Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g098620.3.1
CDS Infomation

DNA-binding RHL1-like protein (AHRD V3.3 *** A0A0B0MTJ7_GOSAR)
Sequence

ATGGCTCGAGGAGGGAAAAAGGCAGCAAATGGAGAATCCAATCCAGATATGGAGGAGAAG
AAGAGGTTAAAGAAACTTGCAATTTCGAAGCAAATGCTCTCAGAGAATCCTTCAAGGGTT
AATAATTTTCTGAGTCCATCAAAAACTGTGATTAAACACCATGGTAAAGACATTTTGCGC
AAATCTCAACGGAAGAATCGTTTCCTCTTTTCTCTTCCCGGTTTACTTGCCCCGGTTTCC
GGAGGTAAAATTGGTGAGCTCAAAGACCTTGGTACCAAAAACCCTATTCTCTACCTCGAC
TTCCCTCAGGGTCAAATGAAGTTGTTTGGGACAATTGTATATCCAAAGAATGGTTATCTG
ACTATGCAGTTCTCCAGAGGTGGGAAGAATGTAGTGTGTGAAGATTACCTTGACAATATG
ATTGTGTTTTCTGATGCATGGTGGATAGGGAGGAAAGATGAGAATCCTGAAGAAGCACGA
CTCGAGTTTCCAAAAGAGCTGAACGTGCAGCAAGAGCAATTGGAGTGTGATTTTAAAGGT
GGTGCTGGTGCTACATGTGTTAAAAAACGAAGTACTAGTGAATGTGGGGTCAAGCATGTG
GAACAACAGTCTCCTGAACATGAACAGGAGGAGTTATTATCAGAAAGTCAAAATGATTCA
AAAGATTTTATCGAATTAACTCCATCTCGTCGTTCAGCAAGGGCAGCAGGAAAAAAATTC
AATTTTGCAGAAGCATCTTCGGGGGATGAAATGGTTGACAATGAAGTCGAATCTTCCGAG
GAAGAAGAGAAAACTGGTAGTGACATTCTTTGTCATGAAACTGTGGTACAAAGTCAAGTT
ACTGGAAAAATTACTGCCCTTGCCGAAACTGCTTCCAAGTCTAAGAAATCCCCCCGTACT
AAGCAAAGTTCTCTTGTTCAGGCTACTATTTCAACAATGTTTAAGAAAGTGGACAAGCTT
GTCACTCCAGATAGAGTTTCTCAAAGGAAAACAAGAAAATCAACAAACAAAGGGGAATCC
AACACAGAATGTGGTTCAACCATACCTGCTCATGTTGGTACTTCTCAGGGTGAAGATGAT
ATTGAAGAGTTGTCTAGTTCATCTAAGAATATGACAACTATTCTCAATGGATCTGCAAAT
TACTCTTGCGGACAAATGTTGTAA

Peptide Sequence

PEP ID

Solyc03g098620.3.1
PEP Infomation

DNA-binding RHL1-like protein (AHRD V3.3 *** A0A0B0MTJ7_GOSAR)
Sequence

MARGGKKAANGESNPDMEEKKRLKKLAISKQMLSENPSRVNNFLSPSKTVIKHHGKDILR
KSQRKNRFLFSLPGLLAPVSGGKIGELKDLGTKNPILYLDFPQGQMKLFGTIVYPKNGYL
TMQFSRGGKNVVCEDYLDNMIVFSDAWWIGRKDENPEEARLEFPKELNVQQEQLECDFKG
GAGATCVKKRSTSECGVKHVEQQSPEHEQEELLSESQNDSKDFIELTPSRRSARAAGKKF
NFAEASSGDEMVDNEVESSEEEEKTGSDILCHETVVQSQVTGKITALAETASKSKKSPRT
KQSSLVQATISTMFKKVDKLVTPDRVSQRKTRKSTNKGESNTECGSTIPAHVGTSQGEDD
IEELSSSSKNMTTILNGSANYSCGQML*

