Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g111250.3.1
CDS Infomation

SWI/SNF complex component SNF12-like protein (AHRD V3.3 *** W9RMR8_9ROSA)
Sequence

ATGAATAACAATAATCCAGTTAAGAATGTTAGTTTAGGAACCTCAGTTCCAATTCAAATT
CCTCAATCTATGCCGATAAACCATAATCAACCAGCTGTTCGTCACTTCTCCCAGTCACCA
GCACAACGGGGTTCACATTTCCCTGGCCATTTTCAGTTATCTGAATCACGATCTCATGCC
CCATTTCAAGGTCAAGCTCAGGCCTTCAGCCATTTCATCACTTCAGGGGTTAATACCAAT
GCTGGTGTTTTATCCCCTGCTGCTTCTACACCCAATACAGCTTCTGGGGGTGCTAGAAAA
GTGCTCCATAGACCACCTTCTCGGACCGGTGGTTCATCTAACCATGGTCAAGCAACTGCT
TCTCCTTTAAAGACAATGGAATTAACCCCTGCTGTGCGTAGGAAAAAGCAAAAAGTTTCT
GACAGGTTTATACCGGATAAGGTGGCTGCGAGTTTGCCCGAGTCAGCACTTTACTCTCAG
TTGCTTGAATTCGAGGGTCGTGTAGATGCTCTTCTTTCTAGAAAGAAGATTGACATGTTG
GAATCCCTTAAGAGTCCTCCGCGTTTCCAGAGAACTCTCAGAATTTATGTATTCAATACT
TTTGCGAATCAGACACCAGCTAATCCGGACAGCGATTCGGCTGAGCCAGCTTCATGGTCT
CTTAAGATTATCGGAAGGATCTTGGGGGGTGGGTCGGGTTCTCAAGCATCTGAAAGGGAG
CAGAAATTGGGTGTTGCTTGCCCCAAGTTCTCATCTTTCTTCAAGAAAGTTACTGTTTAC
TTGGATCAAAGTCTATATCCTGAAAACCATGTAATTTTGTGGGATAGTTCTCGATCACCA
GCTCTTCACGAGGGTTTTGAGATTAAGAGGAAAGGGGATAAGGAGCTTACTGCAATCATC
AGACTGGAGATGAATTATATGCCTGAGAAATTTAAACTATCCCCGGCATTGCAAGAAGTT
CTTGGCATTGAGGTTGAGACACGAGCTAAAGTTTTAGCTGCTCTTTGGTACTACATAAAA
ACTAAGAAGCTACAGATATGCCATGACACCTCCTCGTTCACTTGTGATCCTCCTCTAAGG
AAGATTTTTGGAGAAGAAAAGTTGAAATTTTCCCTGGTTTCCCAAAAGATTCATCCGCAT
CTGACTGCCCCTCAACCTATTCACCTGGAGCACAGGATTAAGCTATCTGGAAGTAGCCCA
GCTGGGAACACTTGTTATGATGTACTGGTTGATGTTCCCTTCACATTGCAGAAGGAATTC
TCCACATTCTTATCTGATTTAGATAAGAACAAGGAGATTGATGCATACGATGAAGCTATT
TCCACCGCTCTAAAGCAAATCCATGAACATCAGAGAAGGCGAGCTTTCTTCCTGGGATTT
AGTCAGTCACCTACCGATTTTGTTAATGCATTAGTTGCATCTCAAGCCAGGGATCTTAAG
CTTGTTTCTGATGATTCGACCCGTGATTCAGAAATGGAGAGGCGTTCTGAATTCTACAAT
CAGTCTTGGACTGAAGACGCTGTTGTGCGCTACTTGAATCGCAATCATGCTTCTGGTGCT
GACCATTCTGCTAGAAAATAG

Peptide Sequence

PEP ID

Solyc03g111250.3.1
PEP Infomation

SWI/SNF complex component SNF12-like protein (AHRD V3.3 *** W9RMR8_9ROSA)
Sequence

