Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g097370.3.1
CDS Infomation	DNA-binding SMUBP-2 (AHRD V3.3 *** A0A0B0N417_GOSAR)
Sequence	ATGCAAGTGAAACTGTTAAAGATGGAAGCTTCTTGCAATTTCTGCAGTAGCATCTATACT TTAGCTCCTAGTTGCCTCAGTCTTCGTTTCCGTCAAAAAAGATCCAATCTTTCTTCTTTT ATTGCCAAGAATCGGACCTTTCTGGATTCTATTTCTATTCGAGCAACTGCAAGTAGTAGT AGTAGTGGTGGTGGCACTAAGGCTGTTACTACCCGGAGAAGAAAACCCAAGAATGGTGGA ACCAATGGTGGGTCCGGCAAGAATGCGAAAGTTAGTGAGATTCCTGCAGTTTCAACAAAA GGGTCGTCGGGGAAAGTGGTAGACAAAGTACAGGTAAAGAGAAAAAAGCAGCAGGAAGAG TGTTTCCAGGATGATGGGCCGGTGAACGTGCGAGCACTGCATCAGAATGGTGACCCTTTG GGGCGTAAAGATTTGGGTAAGTGTGTGGTTAGGTGGTTATCTCAAGGAATGAGAGCTATG GCTTTGGATTTCGTTACAGCAGAGATGCAGGGAGAGTTTGCTGAGCTTAAGCAGAGAATG GAACCAGGATTGACTTTTGTTATTCAAGCTCAGCCTTATATTAATGCTGTCCCTATGCCT CTTGGTCTTGAAGCTATTTGCTTGAAGGCTTGCACCCATTATCCTACCCTTTTCGACAAC TTCCAGCGTGAGCTCAGAGAGGTTCTTCAGGACTTTCAGAGCAAGTCATCCGTCCAAGAT TGGCGTGAGACTGAGTCATGGAAGCTGCTCAAGGATCTCGCCAGTTCAGCTCAGCATAAA GCCATCGCAAGGAAGGAATCTCAACCAAAATCTGTTCCTGGTGTAATGGGAATGGACCTC GAGAAAGCAAAAGCCATTCAGAGTAGGATTGATGATTTCGCCAATCGTATGTCAGATTTG CTGCATATCGAAAGGGATGCTGAATTGGAGTTCACTCAGGAAGAGTTGAATGCTGTCCCT GCACCGGATGTTACTTCTGAGGCTCAGAAGCCATTAGAATTCCTGGTTAGCCATGCGCAG CCTGAGCAGGAACTCTGTGATACTATCTGCAATCTGACAGCAGTTAGCACATCTATAGTA TTTACTGCCTCCATTGAACCGGGACATGTTTTTGCATTACACACAGGATTAGGTGGAATG CATTTAGTGTTGTTCAAATTGGAGGGAAATCACAGATTGCCTCCAACTAACCTCTCACCT GGAGACATGGTTTGTGTCAGAATATGTGATAGTAGAGGCGCTGGCGCAACTTCTTGCATG CAAGGATTTGTGCATAACCTAGGCGAGGACGAACGTAGCATCAGTTTGGCTCTTGAATCA CTTCAGGGAGATACTACCTTTTCCAAGCTCTTTGGGAAAAATGTCCGCATTGATCGTATT CAAGGATTGGCTGATGCACTCACATACGAGCGCAATTGTGAAGCCTTAATGATGCTTCAG AAGAAAGGGTTTCGGAAGAAAAATCCTTCAGTAGCGGTGGTAGCTACACTTTTTGGAGAC AAAGAAGACCATAAGTGGCTTGAGGAGAATGACATGGCAGATTGGGCTGAAGTGGAACTT CCTGATTCTACCTGCAGAAAATCTTTTGATGCTTCCCAAAGAAAAGCAATTGCATTAGGT TTAAACAAGAATCGACCTATAATGATAATTCAAGGGCCTCCTGGCACAGGGAAGACTGGT TTGCTTAAGGAATTGATTTCTCTTGCTGTAAAACAAGGTGAAAGGGTGCTTGTAACTGCA CCGACAAATGCAGCTGTGGACAACATGGTTGAAAAGTTGTCTGATATTGGAATCAACATT GTTCGGGTTGGAAATCCTGCACGAATATCCCCTGATGTTGCTTCAAAATCTTTGGCTGAA ATTGTGAATAACAGGCTGTCTGATTTCCGAGCAGAAATTGAGAGGAAGAAGTCAGATCTT AGAAGGGACCTGAGGTATTGTCTTAAGGATGACTCTTTAGCTGCTGGTATACGTCAACTT