Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g111140.3.1
CDS Infomation

Malate synthase (AHRD V3.3 *** K4BJX7_SOLLC)
Sequence

ATGGTTAGCTTTGAGACATTTCTTCCAACCAATAACCCTGTTCAAAGAAAGAACAGTGGA
ACAATGGGATATGATGTACCTGAAGGAGTAGACATTAGGGGAAGATATGATCCTGAATTT
TCCAAGATTTTAACTAGGGATGCTTTGCAATTTGTAACTGATTTGCAGAGGGAATTCAGG
AACCATATTAAGTATGCTATGGAGTGCAGGAGAGAGGCCAAAATGAGGTATAATAATGGA
GGTTTGCCGGGTTTTGATCCGGCAACCAAATATATTAGGGAAGGAGAATGGGTGTGTGCT
CCTGTGCCAGCGGCGGTGGCTGATCGGAGGGTGGAGATTACTGGACCAGTTGAGAGGAAG
ATGGTCATCAATGCCCTCAATTCTGGTGCCAAAGTTTTCATGGCTGACTTTGAAGATGCA
CTGTCACCAAGCTGGGAGAATTTAATGAGAGGCCATGTAAATTTGAGGGATGCAGTGAAT
AGAACAATAACATTCCATGATCAAGCCAGAAACAAAGTGTATAAACTGAATGATCAGACA
GCTAAGTTATTTGTGCGCCCAAGAGGGTGGCATTTGCCAGAAGCTCACATCTTCATTGAT
GGTGAGCCTGCCACGGGTTGCCTTGTCGACTTCGGCCTCTACTTTTTCCACAACTATGCC
AACTTCCGCAAGGCCCAAGGACAAGGATTTGGACCTTTTTTCTATCTTCCGAAGATGGAA
CATTCTAGGGAAGCTAGAATATGGAACAATGTGTTTGACAGGGCAGAGAAATGGGCTGGA
ATTGAGAAGGGAAGCATTAGGGCCACTGTCTTGATTGAAACACTTCCAGCAGTGTTTCAG
ATGAATGAAATCTTGTATGAACTGAGGGACCATTCTGTTGGCCTCAATTGTGGTAGATGG
GATTACATTTTCAGCTATGTCAAGACTTTTCAGGGTCATCCCGATCGATTACTCCCTGAT
AGGGTTCAAGTTGGCATGGGTCAACACTTTATGAGGAGTTACTCTGACTTGCTTATCCAT
ACCTGTCATAAGCGTGGTGTCCATGCTATGGGAGGCATGGCAGCTCAAATTCCAATCAGA
GATGATCCAGCAGCTAACGATGCAGCATTGGAACTCGTAAGGAAGGATAAGCTCCGAGAA
GTGAAGGCAGGGCATGATGGAACATGGGCAGCTCACCCTGGCTTAATTCCAGCCTGCATG
GAAGTCTTTACCAACAACATGGCCAATGCTCCTAACCAAATCAATTCCATGAAGCGCCAA
GATGCATCGGTTCTAATTGAAGATGACCTACTGCAGAGTCCAAGAGGGGTCCGAACCATG
GAGGGCCTCAGGCTGAACACCCGAGTGGGAATTCAGTACTTGGCTGCTTGGCTGACAGGG
GCTGGTTCTGTTCCACTCTACAACCTCATGGAGGATGCTGCCACAGCTGAGATTAGCCGA
GTCCAGAACTGGCAGTGGCTGAAATATGGAGTGGAATTGGATGGAGATGGACTTGGGGTG
AAAGTGAACTTAGATCTGTTTGGAAGAGTGGTTGAAGAAGAAATGGCTAGGATTGAGAGA
GAAGTTGGAAAGGAGAAGTTCAAGAAGGGAATGTATAAGGAGGCCTGCAAACTATTCACA
AGGCAATGCACTGCACCAGTCTTGGATGATTTTCTGACTCTTGATGCCTATAATAACATT
GTCATGTATCATCCTATTGGGTCGTCCCGGCTCTAA

Peptide Sequence

PEP ID

Solyc03g111140.3.1
PEP Infomation

Malate synthase (AHRD V3.3 *** K4BJX7_SOLLC)
Sequence

MVSFETFLPTNNPVQRKNSGTMGYDVPEGVDIRGRYDPEFSKILTRDALQFVTDLQREFR
NHIKYAMECRREAKMRYNNGGLPGFDPATKYIREGEWVCAPVPAAVADRRVEITGPVERK
MVINALNSGAKVFMADFEDALSPSWENLMRGHVNLRDAVNRTITFHDQARNKVYKLNDQT
AKLFVRPRGWHLPEAHIFIDGEPATGCLVDFGLYFFHNYANFRKAQGQGFGPFFYLPKME
HSREARIWNNVFDRAEKWAGIEKGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRW
DYIFSYVKTFQGHPDRLLPDRVQVGMGQHFMRSYSDLLIHTCHKRGVHAMGGMAAQIPIR
DDPAANDAALELVRKDKLREVKAGHDGTWAAHPGLIPACMEVFTNNMANAPNQINSMKRQ
DASVLIEDDLLQSPRGVRTMEGLRLNTRVGIQYLAAWLTGAGSVPLYNLMEDAATAEISR
VQNWQWLKYGVELDGDGLGVKVNLDLFGRVVEEEMARIEREVGKEKFKKGMYKEACKLFT
RQCTAPVLDDFLTLDAYNNIVMYHPIGSSRL*

