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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g097750.3.1
CDS Infomation

Translocon-associated protein subunit beta (AHRD V3.3 *** A0A0D2RZS2_GOSRA),Pfam:PF05753
Sequence

ATGGCGACAGCACCATTGATAATCTTCACCATTTTTGCGCTTTTTGGAGTTTCCTCTTTA
ACAGGGGCAGCAGAAACTTCGTTTGTGGTGTCTCACAAGAAGGCTTCACTCCTAAAACTC
AAGTCCGGCACCGAACGGGTCTCCGTTTCCATTGACGTCTATAATCATGGATCTGTTGCT
ATATATGATGTAAATCTTACTGATGATAGCTGGTCCACAGAAATATTTGATTTCGTGGCT
GGAAACACGTCCAATTCATGGGAAAAACTTGATGCTGGCTCTCATGTTTCACACACTTTT
AAGTTGGAATCCAAAGTGCAAACAACTTACTACAGTGCTCCTGCTGTCATAACTTATCGT
ATTCCTACAAAATCAAAACTACAGGTAGCATATTCCACCCCTGTTCCTGCACTAGAAACC
TTAGCAGAAAAAGCTGTTGCCTACAAATTAGATTTGGCAAAGAAGTTGCTTGCAGAGTAT
GGATCCCATTTTTCTTTAGTTCTCATCGTCTATTTGTTCGTGCGAATTATATCTAGTCCA
TCATCTAAATCAAGTTCTGGAAATGAAAAGAAAAGACATTGA

Peptide Sequence

PEP ID

Solyc03g097750.3.1
PEP Infomation

Translocon-associated protein subunit beta (AHRD V3.3 *** A0A0D2RZS2_GOSRA),Pfam:PF05753
Sequence

MATAPLIIFTIFALFGVSSLTGAAETSFVVSHKKASLLKLKSGTERVSVSIDVYNHGSVA
IYDVNLTDDSWSTEIFDFVAGNTSNSWEKLDAGSHVSHTFKLESKVQTTYYSAPAVITYR
IPTKSKLQVAYSTPVPALETLAEKAVAYKLDLAKKLLAEYGSHFSLVLIVYLFVRIISSP
SSKSSSGNEKKRH*

Transcript Sequence

Transcript ID

Solyc03g097750.3.1
Transcript Infomation

Translocon-associated protein subunit beta (AHRD V3.3 *** A0A0D2RZS2_GOSRA),Pfam:PF05753
Sequence

TTCCTCCACGTTTATATAATTTTTCATATTCATCTCCTCCTAAACATTTAATTTGCTAAT
GGCGACAGCACCATTGATAATCTTCACCATTTTTGCGCTTTTTGGAGTTTCCTCTTTAAC
AGGGGCAGCAGAAACTTCGTTTGTGGTGTCTCACAAGAAGGCTTCACTCCTAAAACTCAA
GTCCGGCACCGAACGGGTCTCCGTTTCCATTGACGTCTATAATCATGGATCTGTTGCTAT
ATATGATGTAAATCTTACTGATGATAGCTGGTCCACAGAAATATTTGATTTCGTGGCTGG
AAACACGTCCAATTCATGGGAAAAACTTGATGCTGGCTCTCATGTTTCACACACTTTTAA
GTTGGAATCCAAAGTGCAAACAACTTACTACAGTGCTCCTGCTGTCATAACTTATCGTAT
TCCTACAAAATCAAAACTACAGGTAGCATATTCCACCCCTGTTCCTGCACTAGAAACCTT
AGCAGAAAAAGCTGTTGCCTACAAATTAGATTTGGCAAAGAAGTTGCTTGCAGAGTATGG
ATCCCATTTTTCTTTAGTTCTCATCGTCTATTTGTTCGTGCGAATTATATCTAGTCCATC
ATCTAAATCAAGTTCTGGAAATGAAAAGAAAAGACATTGATCGTTCATCAGCTGTAGCAA
ACTTCTCTTTTGCAGAGGCAAGGCCTGATACCTGATCGTTCATCAGCTGTAGCAAACTTC
ACTCGTACAAATTCGTCTAATTGCATTTTGATGAACTGAAATGTATTAGATGAATTTACT
CGGGCTATATATGAAATTTTACTTGCAAAAAATATTTAAGTTACTTTATTTACATGTAAA
TCTTATTGAGATGCCTGCCTAATCAATCTAATAAAAAATTACTTTTATGTATATAAAG