Transcript Sequence

Transcript ID

Solyc03g098620.3.1
Transcript Infomation

DNA-binding RHL1-like protein (AHRD V3.3 *** A0A0B0MTJ7_GOSAR)
Sequence

ATCTTATATATGGGTAGCTTAACTATAATAGTATTTCTTTTAATTTTGTTCTTAACAAAC
GGGGAATTAATAAAATTGTTTTTTCACTACCGCTCCACCAGCATCGGTGGATTTAGCATT
TTTCTTTTCATAAACTTCTGCTCGTATTCGTTCCTAAGCTAACTGCAGTTTCCATCAACT
GTTCCGGCGGAGTTAGGGCTATGGCTCGAGGAGGGAAAAAGGCAGCAAATGGAGAATCCA
ATCCAGATATGGAGGAGAAGAAGAGGTTAAAGAAACTTGCAATTTCGAAGCAAATGCTCT
CAGAGAATCCTTCAAGGGTTAATAATTTTCTGAGTCCATCAAAAACTGTGATTAAACACC
ATGGTAAAGACATTTTGCGCAAATCTCAACGGAAGAATCGTTTCCTCTTTTCTCTTCCCG
GTTTACTTGCCCCGGTTTCCGGAGGTAAAATTGGTGAGCTCAAAGACCTTGGTACCAAAA
ACCCTATTCTCTACCTCGACTTCCCTCAGGGTCAAATGAAGTTGTTTGGGACAATTGTAT
ATCCAAAGAATGGTTATCTGACTATGCAGTTCTCCAGAGGTGGGAAGAATGTAGTGTGTG
AAGATTACCTTGACAATATGATTGTGTTTTCTGATGCATGGTGGATAGGGAGGAAAGATG
AGAATCCTGAAGAAGCACGACTCGAGTTTCCAAAAGAGCTGAACGTGCAGCAAGAGCAAT
TGGAGTGTGATTTTAAAGGTGGTGCTGGTGCTACATGTGTTAAAAAACGAAGTACTAGTG
AATGTGGGGTCAAGCATGTGGAACAACAGTCTCCTGAACATGAACAGGAGGAGTTATTAT
CAGAAAGTCAAAATGATTCAAAAGATTTTATCGAATTAACTCCATCTCGTCGTTCAGCAA
GGGCAGCAGGAAAAAAATTCAATTTTGCAGAAGCATCTTCGGGGGATGAAATGGTTGACA
ATGAAGTCGAATCTTCCGAGGAAGAAGAGAAAACTGGTAGTGACATTCTTTGTCATGAAA
CTGTGGTACAAAGTCAAGTTACTGGAAAAATTACTGCCCTTGCCGAAACTGCTTCCAAGT
CTAAGAAATCCCCCCGTACTAAGCAAAGTTCTCTTGTTCAGGCTACTATTTCAACAATGT
TTAAGAAAGTGGACAAGCTTGTCACTCCAGATAGAGTTTCTCAAAGGAAAACAAGAAAAT
CAACAAACAAAGGGGAATCCAACACAGAATGTGGTTCAACCATACCTGCTCATGTTGGTA
CTTCTCAGGGTGAAGATGATATTGAAGAGTTGTCTAGTTCATCTAAGAATATGACAACTA
TTCTCAATGGATCTGCAAATTACTCTTGCGGACAAATGTTGTAAATTCAATTGAAGAAAC
TGCCAATCTGGATGCCAAGGAGGACACCACGAAGTGAACGTCACATGGGCATGCCATGTC
GGTGCTCTAGGAGGATGATTCTCCTATAAGACTCGAAGACTACATTTGGGAAGGAGGAGG
ATTCTGTGAAGTAAGCCAAAGTTAGTTATGGAAGAATGTGTATAAAGCCATATGAATGTA
ATATGTGATCAGCAGGCTGAAGTAGTTAGTTTGTTCAGATTTTGTCTCTGAATTCCAATT
CCCCTAGGTCTTTTGGTGTTGAATCGTTTGTTTTACAGTTCAGATATCAGTTATCGCATA
ATCAGTGATTATATACCAGTTTTGAGTTGAGATTTTATTATAACAAACCTTGCTATCGAT
TTCAGGAATATGTCAGTCTTACCCTTAAATGTAGTTCTGGAAAAGTCATGAATACAAAGG
CTAGAGAAGTGTCATCTTCTACTGAAACTATACAAATATTCATGAAGTGAGGAACCCTTG
AATTGATGAACTAAAATGTGATTCAACATTGAGATAAACCAACTTCTCGTGCATTGGTCT
ATCAGTCTATCACTATCTTAAACAGCAATGTAACTAGAGTGGTTTATATAATCCTATTTA
GAAATTCTGCTTCGTTCAAGTTCGTTGTATTAAACATGTTTTTGTGAGAATACACTTAAC
ATAACTATACCTCAGTTACAAACCAGTTGTAATTGACTATATAGATACTTGCTACCATGT
TTCTCTATTTAAATTCATCTTATGTCATATGTAGAGCATACACAGACGAATTCTAACACA
TCCAATATTCATAAGATCCTTCTTTGACTATCAACTTAGAGCCACCTTTCTCCTTCATTC
GTGTTTCAAACAGATACACTTGGTGAAACCAAACAAGCAAAACTATTAAAGAGACTTTCA
ACCTCAAAAACTAGCTCTCATTTTCGCACGATGAAAGTCGGAATGGAAACCCAAAACCAA
CTCTCATAATTGAAACACTCAAATAATTCTTTACTGACATTATATCTGCAAAAAATCATC
TCATAACACGCTGCATTCTTTGATTCCAACTAGACAAAAGTCTAAATATGTACAACAGCT
GAATTATGAAACTCTAAGCTTACAAATAGATAAGATTCTAACTGTGACCAGTAAGCCAAT
CCTGAAAAGGGGATCCTATCAGTACGCTAAGCTATGTACAGAGAGTACCATCTTATAAAC
AAAAAATACAAGGATCAGAAACAGTTAGCGTCGCCTGGACAGGAAAAACTCATAATCGGG
ATGTATGTTCACAAGCTTATCACTTCCAATCTTTCTTACGGCTCGTGACATAATTGATGC
AGTCTGCTCTAATGTTCTTAGTCGC