Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g111870.3.1
CDS Infomation

E3 ubiquitin-protein ligase RGLG2 (AHRD V3.3 *** A0A0B0PYM1_GOSAR)
Sequence

ATGGGTGGCAAGAGTTCAAAGAGGTCAACAATTGGCCGATATGCATCATATGGCTCCAGT
TCAAATTCAGGTTATCCAGGCTATGCACAATCACCGTATACTCAACCAACCTATCCACCA
CCACCTTCTTATCAAACATACGGTGGTCCACCTCCTGAATCAAGGAAAAGGCTTGAGAGG
AAATTTTCAAAGATAGATGATGACTACAACAGCTTAGAACAGGTTACTGATGCCCTTGCA
CGTGCTGGTTTAGAGTCATCTAACTTAATTGTTGGCATTGATTTTACCAAGAGCAATGAG
TGGACTGGTGCAAGGTCATTCCACCGCAAAAGTTTGCATCACATTGGAGATGGGCAAAAT
CCATATGAACAAGCAATATCGATCATTGGAAGAACACTGTCGAAATTTGATGAGGACAAC
CTAATTCCTTGTTATGGATTTGGAGATGCCTCAACACATGATCAAGAAGTCTTCAGCTTC
TATCCCGATGAGAAGTTTTGTAATGGATTCGAGGAAGTACTTGGTAGATATAGAGAATTA
GTTCCCCAGTTACGGCTTGCAGGCCCAACATCATTTGCTCCTGTTATTGAAATGGCAATC
ACTATTGTTGAGCAGAGTGGTGGTCAGTACCATGTTTTATTGATAATAGCAGATGGACAG
GTTACAAGAAGTGTAGATACTGTGAATGGCCAATTAAGCCCTCAAGAGAAGAGAACAGTT
GAAGCAATTGTTAAAGCTAGTCAATACCCCTTGTCAATTGTTTTAGTTGGGGTTGGAGAT
GGGCCATGGGACATGATGAGGGAATTTGATGACAACATCCCTGCTCGGGCCTTTGACAAT
TTCCAGTTTGTTAATTTTACAGATATCATGGCAAAGAATATGGCTCTTTCCAGGAAAGAA
GCAGAGTTTGCCTTGTCAGCATTGATGGAGATACCATCTCAGTACAAAGCAACTCTGGAG
CTGAACATTCTGGGTGCTCGTAGAGGGAATGAAATTGACAGGATTGCTCTCCATCCTCCT
CAATATGGTGCAGCTTCTTTCGGCACATCAAAACCTTCACAAAACAGTAGTTACCGTCCA
AGTGCACCTTCTTCTAGTGGACACAATTCAGCTGTTGGAAGTGGACACAATTCTGCTGTT
GGGTCAAGTCATCCAGCAAGTTCTGCAGATAATCAGCTTTGCCCCATCTGCATAACCAAT
CCAAAGGACATGGCATTTGGTTGCGGACATCAGACATGTTGTGAATGTGGTCAAGATCTG
CTGTTGTGCCCCATCTGTCGGGACAGTATTCAAACTAGGATAAAACTTTACTGA

Peptide Sequence

PEP ID

Solyc03g111870.3.1
PEP Infomation

E3 ubiquitin-protein ligase RGLG2 (AHRD V3.3 *** A0A0B0PYM1_GOSAR)
Sequence

MGGKSSKRSTIGRYASYGSSSNSGYPGYAQSPYTQPTYPPPPSYQTYGGPPPESRKRLER
KFSKIDDDYNSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFHRKSLHHIGDGQN
PYEQAISIIGRTLSKFDEDNLIPCYGFGDASTHDQEVFSFYPDEKFCNGFEEVLGRYREL
VPQLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTVNGQLSPQEKRTV
EAIVKASQYPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTDIMAKNMALSRKE
AEFALSALMEIPSQYKATLELNILGARRGNEIDRIALHPPQYGAASFGTSKPSQNSSYRP
SAPSSSGHNSAVGSGHNSAVGSSHPASSADNQLCPICITNPKDMAFGCGHQTCCECGQDL
LLCPICRDSIQTRIKLY*