MNNNNPVKNVSLGTSVPIQIPQSMPINHNQPAVRHFSQSPAQRGSHFPGHFQLSESRSHA
PFQGQAQAFSHFITSGVNTNAGVLSPAASTPNTASGGARKVLHRPPSRTGGSSNHGQATA
SPLKTMELTPAVRRKKQKVSDRFIPDKVAASLPESALYSQLLEFEGRVDALLSRKKIDML
ESLKSPPRFQRTLRIYVFNTFANQTPANPDSDSAEPASWSLKIIGRILGGGSGSQASERE
QKLGVACPKFSSFFKKVTVYLDQSLYPENHVILWDSSRSPALHEGFEIKRKGDKELTAII
RLEMNYMPEKFKLSPALQEVLGIEVETRAKVLAALWYYIKTKKLQICHDTSSFTCDPPLR
KIFGEEKLKFSLVSQKIHPHLTAPQPIHLEHRIKLSGSSPAGNTCYDVLVDVPFTLQKEF
STFLSDLDKNKEIDAYDEAISTALKQIHEHQRRRAFFLGFSQSPTDFVNALVASQARDLK
LVSDDSTRDSEMERRSEFYNQSWTEDAVVRYLNRNHASGADHSARK*

Transcript Sequence

Transcript ID

Solyc03g111250.3.1
Transcript Infomation

SWI/SNF complex component SNF12-like protein (AHRD V3.3 *** W9RMR8_9ROSA)
Sequence

