Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g111850.3.1
CDS Infomation

Indole-3-glycerol phosphate synthase (AHRD V3.3 *** W8SVJ4_TOBAC)
Sequence

ATGGATTCTGTAATGCCGTTGAGAACCACCACCGCCGCCACGGCAACGGCGGCCTCTGCA
GCGGCGACGGTAAGACCCCGGTTCTCATTTCAACTCCTTGCCAATCCCAGACCTAGGAAA
CCGGCATTCTCCTTGTCAGTTCCAACGACTATTTTCACGACACACCGAGCTCGAATTTTG
CCCCAATTTACACCAGTTCGAGCTCAAGAGGATAATTCAGCTTTGGTTTCTGAATCCACC
ATTCCTGAAGGAGATGCTCTCAAAATCAAGGAGTGGGAAGTAGAAAGATTCCAAGATGAA
ATTGCTGCAAGTCAGGGTATAAAAATTAGAAGGAGGCCGACAACAGGACCTCCTTTGCAC
TATGTTGGTCCTTTTGAATTTCGCATGCAGAATGAAGGCAATACTCCTATTAACATTCTA
GAAGAAATTATCTGGTACAAGGACAAGGAAGTCTCACAGATGAAAGAGAAGAAACCGCTT
CTTCTACTGAAAAAACTGCTTAGCAGTGTTCCACCTACCAGGGATTTTCTAGGAGCTCTG
AGAGAATCATATTCAAGAACTGGATTGCCTGCTCTTATTGCTGAAGTGAAGAAGGCTTCT
CCAAGTAGAGGTGTTCTGCGCGAAAATTTTAATCCAGTTGAGATCGCCAAAGCTTATGAA
AGAGGTGGAGCAGCATGCCTTAGTGTTTTGACAGATCAGAAATATTTTCAGGGAAGCTTT
GAAAATCTAGAGGCCATAAGGAATGCTGGAGTAGAGTGCCCTTTGTTATGTAAAGAATTT
GTTATAGAGGCTTGGCAAATCTACTATGCTCGGGTCAAAGGTGCTGATGCGATTCTGTTA
ATTGCTGCTGTCCTACCAAACCTTGACATCCAGTATATGATTAAGATCTGCAAATTACTT
GGATTGACAGCACTAGTTGAGGTGCATGATGAGAGGGAAATGGACCGTGTCCTCGGAATT
GACGGGGTTGAGCTGATTGGCATCAATAATAGAGACCTTGGAACTTTCAAGGTGGACATC
AGCAATACCAAGAAACTTCTGGAAGGAGAGCGTGGGGAAAGAATTCGGGAGAAGGGCATT
ATTGTTGTTGGGGAATCTGGACTATTTACTCCAGCTGATATTGGTTATGTACAAGAAGCT
GGTGTCAAAGCGGTGCTAGTTGGTGAGTCGCTTGTCAAACAGGAGGATCCTGCTAAAGGA
ATAAGTGGACTTTTTGGTAAAGACATCTCCTGCTAA

Peptide Sequence

PEP ID

Solyc03g111850.3.1
PEP Infomation

Indole-3-glycerol phosphate synthase (AHRD V3.3 *** W8SVJ4_TOBAC)
Sequence

MDSVMPLRTTTAATATAASAAATVRPRFSFQLLANPRPRKPAFSLSVPTTIFTTHRARIL
PQFTPVRAQEDNSALVSESTIPEGDALKIKEWEVERFQDEIAASQGIKIRRRPTTGPPLH
YVGPFEFRMQNEGNTPINILEEIIWYKDKEVSQMKEKKPLLLLKKLLSSVPPTRDFLGAL
RESYSRTGLPALIAEVKKASPSRGVLRENFNPVEIAKAYERGGAACLSVLTDQKYFQGSF
ENLEAIRNAGVECPLLCKEFVIEAWQIYYARVKGADAILLIAAVLPNLDIQYMIKICKLL
GLTALVEVHDEREMDRVLGIDGVELIGINNRDLGTFKVDISNTKKLLEGERGERIREKGI
IVVGESGLFTPADIGYVQEAGVKAVLVGESLVKQEDPAKGISGLFGKDISC*