CTGAAACAGCTTGGGAAGTCCATCAAGAAGAAAGAGAAGGAAACTGTGAAGGAAATCTTA ACAACTGCTCATGTTGTGCTTGCAACAAACATTGGGGCAGCTGATCCACTAATTAGACGG CTGGATGCATTTGATTTGGTTATTATAGATGAAGCTGGCCAAGCAATTGAACCATCATCT TGGATACCAATATTGCTCGGAAAGCGTTGTATACTTGCAGGAGATCAATTCCAGCTTGCT CCTGTGATCCTTTCTAGGAAAGCCTTAGAAGGTGGCCTTGGAGTTTCATTACTGGAGAGG GCAGCAACTTTGCATGATGGGATGCTGTCGACAAAGTTAACAACACAGTACAGAATGAAC GATGCCATAGCTAGCTGGGCTTCAAAGGAGATGTATGATGGATCTTTAACATCGTCTCCA ACCGTTGCTTCTCATCTTCTGGTGGATTCTCCTTTTGTCAAGCCAACATGGATTACACAG TGTCCGCTGTTATTGCTTGATACGAGAATGCCTTACGGAAGCTTATCAGTTGGTTGTGAA GAGCATCTGGACCCTGCTGGCACTGGCTCCTTTTTCAATGAAGGGGAAGCAGAAATCGTT ATTCAACATATATTCAGTTTAATTTATGCTGGTGTTCCTCCTGCAGCCATTGCTGTGCAG TCTCCTTATGTTGCTCAAGTGCAACTACTTAGAGACAGGATTGATGAGATTCCAATGGCT ACTGGCGTTGATGTTGCAACTATTGATAGCTTTCAAGGCCGTGAAGCAGATGCTGTGATT ATATCCATGGTTCGATCAAACAATTTGGGGGCAGTTGGCTTTTTGGGAGACAACAGGCGA ATGAATGTTGCAATAACAAGGGCGCGCAAGCATGTAGCAGTTGTCTGTGACAGTTCAACT ATATGTCACAACACATATTTGGCCAGGCTTCTTCGTCATATTAGATATGTTGGCAAAGTA AAGCATGTTGAACCCGGCAGCTTCTGGGAATTTGGCCTTGGTATGGATCCAATGTTGCCT ACTACCAGTTAA

Peptide Sequence

PEP ID	Solyc03g097370.3.1
PEP Infomation	DNA-binding SMUBP-2 (AHRD V3.3 *** A0A0B0N417_GOSAR)
Sequence	MQVKLLKMEASCNFCSSIYTLAPSCLSLRFRQKRSNLSSFIAKNRTFLDSISIRATASSS SSGGGTKAVTTRRRKPKNGGTNGGSGKNAKVSEIPAVSTKGSSGKVVDKVQVKRKKQQEE CFQDDGPVNVRALHQNGDPLGRKDLGKCVVRWLSQGMRAMALDFVTAEMQGEFAELKQRM EPGLTFVIQAQPYINAVPMPLGLEAICLKACTHYPTLFDNFQRELREVLQDFQSKSSVQD WRETESWKLLKDLASSAQHKAIARKESQPKSVPGVMGMDLEKAKAIQSRIDDFANRMSDL LHIERDAELEFTQEELNAVPAPDVTSEAQKPLEFLVSHAQPEQELCDTICNLTAVSTSIV FTASIEPGHVFALHTGLGGMHLVLFKLEGNHRLPPTNLSPGDMVCVRICDSRGAGATSCM QGFVHNLGEDERSISLALESLQGDTTFSKLFGKNVRIDRIQGLADALTYERNCEALMMLQ KKGFRKKNPSVAVVATLFGDKEDHKWLEENDMADWAEVELPDSTCRKSFDASQRKAIALG LNKNRPIMIIQGPPGTGKTGLLKELISLAVKQGERVLVTAPTNAAVDNMVEKLSDIGINI VRVGNPARISPDVASKSLAEIVNNRLSDFRAEIERKKSDLRRDLRYCLKDDSLAAGIRQL LKQLGKSIKKKEKETVKEILTTAHVVLATNIGAADPLIRRLDAFDLVIIDEAGQAIEPSS WIPILLGKRCILAGDQFQLAPVILSRKALEGGLGVSLLERAATLHDGMLSTKLTTQYRMN DAIASWASKEMYDGSLTSSPTVASHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCE EHLDPAGTGSFFNEGEAEIVIQHIFSLIYAGVPPAAIAVQSPYVAQVQLLRDRIDEIPMA TGVDVATIDSFQGREADAVIISMVRSNNLGAVGFLGDNRRMNVAITRARKHVAVVCDSST ICHNTYLARLLRHIRYVGKVKHVEPGSFWEFGLGMDPMLPTTS*