TGAGAAAATTATATATATGTCAATAACTAGGAAGTGTATTATACAAACTTTGGGCCGTGT
TGTGGGCGAAAAAGTGAGTTTATTTAGCTGCTCTTGCAGAACTTGGGCCAAGTTCATTGA
ACTGCCACCGGTTACAGCTCTCCCTCCGCCGCGAACTTGCTGCATCCGTCTGTTTCTCCG
GCGAACTCCTCCCGGTCTCTTATTTTTCCGGCATAGTTCTATTTCAGGTTCTTCTCTTCC
TCCTTTTTGTGTAATTGTTATGAAGACCTCTCTCGAAAAGGAACCCTAATTTTGCTAGGA
TCACGCGTTCTGGTTTGCAGCTTTGTTAAGTAGAAATTCGTTATGAATAACAATAATCCA
GTTAAGAATGTTAGTTTAGGAACCTCAGTTCCAATTCAAATTCCTCAATCTATGCCGATA
AACCATAATCAACCAGCTGTTCGTCACTTCTCCCAGTCACCAGCACAACGGGGTTCACAT
TTCCCTGGCCATTTTCAGTTATCTGAATCACGATCTCATGCCCCATTTCAAGGTCAAGCT
CAGGCCTTCAGCCATTTCATCACTTCAGGGGTTAATACCAATGCTGGTGTTTTATCCCCT
GCTGCTTCTACACCCAATACAGCTTCTGGGGGTGCTAGAAAAGTGCTCCATAGACCACCT
TCTCGGACCGGTGGTTCATCTAACCATGGTCAAGCAACTGCTTCTCCTTTAAAGACAATG
GAATTAACCCCTGCTGTGCGTAGGAAAAAGCAAAAAGTTTCTGACAGGTTTATACCGGAT
AAGGTGGCTGCGAGTTTGCCCGAGTCAGCACTTTACTCTCAGTTGCTTGAATTCGAGGGT
CGTGTAGATGCTCTTCTTTCTAGAAAGAAGATTGACATGTTGGAATCCCTTAAGAGTCCT
CCGCGTTTCCAGAGAACTCTCAGAATTTATGTATTCAATACTTTTGCGAATCAGACACCA
GCTAATCCGGACAGCGATTCGGCTGAGCCAGCTTCATGGTCTCTTAAGATTATCGGAAGG
ATCTTGGGGGGTGGGTCGGGTTCTCAAGCATCTGAAAGGGAGCAGAAATTGGGTGTTGCT
TGCCCCAAGTTCTCATCTTTCTTCAAGAAAGTTACTGTTTACTTGGATCAAAGTCTATAT
CCTGAAAACCATGTAATTTTGTGGGATAGTTCTCGATCACCAGCTCTTCACGAGGGTTTT
GAGATTAAGAGGAAAGGGGATAAGGAGCTTACTGCAATCATCAGACTGGAGATGAATTAT
ATGCCTGAGAAATTTAAACTATCCCCGGCATTGCAAGAAGTTCTTGGCATTGAGGTTGAG
ACACGAGCTAAAGTTTTAGCTGCTCTTTGGTACTACATAAAAACTAAGAAGCTACAGATA
TGCCATGACACCTCCTCGTTCACTTGTGATCCTCCTCTAAGGAAGATTTTTGGAGAAGAA
AAGTTGAAATTTTCCCTGGTTTCCCAAAAGATTCATCCGCATCTGACTGCCCCTCAACCT
ATTCACCTGGAGCACAGGATTAAGCTATCTGGAAGTAGCCCAGCTGGGAACACTTGTTAT
GATGTACTGGTTGATGTTCCCTTCACATTGCAGAAGGAATTCTCCACATTCTTATCTGAT
TTAGATAAGAACAAGGAGATTGATGCATACGATGAAGCTATTTCCACCGCTCTAAAGCAA
ATCCATGAACATCAGAGAAGGCGAGCTTTCTTCCTGGGATTTAGTCAGTCACCTACCGAT
TTTGTTAATGCATTAGTTGCATCTCAAGCCAGGGATCTTAAGCTTGTTTCTGATGATTCG
ACCCGTGATTCAGAAATGGAGAGGCGTTCTGAATTCTACAATCAGTCTTGGACTGAAGAC
GCTGTTGTGCGCTACTTGAATCGCAATCATGCTTCTGGTGCTGACCATTCTGCTAGAAAA
TAGGACTTGTCGGGCCATTTTTCGGACAAAGGATGTCCGACATAAACTAGGGTATCTTAT
GTAGAAGCATTCTAATAATCTACTTCTGCTGATAGGGAAAGAGCTTATTATATTGTATTT
AAGCAGGAATGTTTGGGATTTGTCAATTGCACCCTAAGAAAAGGATAAAGAGGAATGAAC
TTTTGCGATGCCAATGGTTACTTCTTCTCTTCTTTTTCGAAACTGGTAAAATTCCTACTA
GTCGTTGTAATTATGTTGGAAATGGCCCCAAATGCTTTGGTTGTTAATGGCTGGAGTTGA
ATTCACAGCTACTCAGCATTTTCTAGTTAGCCAATATTGACTTTATGGTGATTTAGTAGA
TGTATGCTGGAATAGCTCTGTGGGCACATAAAATGCCTTTTTCTTTTGTAACCAGAAGTT
GTTATTGCTGAGCCAAAGTGAAATCTCCTTCCAATTGGTGGACAACCAATTGGCTTTGAA
TTTGATTAGAGCTTCAAATTTGCCTTGAAGGTCCATGCGCTTTACACATTTCATAAAGAT
GTTTGATTACCTGTGTTATAATCCAACAAACTAAAAAATTTATTTGAATAGGTTATCTAC
GTCCCACAAGGGTGATTGAGTTGGTTGAACAGGAATATTGGGGTTTTAGGTTCGAAATCC
ATTGCATGCTTTTTTGGTTGAAATAATCACACAACTTTTGTCTAGTGCTTCTGTATTGTT
CGTAGGCTACTACACTAGAGTGAAATTTGCCATGCGCAACTTCAATAATCCATAGACATC
GTATTTATTCCATTGAGATGTATGTTAGTGTGAATGTGACTGAATTTTAATATTAAAGCG
AAGTTATAATTTGAACTTTATGAATAAGAATATCATATGTTAATATTAAATTCTAAAACT
TCTATACACAAAATTTTCTTTATATAAATATAATTTATAACTTAGTTTTGGTGAATTTGT
GATTAATTATATAGCTTTGCAGTTGTTTGTTAAAAAATAAGAGAGAAAATGACATATATA
TACTTTCTTTTATATTTCCCCCTTCAAAACCCACCTCATGAAGGGTATCAATAGTCTTTC
CTCATTTCATCATGCCTTTAGCGTGACTCGAACCTCCGAACCAAATCATAGATGCTCCAA
GCAAACCAATATTAATTAATTGA