Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g112075.1.1
CDS Infomation

D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** K4BK61_SOLLC)
Sequence

ATGGCGGCTTCACCTTCTTCAACTATGATTTTATCTTCAAAATCTTCACGCGCCTCTCTC
TCATGGAAAAACCAGCTCGCTTCTACCTCTGCCTTTCGTGTCTCCGCGGTTACTCTCCCG
CGCAGAAGCCCCCGTCAGTGTCCGAGGTTTGTCGTTTTCTCAATGGACGCCAAACCTACG
GTTCTCGTTGCTGAAAAACTAGGCGAGGCTGGGCTGAAACTTTTAAAGGAATTCGCGAAT
GTTGATTGCTCATATAACTTGACTCCTGAGGAGCTGTGCACTAAGATCTCTCTTTGTGAT
GCGTTGGTTGTGAGGAGCGGAACAAAGGTGACCCGTGAGATCTTTGAATCTTCTGGTGGA
CGGCTGAAGGTTGTTGGACGTGCTGGTGTGGGGATTGATAACGTTGATCTTGCGGCGGCA
ACAGAGCATGGATGCCTTGTTGTTAATGCGCCCACTGCTAATACAGTTGCAGCTGCCGAG
CATGGAATCGCCCTTCTCACAGCTATGGCTCGGAATGTTGCTCAAGCTGATGCTTCTGTC
AAAGCTGGGAAATGGTTGAGGAACAAATATGTTGGTGTCTCCCTAGTAGGCAAAACACTT
GCTGTGATGGGTTTTGGGAAGGTTGGATCAGAAGTCGCAAGGCGAGCTAAGGGGCTTGGC
ATGCATGTCATTGCTCATGACCCATACGCCCCTGCTGACCGTGCACGTGCTATTGGTGTG
CAGCTTGTGAGCTTTGATGAAGCCCTTGCTTCTGCAGATTTCATCTCACTTCACATGCCT
CTGACCCCTGCTACAAAGCAGATCCTGAATGATGAAACTTTTGCGAAGATGAAAAAGGGT
GTACGGATTGTGAATGTTGCTCGTGGGGGTGTGATTGATGAAGAAGCTTTGGTGAGGGCA
CTTGATGCAGGCATTGTGGCACAGGCAGCACTTGATGTTTTCACTGTGGAGCCGCCACCA
AAGGATAGCAAGTTGATTCAACATGAGAATGTGACTGCAACTCCACATCTTGGTGCTAGT
ACTACAGAGGCTCAGGAAGGTGTGGCAATTGAGGTCGCTGAAGCAGTTGTTGGCGCTTTG
AAAGGGGAACTCTCAGCTACTGCTGTCAATGCACCTATGGTTCCTGCTGAGGTGCTATTA
GAGCTTAAGCCTTTTGTTGTACTTGCTGAAAAACTTGGTAGACTTGCTGTCCAGTTGGTT
GCCGGTGGAAGTGGTGTTAAATCAGTGAAAGTAACATATGGTTCAGCTAGAGCACCTGAT
GATCTTGATACAAGATTGCTTCGTGCCATGATAACTAAAGGCATGATTGAGCCAATTTCC
AGTGTTTTCATTAACTTAGTTAATGCAGATTTCACTGCTAAACAAAGGGGACTACAGATA
TCTGAAGAACGACTTATCCTAGATGGTTCACCAGAAAGTCCAGTTGAGTTCATTCAGGTT
CAGATAGCCAATGTAGAATCCAAGTTTGCCAGTGCTATTTCAGACTTGGGAGAGATTAGA
GTGGAGGGTAGAGTTAAGGATGGAGTACCTCATTTGACAAAGGTGGGTTCTTTTGAAGTG
GATGTGAGCTTGGAAGGCAGTATCATTCTTTGCAGTCAGGTTGATCAGCCAGGAATGATT
GGAAAAGTGGGTAGCGTCTTGGGTGAGGAGAATGTGAATGTCAGCTTCATGAGCGTTGGA
AGAGTTGCTCCTAGAAAGCAAGCTGTTATGGCTATTGGGGTGGATGAACAACCCAGCAAG
GAGTCACTGAAAAGGATTGGGGAAATTCCTGCCATCCAGGAGTTCGTTTACCTTGGATTA
TAG

Peptide Sequence

PEP ID

Solyc03g112075.1.1
PEP Infomation

D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** K4BK61_SOLLC)
Sequence

MAASPSSTMILSSKSSRASLSWKNQLASTSAFRVSAVTLPRRSPRQCPRFVVFSMDAKPT
VLVAEKLGEAGLKLLKEFANVDCSYNLTPEELCTKISLCDALVVRSGTKVTREIFESSGG
RLKVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLTAMARNVAQADASV
KAGKWLRNKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGV
QLVSFDEALASADFISLHMPLTPATKQILNDETFAKMKKGVRIVNVARGGVIDEEALVRA
LDAGIVAQAALDVFTVEPPPKDSKLIQHENVTATPHLGASTTEAQEGVAIEVAEAVVGAL
KGELSATAVNAPMVPAEVLLELKPFVVLAEKLGRLAVQLVAGGSGVKSVKVTYGSARAPD
DLDTRLLRAMITKGMIEPISSVFINLVNADFTAKQRGLQISEERLILDGSPESPVEFIQV
QIANVESKFASAISDLGEIRVEGRVKDGVPHLTKVGSFEVDVSLEGSIILCSQVDQPGMI
GKVGSVLGEENVNVSFMSVGRVAPRKQAVMAIGVDEQPSKESLKRIGEIPAIQEFVYLGL
*