Transcript Sequence

Transcript ID

Solyc03g111870.3.1
Transcript Infomation

E3 ubiquitin-protein ligase RGLG2 (AHRD V3.3 *** A0A0B0PYM1_GOSAR)
Sequence

ATAACTTATCATTCTTTTCAAAATCGAAGAGATCAAATAAATTTTGATAAATTAAAAGGT
TAAAATATTGAGACGTAGATGGTGTTTTGATATCAAGATTTTTGAAAAAATTGATAAATG
AAAAGGTCAAATAACTGTTGAGGTAGAATTGGTATTTAATGTTGGTAGAATATGATTGAT
TTCACGCGAAATTAATAGAAGTATCTACAAATTTCCTCAAAATTTGACAATTGAAGAAGT
CAAATAGTTGGTGTTGTAGTGTTTATTGCATAAAGTTTATGAATTCTTCCAAAAGAAATA
AATGGCCATGTTTACACGTTGCAATATGAAATTGAGATATTTGTAGAGTTATTTCCTTTA
TGTAATTGAGTAGCATTACACACTATACTACAATTAGTCAGTTCTGGAGAATAAAATGTA
CACATAAACTTTACATTTATAAAAGAATATCAGATAACCAATTTAACATTACTAAGCTTC
CGATCAAATAGATAGTCAATTTTAATTGGAATATATAAATAGAGCAAACTCCCGTGATGT
GTTGGAATTTGGCCACAATAAGAGAACTTTCACAGAAATAAACAATCAAGAAACGTACGC
TACAGAACAAGAGAAAAACAATCGGTTGGTCCACTTCCTAAAGCATAAACAAGAAAAAAG
CTTCATTGTCACAACCTACTTTCTTTCTGCTCTATCCTTTCTCCACTACCCCACTCCTGA
ATCGGGCACACAGAAACTGAGAGAATCTCAAGTAATGCAGCAAAACCTGGGCGGCGCTTG
AAAAGATTTCATGGGTGGCAAGAGTTCAAAGAGGTCAACAATTGGCCGATATGCATCATA
TGGCTCCAGTTCAAATTCAGGTTATCCAGGCTATGCACAATCACCGTATACTCAACCAAC
CTATCCACCACCACCTTCTTATCAAACATACGGTGGTCCACCTCCTGAATCAAGGAAAAG
GCTTGAGAGGAAATTTTCAAAGATAGATGATGACTACAACAGCTTAGAACAGGTTACTGA
TGCCCTTGCACGTGCTGGTTTAGAGTCATCTAACTTAATTGTTGGCATTGATTTTACCAA
GAGCAATGAGTGGACTGGTGCAAGGTCATTCCACCGCAAAAGTTTGCATCACATTGGAGA
TGGGCAAAATCCATATGAACAAGCAATATCGATCATTGGAAGAACACTGTCGAAATTTGA
TGAGGACAACCTAATTCCTTGTTATGGATTTGGAGATGCCTCAACACATGATCAAGAAGT
CTTCAGCTTCTATCCCGATGAGAAGTTTTGTAATGGATTCGAGGAAGTACTTGGTAGATA
TAGAGAATTAGTTCCCCAGTTACGGCTTGCAGGCCCAACATCATTTGCTCCTGTTATTGA
AATGGCAATCACTATTGTTGAGCAGAGTGGTGGTCAGTACCATGTTTTATTGATAATAGC
AGATGGACAGGTTACAAGAAGTGTAGATACTGTGAATGGCCAATTAAGCCCTCAAGAGAA
GAGAACAGTTGAAGCAATTGTTAAAGCTAGTCAATACCCCTTGTCAATTGTTTTAGTTGG
GGTTGGAGATGGGCCATGGGACATGATGAGGGAATTTGATGACAACATCCCTGCTCGGGC
CTTTGACAATTTCCAGTTTGTTAATTTTACAGATATCATGGCAAAGAATATGGCTCTTTC
CAGGAAAGAAGCAGAGTTTGCCTTGTCAGCATTGATGGAGATACCATCTCAGTACAAAGC
AACTCTGGAGCTGAACATTCTGGGTGCTCGTAGAGGGAATGAAATTGACAGGATTGCTCT
CCATCCTCCTCAATATGGTGCAGCTTCTTTCGGCACATCAAAACCTTCACAAAACAGTAG
TTACCGTCCAAGTGCACCTTCTTCTAGTGGACACAATTCAGCTGTTGGAAGTGGACACAA
TTCTGCTGTTGGGTCAAGTCATCCAGCAAGTTCTGCAGATAATCAGCTTTGCCCCATCTG
CATAACCAATCCAAAGGACATGGCATTTGGTTGCGGACATCAGACATGTTGTGAATGTGG
TCAAGATCTGCTGTTGTGCCCCATCTGTCGGGACAGTATTCAAACTAGGATAAAACTTTA
CTGAGTGACTTCTCTTGGCGGATGAATAATTTGCTGCTAGTTAAGAAAGCCTCTGATTCT
CATATTACTAAGGAGGGGTTACATTCTGATGGCGCTAACAATGTCAGCCATATCAAACAT
CTATTAATTTAGAGATGCTACATTTCAGTATTTTGCTCTGTACATATATTTTTTTCAAGG
TAACTCATTGTTCGTTGAATCTGGTGCTCTTTGTGCAAGTAAATTTCTACTTTCCAGCTG