Transcript Sequence

Transcript ID

Solyc03g111850.3.1
Transcript Infomation

Indole-3-glycerol phosphate synthase (AHRD V3.3 *** W8SVJ4_TOBAC)
Sequence

CTTAAATATTTATCGAATTAAATAATATCACGTAATATACTACATAACAAAATAGTGTCA
CATAAAATATGACGACAGAAAATAATAAAAAAGCTTGAGTGATACCATTGACGTGATGCG
TCGCGGGGGGTTGGCGGCTACGGTAAATCCCCAAAAGATCTAAATCTAATTTTGCAGAGA
TATTCTATAGTTCTTCGGTGGTTCAACATAGCCCCTTAAGAACAGCCATTTACTTCCCCA
TTTTTTCTTTTTCTAATTGAATAATGGATTCTGTAATGCCGTTGAGAACCACCACCGCCG
CCACGGCAACGGCGGCCTCTGCAGCGGCGACGGTAAGACCCCGGTTCTCATTTCAACTCC
TTGCCAATCCCAGACCTAGGAAACCGGCATTCTCCTTGTCAGTTCCAACGACTATTTTCA
CGACACACCGAGCTCGAATTTTGCCCCAATTTACACCAGTTCGAGCTCAAGAGGATAATT
CAGCTTTGGTTTCTGAATCCACCATTCCTGAAGGAGATGCTCTCAAAATCAAGGAGTGGG
AAGTAGAAAGATTCCAAGATGAAATTGCTGCAAGTCAGGGTATAAAAATTAGAAGGAGGC
CGACAACAGGACCTCCTTTGCACTATGTTGGTCCTTTTGAATTTCGCATGCAGAATGAAG
GCAATACTCCTATTAACATTCTAGAAGAAATTATCTGGTACAAGGACAAGGAAGTCTCAC
AGATGAAAGAGAAGAAACCGCTTCTTCTACTGAAAAAACTGCTTAGCAGTGTTCCACCTA
CCAGGGATTTTCTAGGAGCTCTGAGAGAATCATATTCAAGAACTGGATTGCCTGCTCTTA
TTGCTGAAGTGAAGAAGGCTTCTCCAAGTAGAGGTGTTCTGCGCGAAAATTTTAATCCAG
TTGAGATCGCCAAAGCTTATGAAAGAGGTGGAGCAGCATGCCTTAGTGTTTTGACAGATC
AGAAATATTTTCAGGGAAGCTTTGAAAATCTAGAGGCCATAAGGAATGCTGGAGTAGAGT
GCCCTTTGTTATGTAAAGAATTTGTTATAGAGGCTTGGCAAATCTACTATGCTCGGGTCA
AAGGTGCTGATGCGATTCTGTTAATTGCTGCTGTCCTACCAAACCTTGACATCCAGTATA
TGATTAAGATCTGCAAATTACTTGGATTGACAGCACTAGTTGAGGTGCATGATGAGAGGG
AAATGGACCGTGTCCTCGGAATTGACGGGGTTGAGCTGATTGGCATCAATAATAGAGACC
TTGGAACTTTCAAGGTGGACATCAGCAATACCAAGAAACTTCTGGAAGGAGAGCGTGGGG
AAAGAATTCGGGAGAAGGGCATTATTGTTGTTGGGGAATCTGGACTATTTACTCCAGCTG
ATATTGGTTATGTACAAGAAGCTGGTGTCAAAGCGGTGCTAGTTGGTGAGTCGCTTGTCA
AACAGGAGGATCCTGCTAAAGGAATAAGTGGACTTTTTGGTAAAGACATCTCCTGCTAA