Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g111390.3.1
CDS Infomation

Kelch repeat protein, putative (AHRD V3.3 *** B9RAN1_RICCO)
Sequence

ATGGGAAAGAAAACAAAGAAACCAGGCAAAGGTAAAGAGAAAACAGAGAAGAAAACAGCT
AAAGCAGAAGAGAAAAGAGCCCGTAGAGAATCAAAGAAGCTCTCCCCTGAAGACGACATC
GATGCTATACTGCTGAACATACAAAAAGAGGAAGCTAAGAAGAAGGAAATTCATGTTGAA
GAGAATGTCCCTGCACCTTCTCCTCGATCCAATTGTTCGTTGAGCATTAACCCGTTGAAG
GAGACCGAATTAGTTCTCTATGGTGGTGAATTTTACAATGGCAGCAAGACATTTGTATAT
GGCGATCTCTACCGGTATGACGTGGAAAAGCAAGAGTGGAAGTTGATTTCAAGCCCCAAC
AGTCCGCCTCCTCGCAGTGCACACCAAGCAGTTGCTTGGAAAAATTATCTTTATATTTTT
GGTGGTGAATTTACATCTCCTAATCAGGAGCGATTCCACCATTACAAGGATTTTTGGGCA
TTGGACTTGAAAACAAACCAATGGGAGCAGCTAAATTATAAAGGGTGTCCTAGTCCACGT
TCAGGTCATCGCATGATTTTGTACAAGCACAAGATCATAGTTTTTGGAGGCTTCTATGAC
ACTCTTCGGGAAGTCAGGTATTACAATGACCTTCATGTATTTGATCTTGATCAGTATAAG
TGGCAAGAAATAAAACCTACACCTGGATGCATGTGGCCAAGTGCTCGAAGTGGCTTCCAG
TTTTTTGTCTATCAAGATGAGATATATCTGTATGGTGGTTATTCCAAAGAAGTATCATCT
GATAAAAGTGGCTCAGAGAAGGGAAATGTTCACTCAGACATGTGGTCTCTTGATCCTAAG
ACATGGGAATGGAACAAGGTTAAAAAAAGTGGCATGCCTCCCGGTGCTCGTGCTGGCTTC
TCTATGTGCATTCATAAAAAGCGGGCTATACTATTTGGAGGTGTCGTGGATATGGAAATG
GAAGGTGATGTTATGATGAGCTTGTTTCTGAATGAACTTTATGGCTTCCAATTAGACACT
CATCGCTGGTATCCATTGGAGCTGCGGAAGGAGAAATCTATAAAACCTAAGCAAAAGCAA
GTTTTAGATGAGCAAGTTGACAGCATGGATCTTGATAGTAAGATAAGTCCAATGGAAGTT
GATGCAGACGATGAAGATGAGGACCTCGATTACGAAGAAGATACCAGCACAAAAAGCAAT
ATCAAAAAAATGTCTTTGAACATGAAAAGGAATGTGACTATTGATGATGGCTATGAAGCT
TCTAGATCTGAGGCTAGCTCTAAATCTTCAGCCGTGCAACATTCAGCTTCAGCGGATGTA
GTGAAGCCCTGTGGACGTATAAATTCATGCATGGCTGTGGCTAAAGATACCTTATATATC
TATGGTGGGATGATGGAAATTAGAGACCAAGAACTTACTCTTGATGACTTATATGTTCTT
AATCTCAGTAAACTGGATGAATGGAAATGCATTATCCTGGCATCTGAGTCTGAGTGGGTT
GAAGCATCAGATAATGAAGATGATGAGGATGAAGATGAAGATGACAGTGATAATGAATAA

Peptide Sequence

PEP ID

Solyc03g111390.3.1
PEP Infomation

Kelch repeat protein, putative (AHRD V3.3 *** B9RAN1_RICCO)
Sequence

MGKKTKKPGKGKEKTEKKTAKAEEKRARRESKKLSPEDDIDAILLNIQKEEAKKKEIHVE
ENVPAPSPRSNCSLSINPLKETELVLYGGEFYNGSKTFVYGDLYRYDVEKQEWKLISSPN
SPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWALDLKTNQWEQLNYKGCPSPR
SGHRMILYKHKIIVFGGFYDTLREVRYYNDLHVFDLDQYKWQEIKPTPGCMWPSARSGFQ
FFVYQDEIYLYGGYSKEVSSDKSGSEKGNVHSDMWSLDPKTWEWNKVKKSGMPPGARAGF
SMCIHKKRAILFGGVVDMEMEGDVMMSLFLNELYGFQLDTHRWYPLELRKEKSIKPKQKQ
VLDEQVDSMDLDSKISPMEVDADDEDEDLDYEEDTSTKSNIKKMSLNMKRNVTIDDGYEA
SRSEASSKSSAVQHSASADVVKPCGRINSCMAVAKDTLYIYGGMMEIRDQELTLDDLYVL
NLSKLDEWKCIILASESEWVEASDNEDDEDEDEDDSDNE*

