAACACCTTGAGGAGCTGCACCTTTCTTCAAATATTTTGGAATCGCTG
CCAGACTCCATTGGTCTGTTGTGTAATTTGAAGATCTTAGATGTCTCTGGAAACAAACTT
GTCGCTTTGCCAGATAGCATTTGTCATTGCAGGTCGTTAGTGGAATTTGATGCAGGCTTC
AACAAGCTTTCTTATTTGCCAACAAATATTGGCTATGAACTGGTAAATCTGCAAAGGCTT
TCACTTTCTTTTAATAAGCTCCGCTCGTTACCCACTTCCTTTGGTGAGATGAAGTCCCTG
CGCCTTCTAGATGTGCACTTTAATGAACTACATGGGCTTCCACTTTCATTTGGGAACTTG
ACAAATCTTGAGATCGTCAACTTGAGCAACAATTTTAGTGACCTAACTAAGCTTCCTGAC
ACAATTGGTGACTTGATAAATCTCAAGGAACTTGATCTGAGCAACAACCAGATCCATGAA
CTGCCTGACACAATTAGCCGGCTTGACAACCTAACTGTGCTTAAGTTGGATGAAAATCCT
CTTGTGATACCTCCAAAGGAAGTCGTAGTTGAGGGGGTTGAAGCTGTAAAGGCTTATATG
ATTAAGCGGCGGCTTGACATATTATTGGCAGAAGACCCAGAAATTATGCTTGAAGAGGTG
GGGCAGACACCGACAGGCTTATTAACTCGAAGTACCTCCTGGTTGAGTGGTACTGTTTCA
AATGTTCTTGGAACTGTTGCAGGGTATTTGGGTGGTGGAGGGAAGTCAGATCCAGACCAT
TATCTCAACCAACAGTTATGA

Peptide Sequence

PEP ID

Solyc03g112270.3.1
PEP Infomation

Leucine-rich repeat-containing protein, putative (AHRD V3.3 *** B9RAU9_RICCO)
Sequence

MDPNPTKFPILSYVMSKLPSMGRRTTATADEFDIEQPQNHPQPPPEPHFDITERMPHLTD
PKVVSAMRSAVADVSQTRSMLKTLGERPFHELVDTARVKLAEIDADMSKRLEEIVLSPRP
PEMERQDWRLDMAIKEDECRKGVEKEREEYKALIALDELHEAYEKMLKDAEQRLEKIYET
AVAGGDVESIGESSGEKSSELKEEVNEEVIRILQEASGKSVERVDLSGRQLRMLPEAFGK
IHSLIVLNLSNNQLKVVPDSIASLEHLEELHLSSNILESLPDSIGLLCNLKILDVSGNKL
VALPDSICHCRSLVEFDAGFNKLSYLPTNIGYELVNLQRLSLSFNKLRSLPTSFGEMKSL
RLLDVHFNELHGLPLSFGNLTNLEIVNLSNNFSDLTKLPDTIGDLINLKELDLSNNQIHE
LPDTISRLDNLTVLKLDENPLVIPPKEVVVEGVEAVKAYMIKRRLDILLAEDPEIMLEEV
GQTPTGLLTRSTSWLSGTVSNVLGTVAGYLGGGGKSDPDHYLNQQL*

Transcript Sequence

Transcript ID

Solyc03g112270.3.1
Transcript Infomation

Leucine-rich repeat-containing protein, putative (AHRD V3.3 *** B9RAU9_RICCO)
Sequence

ATGGATCCGAACCCTACCAAATTCCCAATTCTCTCCTACGTCATGTCCAAGCTACCCAGT
ATGGGCCGTAGAACCACCGCCACCGCCGATGAATTCGACATCGAACAGCCACAGAACCAC
CCTCAGCCTCCTCCAGAACCACACTTCGACATTACCGAGCGTATGCCTCATCTCACTGAC
CCTAAGGTTGTCAGCGCTATGCGATCAGCCGTTGCTGACGTGTCACAGACCCGGTCAATG
CTCAAAACCCTGGGTGAGCGGCCTTTTCACGAGCTTGTTGATACTGCCAGGGTGAAGTTA
GCTGAGATCGATGCCGATATGTCCAAGCGTCTTGAGGAGATTGTCTTGTCTCCACGTCCG
CCGGAGATGGAGAGGCAGGATTGGAGATTGGACATGGCGATTAAAGAGGATGAGTGTCGA
AAGGGTGTGGAGAAGGAGAGAGAGGAGTATAAGGCGTTGATAGCTTTGGATGAATTGCAT
GAGGCCTATGAGAAGATGTTGAAGGATGCGGAACAGAGGTTGGAGAAGATATATGAGACT
GCTGTTGCTGGTGGTGATGTGGAATCAATTGGAGAGTCTTCTGGTGAGAAGAGTTCTGAG
TTGAAAGAGGAAGTGAATGAGGAAGTGATCAGGATTTTGCAGGAGGCATCAGGCAAGAGT
GTGGAAAGGGTTGATTTGTCAGGCAGGCAGCTGAGGATGCTGCCTGAAGCTTTTGGGAAG
ATTCACTCCTTAATAGTGCTAAATCTGTCCAACAACCAGCTTAAGGTGGTTCCTGATTCA
ATTGCGAGCTTGGAACACCTTGAGGAGCTGCACCTTTCTTCAAATATTTTGGAATCGCTG
CCAGACTCCATTGGTCTGTTGTGTAATTTGAAGATCTTAGATGTCTCTGGAAACAAACTT
GTCGCTTTGCCAGATAGCATTTGTCATTGCAGGTCGTTAGTGGAATTTGATGCAGGCTTC
AACAAGCTTTCTTATTTGCCAACAAATATTGGCTATGAACTGGTAAATCTGCAAAGGCTT
TCACTTTCTTTTAATAAGCTCCGCTCGTTACCCACTTCCTTTGGTGAGATGAAGTCCCTG
CGCCTTCTAGATGTGCACTTTAATGAACTACATGGGCTTCCACTTTCATTTGGGAACTTG
ACAAATCTTGAGATCGTCAACTTGAGCAACAATTTTAGTGACCTAACTAAGCTTCCTGAC
ACAATTGGTGACTTGATAAATCTCAAGGAACTTGATCTGAGCAACAACCAGATCCATGAA
CTGCCTGACACAATTAGCCGGCTTGACAACCTAACTGTGCTTAAGTTGGATGAAAATCCT
CTTGTGATACCTCCAAAGGAAGTCGTAGTTGAGGGGGTTGAAGCTGTAAAGGCTTATATG
ATTAAGCGGCGGCTTGACATATTATTGGCAGAAGACCCAGAAATTATGCTTGAAGAGGTG
GGGCAGACACCGACAGGCTTATTAACTCGAAGTACCTCCTGGTTGAGTGGTACTGTTTCA
AATGTTCTTGGAACTGTTGCAGGGTATTTGGGTGGTGGAGGGAAGTCAGATCCAGACCAT
TATCTCAACCAACAGTTATGACTTATGAGGCTAATGATTTCTTTCCTTTTAAGCCTTTTC
ACTTCTCTCTGTTTCCGTTGAAACAATATGGTTAATATGGACCAGCTACCCCTTCCCTTT
CCTTTTTTTTAAAAAAATTCAGTTTGATTTGTGAAGAGAATTGAAGGATGATGGTGTTTT
GCAGTCTGAACATTTATATGTTACAATAATACATAGTGTTTTTTACTCTCTAGCTTCTAA
AAATGTCTGTGTTGAATGTTTTAGTCAGACTTGACGATGGGTCAAGGCCCAATTGCAG