Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g097280.3.1
CDS Infomation	Alanine--tRNA ligase (AHRD V3.3 - K4BJE6_SOLLC)
Sequence	ATGGAGAAGAAAAAGTCTCGTAAAGAAAGTAGAAAAGAAGCTCGGAAGGCTAAAAAGCAT AAGAAGTTTGATTCGTGGATCCAACATCAACAAACACAAAAAGCCCGGAGAATGTTGCCA AATTCAAAACCAACACACACAGTGCATTCACGGAAGGATAGCCAAGTACAAAGGCATGAA CATTTACACTCCTTAAATTCAAAGAAAGACTTGGACACTTCTCCACGGTTGGATTCTTCT AAGGTGGAAAATACGAGTTTGAAAAGGAAACATGTCTCAAGTAAAAATTCAAAGACAATG TTTATGGAGTATCTTAAAATGGAAAAGAAGGGAGACGCTATCTCTGCGGACGTAGATCTG AGATTGGAGAGGAAACTCGCTAAGAAACTCAAGGTGAAGAATGAGAAATTGCGAGGAGAG GATGATATCGATATGTTACTTGAAGGAATTCCTTCTGTAGTTGACTGTAACAGTCAACTG AATGAATCTCTGGAGGGTACTGATACTGACTCTTCACACAAGAAACTGAAAAAAAAGACA GTGGTTGAAGTTTTAGATGGTAAACTGGTTTCTGAGGATGGAAAGTTTGATCCTTCATGT GTTAGCTATGTTGAGCATGTCGACACAGATTTACTGGCCAAACAAAAAGAGTCAAAAAAG ATGAAAAGAAAGAAGACAAAGTTTGAAGAGCTTCTTGCAACTGAAATGCGTGGACAGGAT ATCTCCGCAGATGAGGATCTGGCTTTGGAAAGGAAGCTTGCGAAGAAGCTCAAGGTGAAG AGAGGGAAATTACTTGGGGATCATGATGATATGAATAATTTATTTGAGGGAATTCCTTCA CTTCTGGATTCTTTTGAGGATGAAAATACACAACTTGTTGGAGAAACACCTCGAAAGCGT GATACGAGCTCCTCAAATGAAAGATCTAAAGAGAAAAGATATAATAAAGAAGTGCAAGGA GAAGATTACAATCAAGAGGAAGAGCAGAAAGCTGAGAGCACTTCATACTGTACAGATGTG AAGGCAGCAGCTAGATCTGCTGCCAAAGAAAATGCAATATATGTTGCTCCTCGCCTGAGG TCATGCTTGGGAAATGATTCGGAAGAGTTCGCTCAAATTCGTCGACGACTAAGAGGTCTT CTGAATAGGATGTCCGAGGCTAACGTGGAATCGATCACAAGTGAAATTTCCACGATCTAC CAGACTGTTGGTCGCACCTTTGGTTCTCAGATTATCAATGATGAGGTTCTGGCATCATGT TCTAGAGGTCCGCGTGGCAATGAACAGTATGCAGCAGTTTTTGCTGCTTTTGTTGCTGGC ATGGCATGTTTGGTTGGGATGGACTTTGGCGCCAAACTTCTGGCATCTATGGCTAAATGT TTTGAGGATGAGTATCAGAATGAAGATAACCTCTCTGTTAGGAACCTGACACTTCTGCTC TCATACTTGTACACTTTTGGTGTTTGCTCAAGTGACTTGATATATGATTTCTTGGTGACA TTGAGCAAGAGACTGACAGAAGTGGATGTTTCTACCATATTGACAGTGCTTCAAGCTTGT GGGATGAAATTGAGAGGTGATGATCCTGTTGGCATGAAGAATTTTATAGTTAGCGTTCAG AATAGGGTGAATGAATTGAAATCCTCATCTGGGGAAGGACAATCAAACAGTATGGGGAAA AGGATGGAATTCATGCTTGAGATGATATGTGATATCAAAAACAATAAAAAAAGGACGAAG GAGGAGACCTTGCAGCTTACCCGAATAAAGAAATGGCTACAACAGCTCAGAGTAGTTGAT ATATTGATTCGAGGGTTAAAGTGGAGCAAGCTGATTGATCCTGACAAGAGAGGCCAGTGG TGGATGTCTGGAAATATTGATTCCACAACTGATGTTCAAGATGTTGCCAGCACAATTGAT TTGGAGGTCACTGAGGCTCAAAAGATGCTCCAGCTTGCTGCTGCTCAGAGGATGAATACT GATGCAAGAAGGGCAATTTTCTGCGTAATAATGAGTGGGGAGGACTATATAGATGCATTT GAGAAACTTCTAAGATTAGATTTGCAAGGCAAGCAGGAGAAAGCTTTTAACAAATACTAT TGTGCTCTAGCTTCCAAGTTATGCAGCCATGATAAAAACAATAAGTTCACCCTGCAGTAC TGTCTGTGGGATCATTTCAAGGAGCTTGATCAGATGCAGCTGATCAGATCAATGCACTTA TCCAAGTTTGTTGCAGAGATGGTTGCTTCTTTTAGCCTTTCACTTGCTGTACTGAAGGCT GTTGATCTCAGTGATTCTTCACAATTGACTCCAAAAAGAATCATGCACTTTCGGATGCTA TTTGAGACTATCTTGGAGTTTCCTGAAAAGCTTGTCTGGAACATCTTTACTCGAATTGCT CTTTTGCCAGAGTATGAATCACTTCGTGATGGGATTGTCTTCTTTATCCGCAAGTATGTC ATTGATAGCCAAAAGTCTCTGGCAGATAAATTCAAGATTGCAAAGAAGGCTCTTAACAAT GTTGAAGGAGTCATCATAGCTGCCACACTTCCTTCTTCCGCCGCCTTGCTGCTTCCTCCG TCGCCGGCGGTGAGTGGACGGCTGTTTAATTTCACACGTACCTTTTCTGTTTCAAAGCCG ATGGGTTCTCAGCCGGAAGTATTGGATTGGCCGGCCAATAAGGTCCGGCAGACTTTTATC AGCTTCTTCCAAGGGAAAGATCATAAAGAGGTTCAATCCAGTCCTGTAGTTCCTCATAAT GACCCTACTCTTCTATTCGCTAATGCTGGGATGAATCAGTTTAAGCCTATTTTCTTGGGT ATTGTTGACCCTAATAGTCCGTTGAGTAAACTTAAGCGTGCCTGCGATACACAGAAGTGT ATTCGTGCTGGTGGCAAGCATAATGATCTTGATGATGTTGGTAAGGATACTTACCATCAC ACATTCTTTGAGATGCTTGGTAATTGGTCATTTGGGGATTATTTCAAGAAGGAGGCAATT GGATGGGCCTGGGAACTACTTACCCAGGCAAGTTTTAACCTCATTAATAGTTAG