Transcript Sequence

Transcript ID	Solyc03g097370.3.1
Transcript Infomation	DNA-binding SMUBP-2 (AHRD V3.3 *** A0A0B0N417_GOSAR)
Sequence	ATATTCGATTGATTTTTAGAAAAACAAAAGGTTTGCTCACTATTGGAAAGGCTAATTTTG TCAATTTAATGTTTTCATTCATGTGTAATATTATTGAATGCACATATTTTCTTATTCCAT AGTTTATGTCACACACACCAAACAATATAGAGATATCTTTCATTAACTTCATGTGAGTAT TATATTTGAAAGGAAAAAAAAAGAAGCAAAACACTAATAAAATTTTTTATTGGATATTCC GTATAGAAACTTAATTAAATCTAGTATATTTAATTAAAAATAAATTTTTTTATCACTTTA TAATAACATTTATTTTTGTATCAAAGCTATATAAAAAATATAAAATAAAATATTCAATGT AATCGACCAAAAGACTTCTCGAATTGGAGAAATGAAGATGTGGTGTAAGATGGTTCTAAA GAAGAAAGTTCCAAAGAAGAATCGCCGTCCCTTCACACTGCCACAGCGTTTTCCATAGGC TAAATGTTGAGGACAGAAAATGAACACGTTGGATCAATACACAGCTCACAAAGCCCTATT AGAATCTCAAATACCCAATAGGAAGACGTGTTCGGACTCTGATCTTCCCCTCTTTCTTTT TGATTATGACGTTCTAAATTGCCCTAAAAATCTCTACTTGAATGGTTGCCTCCACCCCCC TAAAGCTTATTTATTTATTTGTACTTTCACTATTCCAAGAATCTTGATCTTCATTCAATG GCACCCTGATACTGTTTCCTAGTACTCTGTTTTGGGTTCAGGATGCAAGTGAAACTGTTA AAGATGGAAGCTTCTTGCAATTTCTGCAGTAGCATCTATACTTTAGCTCCTAGTTGCCTC AGTCTTCGTTTCCGTCAAAAAAGATCCAATCTTTCTTCTTTTATTGCCAAGAATCGGACC TTTCTGGATTCTATTTCTATTCGAGCAACTGCAAGTAGTAGTAGTAGTGGTGGTGGCACT AAGGCTGTTACTACCCGGAGAAGAAAACCCAAGAATGGTGGAACCAATGGTGGGTCCGGC AAGAATGCGAAAGTTAGTGAGATTCCTGCAGTTTCAACAAAAGGGTCGTCGGGGAAAGTG GTAGACAAAGTACAGGTAAAGAGAAAAAAGCAGCAGGAAGAGTGTTTCCAGGATGATGGG CCGGTGAACGTGCGAGCACTGCATCAGAATGGTGACCCTTTGGGGCGTAAAGATTTGGGT AAGTGTGTGGTTAGGTGGTTATCTCAAGGAATGAGAGCTATGGCTTTGGATTTCGTTACA GCAGAGATGCAGGGAGAGTTTGCTGAGCTTAAGCAGAGAATGGAACCAGGATTGACTTTT GTTATTCAAGCTCAGCCTTATATTAATGCTGTCCCTATGCCTCTTGGTCTTGAAGCTATT TGCTTGAAGGCTTGCACCCATTATCCTACCCTTTTCGACAACTTCCAGCGTGAGCTCAGA GAGGTTCTTCAGGACTTTCAGAGCAAGTCATCCGTCCAAGATTGGCGTGAGACTGAGTCA TGGAAGCTGCTCAAGGATCTCGCCAGTTCAGCTCAGCATAAAGCCATCGCAAGGAAGGAA TCTCAACCAAAATCTGTTCCTGGTGTAATGGGAATGGACCTCGAGAAAGCAAAAGCCATT CAGAGTAGGATTGATGATTTCGCCAATCGTATGTCAGATTTGCTGCATATCGAAAGGGAT GCTGAATTGGAGTTCACTCAGGAAGAGTTGAATGCTGTCCCTGCACCGGATGTTACTTCT GAGGCTCAGAAGCCATTAGAATTCCTGGTTAGCCATGCGCAGCCTGAGCAGGAACTCTGT GATACTATCTGCAATCTGACAGCAGTTAGCACATCTATAGTATTTACTGCCTCCATTGAA CCGGGACATGTTTTTGCATTACACACAGGATTAGGTGGAATGCATTTAGTGTTGTTCAAA TTGGAGGGAAATCACAGATTGCCTCCAACTAACCTCTCACCTGGAGACATGGTTTGTGTC