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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g111150.3.1
CDS Infomation

Extracellular ligand-gated ion channel protein (AHRD V3.3 *** A0A072U3Z3_MEDTR)
Sequence

ACTCAAACACAAGGACCATTTTGTCAATTGAAAAAGACTGACGAATCCAGAATTTTGTCT
ACTTTTCAGCAAAAACAATTACAACTGGTTCAAATCTTGCACCTTTTTCAGCAGCTAACT
CCGGTCATGGCCGCCGCCGAGTGCCGCCCACCAGAGCCCGGAGCCGACGACGACAACTCT
ATTCACGTCTCGCTTATTGACGCTATTCAACACTTCACCGATCTAGACGTTTCCTTAAAT
AAGCTCGAACGCTTTCTGCGAGTTTTAGGTTTCTGTCAGTATTCCATTTTCAGCGCTGCA
CTATCCTGGCTGGCTTTTTTTGTCTTCTCCATTGTTGTGCCTCTTCTCGTAGTTTACTAT
GGTTACTGCTCTAACTGTGAGCTGTATCAGATTAATGACTTTGAGCTCGAAGTTCTAGTA
TGCCAATCTGTTGCCGCTTTCATATCACTGTTGTGCATCTCGCACAATCTCCGTAAATAT
CGCATTAGGAAGTTGCTTTTCGTGGATCGATACCATGGTCAACTGACTCATTTCAGTGAG
CTATATCTAAAGAAGATACGAGTCTTTTATTATTTGGTGGTTTCGTGGATGGCAATATTC
TTTTTGATGAAGATAGCTCGTGAAGTCACTAGAGCTGTGCATATTCATGATGGTTCTATA
TGGTGGTCAATTGGAATTGTGGTTGCTTCACTTGTATCATGGGCATATTCTACCATTATA
TTTATAGTGGGAACTGCTCTGTTTCATCTGGTGGGCAATTTGCAAGTTATACACTTGGAA
CATTTTGGCGAGCTTTTGGAAATGGATATGGATGTCTCAGTTTACATCAATGAACATATG
CGTCTGACTTGTTATGTGTGTAAAATTAGCCACAGGTTTAGGATGTTCCTCCTCCTGGAG
TACTTAATAGTCACAGTCAGTCAATGTGTAGTTCTATTGCAGACAACAAAAAATCAAAAA
GTCGTCAACTTCGTAAATGCTGGTGATTTTGTGGTAATATCAATTGTTCAACTGGTTGGA
CTACTTATATGCCTGAATGCAGCTGCAAAGATATCGCACAGAGCACAAGGGCTGGGATCA
GTAGCCAGTAGATGGCATGCACTAGTTACTTGTAATAGCAATGATGCTTCTGTTTCCGAA
TCTTCATCTGATGGTAGAAATGTTGAAACACCAAAAACAGGGGGGCAGTTATCTGTAAAT
TATTCAGAAGGTGATTTGGAGTCCGCTGATTGTATGCCTCCACCTGCAAATATACAACTC
ACTTCTACTATGACGTCATATCACAAGAGACAAGCATTTGTGACTTATGTGGAGTCTAAC
CCTGGTGGTTTTAGCATTTATGGATGGAGGGTTGATCGATTACTCATTAACACGCTTTTC
TTCGTTGAGATGACATTGGTTACTTTTCTACTTGGGATGACTCTAACAGTTAAAGTTTAG

Peptide Sequence

PEP ID

Solyc03g111150.3.1
PEP Infomation

Extracellular ligand-gated ion channel protein (AHRD V3.3 *** A0A072U3Z3_MEDTR)
Sequence