TGTTCATCAACAAACTCTTAATATGTATAGTATCACAAAAATGGAGAAGAAACGGGACAA
TGTCCAAGAAGATTTATTCTCTTATCGAAGTGCTTCTAAATTTAGAAGAATTAGAGTGAT
GCTTCAACAAATACAGTTGTCTACATTCATCAAGTTTCTGAGGTCATCTTGGAGGTCACA
ATTTTTAATTGAGTTGCAACCTTTCGGGCTGAATGGCTGAGTCTTTTAGTGTGTAAAAAG
AATGTTTGGAATCATTGTCACACAAAAGGTTCATGTGGAAAGAACTCTACCTAACCATTT
ATTAGTTAGACCAAAAAATGACCAAAGATTAATTGAAAAATTGATTGCTCATTTGCATGA
CTTCCTCTATAAGTCCCTTATATATCCTTTCAAACCAGAAGATTATTCGATGAAAAAATC
TCCTGCACTTCTTTTTCTGTTCTCATGGAGAAGCTCTGGCAGACAAGAATCAACTGCATC
ATCATCAGTGCAGCTCTTTTACTGCACTGTCTTATTTCATGCAGAGCAAAAACTGTGTTG
CACCATTCTGCAGAAAGAAAAGGGACATGGAAGCTACTGCTGAACAACACTGGAGTTGTG
GGTGTGCAGATGGTTTTAACCCATTGGAACACCGTGATACTGCTTGATCGGAGCGGATCT
GGTCGATCAGGATACCAACTACGTCATCGGTTAAATGGAACAAGATGCAAGGGCAGTCGT
GACGATTTGTCAGACCCAACTTGCTATGTTCATTCTGTTGAGTATAGCATTTCTAACAAC
ACTATTAGGCGCTTGAACATCATGTCTGACACTTTTTCGTCTTCTGGTTCCATCTTGAGT
GATGGAAGGATCATTGAATCAGGTGGCTTTGGAGATGCTTCGACAAGGATTCACTACATT
GGGCCTTGTAGAAGTGGTGATAACTGTGACTGGAGCCTGGGGAAGAAACACTTATCTGTA
AAACGTTGGTATGCTTCTAGCCAAATCCTCCCAGATGACAGGATCATCGTTGTTGGAGGA
CGAGGGTCCTTCACGTATGAGTTTATACCGAAAATGTCAACCAATGGAAATGTTTTCCAT
CTTAGTTTCTTGCAGCAAACTAGCGATGGAAACAATCTTTATCCTATTGTTCACCTTTCT
GTTGATGGCAAATTGTTCATTTTTGCCAACAGGGATTCCATTCTTTTCAACTACAAGCAA
AACAGGGTTGTAAAGAAATTCCCAAGAATCCCCGGAATAGGGTCAAGGAGTTATCCGAGC
ACAGGATCATCTGTTATTCTTCCACTGGATCAAAAAGATGGCTTCCGTAAAGTGGAGGTC
ATGATATGTGGAGGGGCAGCTTCAGGGGCGAATGCAGCTGCTAAACAGGGCACATTCTTG
ACAGGTCTAAACAGTTGCGGGAGAATGGTGATCACTGGAAATAACCATAAATGGAAGATG
GAAAACATGCCAGGGCCACGCCTTATGAACGATATGGTGCTTCTTCCAACAGGACACGTG
CTAATCATAAATGGCGCGAAGAGGGGTTGTGCTGGATGGAGAAATGCTGCTGGCCCTGCT
CTTGAACCTTACCTATACAACCCCAAGAAAACTCTTGGCAGAAGGTTCACTATTCTTAAA
TCCACTAAAATCGCGAGAATGTTTCATTCATCAGCAATTCTTGTACCTGATGGAAGTGTA
CTAGTAGCAGGAAGCAATCCAAATAACCAATACACTTACAGAAATGTAAGTCACCCTACT
GAACTCCGGCTACAGGCATTCATCCCGGACTATATGGGCAAGGAATACAATCATCAAAGG
CCTCATAACGTGTCGATTGACATCAATGGCACGGAAGGAGTTGCATATGGTAACGAATTT
TTGGTTCGTTTTTTGCTAGAGAGTAAACCTAGTAAATATCTGGCTTTTAGTGCATATGCT
CCGCCGTTTACGACACATTCCCTGTCGATGAATCAAAGGTTGTTGAGACTCAGGAGCACA
CGGATAATAAGTGATGCAAAAGGTTGGTGGAATGCTACTGTTGAAGCTCCGCCATCAGCT
AATGTAGCACCAAGTGGATTTTATTTGCTTAGTGTTGTTAATGAGGGAATTCCCAGCATT
GCTGAGTGGATTAAGTTCATTCAACCTGCTTCAACTTGAATTAATTATCTTGTATAACTT
TGCTAATGGTCCAAGTATTGAACTTTGACATTTTATTGGCTCTACTTGAACCACTATGTT
TCAATCAAATTTGAGAATTATAACAAACTTGTTTGGATCATGATTCAACTACTTTAGTCC
AAACATTGAGAAAAAAAGAGAGGTTATGATTCAACTACCATAGCCCAAACTAAAAAGAAA
AAAAAAAGAAGACAAAGAATACACCTAATTGGGTGTCTTAGATAGTACACAATGTCAAAA
TTTCTTTAATGTCATACAATAAAGTATTTGTAGGATCATTTTTTCCTCAAATCATAAGGA
GTTCTAAAATTTTAGTCAATTGAGTATTTGAATTTTTACTTTATCGTGATA