AGAATATGTGATAGTAGAGGCGCTGGCGCAACTTCTTGCATGCAAGGATTTGTGCATAAC CTAGGCGAGGACGAACGTAGCATCAGTTTGGCTCTTGAATCACTTCAGGGAGATACTACC TTTTCCAAGCTCTTTGGGAAAAATGTCCGCATTGATCGTATTCAAGGATTGGCTGATGCA CTCACATACGAGCGCAATTGTGAAGCCTTAATGATGCTTCAGAAGAAAGGGTTTCGGAAG AAAAATCCTTCAGTAGCGGTGGTAGCTACACTTTTTGGAGACAAAGAAGACCATAAGTGG CTTGAGGAGAATGACATGGCAGATTGGGCTGAAGTGGAACTTCCTGATTCTACCTGCAGA AAATCTTTTGATGCTTCCCAAAGAAAAGCAATTGCATTAGGTTTAAACAAGAATCGACCT ATAATGATAATTCAAGGGCCTCCTGGCACAGGGAAGACTGGTTTGCTTAAGGAATTGATT TCTCTTGCTGTAAAACAAGGTGAAAGGGTGCTTGTAACTGCACCGACAAATGCAGCTGTG GACAACATGGTTGAAAAGTTGTCTGATATTGGAATCAACATTGTTCGGGTTGGAAATCCT GCACGAATATCCCCTGATGTTGCTTCAAAATCTTTGGCTGAAATTGTGAATAACAGGCTG TCTGATTTCCGAGCAGAAATTGAGAGGAAGAAGTCAGATCTTAGAAGGGACCTGAGGTAT TGTCTTAAGGATGACTCTTTAGCTGCTGGTATACGTCAACTTCTGAAACAGCTTGGGAAG TCCATCAAGAAGAAAGAGAAGGAAACTGTGAAGGAAATCTTAACAACTGCTCATGTTGTG CTTGCAACAAACATTGGGGCAGCTGATCCACTAATTAGACGGCTGGATGCATTTGATTTG GTTATTATAGATGAAGCTGGCCAAGCAATTGAACCATCATCTTGGATACCAATATTGCTC GGAAAGCGTTGTATACTTGCAGGAGATCAATTCCAGCTTGCTCCTGTGATCCTTTCTAGG AAAGCCTTAGAAGGTGGCCTTGGAGTTTCATTACTGGAGAGGGCAGCAACTTTGCATGAT GGGATGCTGTCGACAAAGTTAACAACACAGTACAGAATGAACGATGCCATAGCTAGCTGG GCTTCAAAGGAGATGTATGATGGATCTTTAACATCGTCTCCAACCGTTGCTTCTCATCTT CTGGTGGATTCTCCTTTTGTCAAGCCAACATGGATTACACAGTGTCCGCTGTTATTGCTT GATACGAGAATGCCTTACGGAAGCTTATCAGTTGGTTGTGAAGAGCATCTGGACCCTGCT GGCACTGGCTCCTTTTTCAATGAAGGGGAAGCAGAAATCGTTATTCAACATATATTCAGT TTAATTTATGCTGGTGTTCCTCCTGCAGCCATTGCTGTGCAGTCTCCTTATGTTGCTCAA GTGCAACTACTTAGAGACAGGATTGATGAGATTCCAATGGCTACTGGCGTTGATGTTGCA ACTATTGATAGCTTTCAAGGCCGTGAAGCAGATGCTGTGATTATATCCATGGTTCGATCA AACAATTTGGGGGCAGTTGGCTTTTTGGGAGACAACAGGCGAATGAATGTTGCAATAACA AGGGCGCGCAAGCATGTAGCAGTTGTCTGTGACAGTTCAACTATATGTCACAACACATAT TTGGCCAGGCTTCTTCGTCATATTAGATATGTTGGCAAAGTAAAGCATGTTGAACCCGGC AGCTTCTGGGAATTTGGCCTTGGTATGGATCCAATGTTGCCTACTACCAGTTAACCTTGA AAGAGTTCAACAAAACCAAATTTTTAATGCTTCTGCCCATCTGGTGAATGTTTGGGCGGA CTCTCACATACGTTGATGCCCTGGTTCGATCTGCAAATTATATATTCAGGTTTTTGACCA CGAGAACAAAGCACGGGGTAATTTTCATTTGTATATATAATTCAAAGAAAAAACTTTATG AAACATGTAAATATATATTCATACAGCTACGATGTCTATACGATTCTTGATTGTTTAACT ATAGTTAATGATTTTCCTTGTATTTGGATCAGCATGAAGATTCTGTTTAAACAAGTATCA AATTCATTCACTGTAGTTGTTCATATATACATGAAGTACATTTGGAAGTTTTTAT