TQTQGPFCQLKKTDESRILSTFQQKQLQLVQILHLFQQLTPVMAAAECRPPEPGADDDNS
IHVSLIDAIQHFTDLDVSLNKLERFLRVLGFCQYSIFSAALSWLAFFVFSIVVPLLVVYY
GYCSNCELYQINDFELEVLVCQSVAAFISLLCISHNLRKYRIRKLLFVDRYHGQLTHFSE
LYLKKIRVFYYLVVSWMAIFFLMKIAREVTRAVHIHDGSIWWSIGIVVASLVSWAYSTII
FIVGTALFHLVGNLQVIHLEHFGELLEMDMDVSVYINEHMRLTCYVCKISHRFRMFLLLE
YLIVTVSQCVVLLQTTKNQKVVNFVNAGDFVVISIVQLVGLLICLNAAAKISHRAQGLGS
VASRWHALVTCNSNDASVSESSSDGRNVETPKTGGQLSVNYSEGDLESADCMPPPANIQL
TSTMTSYHKRQAFVTYVESNPGGFSIYGWRVDRLLINTLFFVEMTLVTFLLGMTLTVKV*

Transcript Sequence

Transcript ID

Solyc03g111150.3.1
Transcript Infomation

Extracellular ligand-gated ion channel protein (AHRD V3.3 *** A0A072U3Z3_MEDTR)
Sequence

ACTCAAACACAAGGACCATTTTGTCAATTGAAAAAGACTGACGAATCCAGAATTTTGTCT
ACTTTTCAGCAAAAACAATTACAACTGGTTCAAATCTTGCACCTTTTTCAGCAGCTAACT
CCGGTCATGGCCGCCGCCGAGTGCCGCCCACCAGAGCCCGGAGCCGACGACGACAACTCT
ATTCACGTCTCGCTTATTGACGCTATTCAACACTTCACCGATCTAGACGTTTCCTTAAAT
AAGCTCGAACGCTTTCTGCGAGTTTTAGGTTTCTGTCAGTATTCCATTTTCAGCGCTGCA
CTATCCTGGCTGGCTTTTTTTGTCTTCTCCATTGTTGTGCCTCTTCTCGTAGTTTACTAT
GGTTACTGCTCTAACTGTGAGCTGTATCAGATTAATGACTTTGAGCTCGAAGTTCTAGTA
TGCCAATCTGTTGCCGCTTTCATATCACTGTTGTGCATCTCGCACAATCTCCGTAAATAT
CGCATTAGGAAGTTGCTTTTCGTGGATCGATACCATGGTCAACTGACTCATTTCAGTGAG
CTATATCTAAAGAAGATACGAGTCTTTTATTATTTGGTGGTTTCGTGGATGGCAATATTC
TTTTTGATGAAGATAGCTCGTGAAGTCACTAGAGCTGTGCATATTCATGATGGTTCTATA
TGGTGGTCAATTGGAATTGTGGTTGCTTCACTTGTATCATGGGCATATTCTACCATTATA
TTTATAGTGGGAACTGCTCTGTTTCATCTGGTGGGCAATTTGCAAGTTATACACTTGGAA
CATTTTGGCGAGCTTTTGGAAATGGATATGGATGTCTCAGTTTACATCAATGAACATATG
CGTCTGACTTGTTATGTGTGTAAAATTAGCCACAGGTTTAGGATGTTCCTCCTCCTGGAG
TACTTAATAGTCACAGTCAGTCAATGTGTAGTTCTATTGCAGACAACAAAAAATCAAAAA
GTCGTCAACTTCGTAAATGCTGGTGATTTTGTGGTAATATCAATTGTTCAACTGGTTGGA
CTACTTATATGCCTGAATGCAGCTGCAAAGATATCGCACAGAGCACAAGGGCTGGGATCA
GTAGCCAGTAGATGGCATGCACTAGTTACTTGTAATAGCAATGATGCTTCTGTTTCCGAA
TCTTCATCTGATGGTAGAAATGTTGAAACACCAAAAACAGGGGGGCAGTTATCTGTAAAT
TATTCAGAAGGTGATTTGGAGTCCGCTGATTGTATGCCTCCACCTGCAAATATACAACTC
ACTTCTACTATGACGTCATATCACAAGAGACAAGCATTTGTGACTTATGTGGAGTCTAAC
CCTGGTGGTTTTAGCATTTATGGATGGAGGGTTGATCGATTACTCATTAACACGCTTTTC
TTCGTTGAGATGACATTGGTTACTTTTCTACTTGGGATGACTCTAACAGTTAAAGTTTAG