Transcript Sequence

Transcript ID

Solyc03g112075.1.1
Transcript Infomation

D-3-phosphoglycerate dehydrogenase (AHRD V3.3 *** K4BK61_SOLLC)
Sequence

CCTAATCACATCACTTGTCAGCAACCAGTCACCCATAAAACCCTCTCCAATTCCTTCCAC
TATAACAACTCATTTTCAACCTTTTCCGCCGTCGTCGTCGCCGTTTCACCATACTGAGCT
ACGCTCCGAATAGCTTACCACAATGGCGGCTTCACCTTCTTCAACTATGATTTTATCTTC
AAAATCTTCACGCGCCTCTCTCTCATGGAAAAACCAGCTCGCTTCTACCTCTGCCTTTCG
TGTCTCCGCGGTTACTCTCCCGCGCAGAAGCCCCCGTCAGTGTCCGAGGTTTGTCGTTTT
CTCAATGGACGCCAAACCTACGGTTCTCGTTGCTGAAAAACTAGGCGAGGCTGGGCTGAA
ACTTTTAAAGGAATTCGCGAATGTTGATTGCTCATATAACTTGACTCCTGAGGAGCTGTG
CACTAAGATCTCTCTTTGTGATGCGTTGGTTGTGAGGAGCGGAACAAAGGTGACCCGTGA
GATCTTTGAATCTTCTGGTGGACGGCTGAAGGTTGTTGGACGTGCTGGTGTGGGGATTGA
TAACGTTGATCTTGCGGCGGCAACAGAGCATGGATGCCTTGTTGTTAATGCGCCCACTGC
TAATACAGTTGCAGCTGCCGAGCATGGAATCGCCCTTCTCACAGCTATGGCTCGGAATGT
TGCTCAAGCTGATGCTTCTGTCAAAGCTGGGAAATGGTTGAGGAACAAATATGTTGGTGT
CTCCCTAGTAGGCAAAACACTTGCTGTGATGGGTTTTGGGAAGGTTGGATCAGAAGTCGC
AAGGCGAGCTAAGGGGCTTGGCATGCATGTCATTGCTCATGACCCATACGCCCCTGCTGA
CCGTGCACGTGCTATTGGTGTGCAGCTTGTGAGCTTTGATGAAGCCCTTGCTTCTGCAGA
TTTCATCTCACTTCACATGCCTCTGACCCCTGCTACAAAGCAGATCCTGAATGATGAAAC
TTTTGCGAAGATGAAAAAGGGTGTACGGATTGTGAATGTTGCTCGTGGGGGTGTGATTGA
TGAAGAAGCTTTGGTGAGGGCACTTGATGCAGGCATTGTGGCACAGGCAGCACTTGATGT
TTTCACTGTGGAGCCGCCACCAAAGGATAGCAAGTTGATTCAACATGAGAATGTGACTGC
AACTCCACATCTTGGTGCTAGTACTACAGAGGCTCAGGAAGGTGTGGCAATTGAGGTCGC
TGAAGCAGTTGTTGGCGCTTTGAAAGGGGAACTCTCAGCTACTGCTGTCAATGCACCTAT
GGTTCCTGCTGAGGTGCTATTAGAGCTTAAGCCTTTTGTTGTACTTGCTGAAAAACTTGG
TAGACTTGCTGTCCAGTTGGTTGCCGGTGGAAGTGGTGTTAAATCAGTGAAAGTAACATA
TGGTTCAGCTAGAGCACCTGATGATCTTGATACAAGATTGCTTCGTGCCATGATAACTAA
AGGCATGATTGAGCCAATTTCCAGTGTTTTCATTAACTTAGTTAATGCAGATTTCACTGC
TAAACAAAGGGGACTACAGATATCTGAAGAACGACTTATCCTAGATGGTTCACCAGAAAG
TCCAGTTGAGTTCATTCAGGTTCAGATAGCCAATGTAGAATCCAAGTTTGCCAGTGCTAT
TTCAGACTTGGGAGAGATTAGAGTGGAGGGTAGAGTTAAGGATGGAGTACCTCATTTGAC
AAAGGTGGGTTCTTTTGAAGTGGATGTGAGCTTGGAAGGCAGTATCATTCTTTGCAGTCA
GGTTGATCAGCCAGGAATGATTGGAAAAGTGGGTAGCGTCTTGGGTGAGGAGAATGTGAA
TGTCAGCTTCATGAGCGTTGGAAGAGTTGCTCCTAGAAAGCAAGCTGTTATGGCTATTGG
GGTGGATGAACAACCCAGCAAGGAGTCACTGAAAAGGATTGGGGAAATTCCTGCCATCCA
GGAGTTCGTTTACCTTGGATTATAG