Transcript Sequence

Transcript ID

Solyc03g111390.3.1
Transcript Infomation

Kelch repeat protein, putative (AHRD V3.3 *** B9RAN1_RICCO)
Sequence

TTCGACAAAGGTTGCGAAGAGCTAGCCGCCGGAGCAGAGAGCAGCAGCCGGAGATAGTGA
AAAAATGGGAAAGAAAACAAAGAAACCAGGCAAAGGTAAAGAGAAAACAGAGAAGAAAAC
AGCTAAAGCAGAAGAGAAAAGAGCCCGTAGAGAATCAAAGAAGCTCTCCCCTGAAGACGA
CATCGATGCTATACTGCTGAACATACAAAAAGAGGAAGCTAAGAAGAAGGAAATTCATGT
TGAAGAGAATGTCCCTGCACCTTCTCCTCGATCCAATTGTTCGTTGAGCATTAACCCGTT
GAAGGAGACCGAATTAGTTCTCTATGGTGGTGAATTTTACAATGGCAGCAAGACATTTGT
ATATGGCGATCTCTACCGGTATGACGTGGAAAAGCAAGAGTGGAAGTTGATTTCAAGCCC
CAACAGTCCGCCTCCTCGCAGTGCACACCAAGCAGTTGCTTGGAAAAATTATCTTTATAT
TTTTGGTGGTGAATTTACATCTCCTAATCAGGAGCGATTCCACCATTACAAGGATTTTTG
GGCATTGGACTTGAAAACAAACCAATGGGAGCAGCTAAATTATAAAGGGTGTCCTAGTCC
ACGTTCAGGTCATCGCATGATTTTGTACAAGCACAAGATCATAGTTTTTGGAGGCTTCTA
TGACACTCTTCGGGAAGTCAGGTATTACAATGACCTTCATGTATTTGATCTTGATCAGTA
TAAGTGGCAAGAAATAAAACCTACACCTGGATGCATGTGGCCAAGTGCTCGAAGTGGCTT
CCAGTTTTTTGTCTATCAAGATGAGATATATCTGTATGGTGGTTATTCCAAAGAAGTATC
ATCTGATAAAAGTGGCTCAGAGAAGGGAAATGTTCACTCAGACATGTGGTCTCTTGATCC
TAAGACATGGGAATGGAACAAGGTTAAAAAAAGTGGCATGCCTCCCGGTGCTCGTGCTGG
CTTCTCTATGTGCATTCATAAAAAGCGGGCTATACTATTTGGAGGTGTCGTGGATATGGA
AATGGAAGGTGATGTTATGATGAGCTTGTTTCTGAATGAACTTTATGGCTTCCAATTAGA
CACTCATCGCTGGTATCCATTGGAGCTGCGGAAGGAGAAATCTATAAAACCTAAGCAAAA
GCAAGTTTTAGATGAGCAAGTTGACAGCATGGATCTTGATAGTAAGATAAGTCCAATGGA
AGTTGATGCAGACGATGAAGATGAGGACCTCGATTACGAAGAAGATACCAGCACAAAAAG
CAATATCAAAAAAATGTCTTTGAACATGAAAAGGAATGTGACTATTGATGATGGCTATGA
AGCTTCTAGATCTGAGGCTAGCTCTAAATCTTCAGCCGTGCAACATTCAGCTTCAGCGGA
TGTAGTGAAGCCCTGTGGACGTATAAATTCATGCATGGCTGTGGCTAAAGATACCTTATA
TATCTATGGTGGGATGATGGAAATTAGAGACCAAGAACTTACTCTTGATGACTTATATGT
TCTTAATCTCAGTAAACTGGATGAATGGAAATGCATTATCCTGGCATCTGAGTCTGAGTG
GGTTGAAGCATCAGATAATGAAGATGATGAGGATGAAGATGAAGATGACAGTGATAATGA
ATAATGTGTGTAATATCATCTATTTAAAGGCTAATAATGGTGCATCAACATCACTTGAAA
CTGGAGATGCTGTTGCCATGATCAGAGGTGAAGGGAAAACACTGAGAAGGAAGGAGAAAC
GAGCCAGAATTGAGCAAATCAGAGCCAGTCTTGGTCTCTCTGATGCTCAAAGAACACCAG
TGCCGGGGGAGTCTCTGAAGGATTTCTATAAAAGAACAAATATGTACTGGCAAATGGCAG
CATATGAACACACACAGCATACGGGAAAGGAGCTGCGTAAGGATGGTTTTGATCTTGCTG
AATGTCGATACAAAGAGCTCAAACCTATCCTTGATGAGTTGGCCATTCTAGAGGCAGAGC
AGAAGGCGGAAGAGGCAGAGGGACCTGAAAAGAGTAGTGCAAAGAAGAGAGGGAACAAGA
AAACCAAAAATGTAGCATTCAAGTAATCAGGACCTTAATTATGCCTCATCTCCTAATCCA
GGTAAACGCATTGAAATGGCGATGTCCAAAACAGGGTTGTAGGAAATGTTTTCTTCTTCT
GTTTGCCAAAAAGATGTGAGAGTCAATGTGTATTAAGTCAAGTAGACCAACTTCGGCTTG
TCTAGTGATTGTTATATATATTTTCGCCTCTGGCAGTTTTTGATATGGCTAGCAAGTTGC
TTGCATACGAATATGATAAAATGTTTTGTAGTCTCAGCATGGATAAATATTCAACAAAGC
TTTTTGGAGTGCCCTGTTTCACAAAAACATGAATACAATGTAAGAGTTCGTTTGTTGCAT
GAATTGACGAAGAAGTATATGTTCTTCTGAAATATGGAGAATATCGAGTATATAAGTAGT
GGTTTTAAATCTAGAGGTTAATCGTCAATTTTC