Transcript Sequence

Transcript ID

Solyc03g111140.3.1
Transcript Infomation

Malate synthase (AHRD V3.3 *** K4BJX7_SOLLC)
Sequence

ATGGTTAGCTTTGAGACATTTCTTCCAACCAATAACCCTGTTCAAAGAAAGAACAGTGGA
ACAATGGGATATGATGTACCTGAAGGAGTAGACATTAGGGGAAGATATGATCCTGAATTT
TCCAAGATTTTAACTAGGGATGCTTTGCAATTTGTAACTGATTTGCAGAGGGAATTCAGG
AACCATATTAAGTATGCTATGGAGTGCAGGAGAGAGGCCAAAATGAGGTATAATAATGGA
GGTTTGCCGGGTTTTGATCCGGCAACCAAATATATTAGGGAAGGAGAATGGGTGTGTGCT
CCTGTGCCAGCGGCGGTGGCTGATCGGAGGGTGGAGATTACTGGACCAGTTGAGAGGAAG
ATGGTCATCAATGCCCTCAATTCTGGTGCCAAAGTTTTCATGGCTGACTTTGAAGATGCA
CTGTCACCAAGCTGGGAGAATTTAATGAGAGGCCATGTAAATTTGAGGGATGCAGTGAAT
AGAACAATAACATTCCATGATCAAGCCAGAAACAAAGTGTATAAACTGAATGATCAGACA
GCTAAGTTATTTGTGCGCCCAAGAGGGTGGCATTTGCCAGAAGCTCACATCTTCATTGAT
GGTGAGCCTGCCACGGGTTGCCTTGTCGACTTCGGCCTCTACTTTTTCCACAACTATGCC
AACTTCCGCAAGGCCCAAGGACAAGGATTTGGACCTTTTTTCTATCTTCCGAAGATGGAA
CATTCTAGGGAAGCTAGAATATGGAACAATGTGTTTGACAGGGCAGAGAAATGGGCTGGA
ATTGAGAAGGGAAGCATTAGGGCCACTGTCTTGATTGAAACACTTCCAGCAGTGTTTCAG
ATGAATGAAATCTTGTATGAACTGAGGGACCATTCTGTTGGCCTCAATTGTGGTAGATGG
GATTACATTTTCAGCTATGTCAAGACTTTTCAGGGTCATCCCGATCGATTACTCCCTGAT
AGGGTTCAAGTTGGCATGGGTCAACACTTTATGAGGAGTTACTCTGACTTGCTTATCCAT
ACCTGTCATAAGCGTGGTGTCCATGCTATGGGAGGCATGGCAGCTCAAATTCCAATCAGA
GATGATCCAGCAGCTAACGATGCAGCATTGGAACTCGTAAGGAAGGATAAGCTCCGAGAA
GTGAAGGCAGGGCATGATGGAACATGGGCAGCTCACCCTGGCTTAATTCCAGCCTGCATG
GAAGTCTTTACCAACAACATGGCCAATGCTCCTAACCAAATCAATTCCATGAAGCGCCAA
GATGCATCGGTTCTAATTGAAGATGACCTACTGCAGAGTCCAAGAGGGGTCCGAACCATG
GAGGGCCTCAGGCTGAACACCCGAGTGGGAATTCAGTACTTGGCTGCTTGGCTGACAGGG
GCTGGTTCTGTTCCACTCTACAACCTCATGGAGGATGCTGCCACAGCTGAGATTAGCCGA
GTCCAGAACTGGCAGTGGCTGAAATATGGAGTGGAATTGGATGGAGATGGACTTGGGGTG
AAAGTGAACTTAGATCTGTTTGGAAGAGTGGTTGAAGAAGAAATGGCTAGGATTGAGAGA
GAAGTTGGAAAGGAGAAGTTCAAGAAGGGAATGTATAAGGAGGCCTGCAAACTATTCACA
AGGCAATGCACTGCACCAGTCTTGGATGATTTTCTGACTCTTGATGCCTATAATAACATT
GTCATGTATCATCCTATTGGGTCGTCCCGGCTCTAA