Peptide Sequence

PEP ID	Solyc03g097280.3.1
PEP Infomation	Alanine--tRNA ligase (AHRD V3.3 - K4BJE6_SOLLC)
Sequence	MEKKKSRKESRKEARKAKKHKKFDSWIQHQQTQKARRMLPNSKPTHTVHSRKDSQVQRHE HLHSLNSKKDLDTSPRLDSSKVENTSLKRKHVSSKNSKTMFMEYLKMEKKGDAISADVDL RLERKLAKKLKVKNEKLRGEDDIDMLLEGIPSVVDCNSQLNESLEGTDTDSSHKKLKKKT VVEVLDGKLVSEDGKFDPSCVSYVEHVDTDLLAKQKESKKMKRKKTKFEELLATEMRGQD ISADEDLALERKLAKKLKVKRGKLLGDHDDMNNLFEGIPSLLDSFEDENTQLVGETPRKR DTSSSNERSKEKRYNKEVQGEDYNQEEEQKAESTSYCTDVKAAARSAAKENAIYVAPRLR SCLGNDSEEFAQIRRRLRGLLNRMSEANVESITSEISTIYQTVGRTFGSQIINDEVLASC SRGPRGNEQYAAVFAAFVAGMACLVGMDFGAKLLASMAKCFEDEYQNEDNLSVRNLTLLL SYLYTFGVCSSDLIYDFLVTLSKRLTEVDVSTILTVLQACGMKLRGDDPVGMKNFIVSVQ NRVNELKSSSGEGQSNSMGKRMEFMLEMICDIKNNKKRTKEETLQLTRIKKWLQQLRVVD ILIRGLKWSKLIDPDKRGQWWMSGNIDSTTDVQDVASTIDLEVTEAQKMLQLAAAQRMNT DARRAIFCVIMSGEDYIDAFEKLLRLDLQGKQEKAFNKYYCALASKLCSHDKNNKFTLQY CLWDHFKELDQMQLIRSMHLSKFVAEMVASFSLSLAVLKAVDLSDSSQLTPKRIMHFRML FETILEFPEKLVWNIFTRIALLPEYESLRDGIVFFIRKYVIDSQKSLADKFKIAKKALNN VEGVIIAATLPSSAALLLPPSPAVSGRLFNFTRTFSVSKPMGSQPEVLDWPANKVRQTFI SFFQGKDHKEVQSSPVVPHNDPTLLFANAGMNQFKPIFLGIVDPNSPLSKLKRACDTQKC IRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIGWAWELLTQASFNLINS*

Transcript Sequence

Transcript ID	Solyc03g097280.3.1
Transcript Infomation	Alanine--tRNA ligase (AHRD V3.3 - K4BJE6_SOLLC)
Sequence	CAAAATAACACTATTATACTTTTAGCATAAATTGGTTATGTCAATTTATTTAAAAAAGCG CCTATTTCATTGGCCGAAAGAAATCAAATTTTAATCCTTATTAATTATTTTTCCTTCTAA TAATAATAATAATTAGCAGTAAAATAAAAGCTCTTAAAAAATACGGTTGAACTCAAAGCG AGCCGCTGAGAGCCAGTGCCAATTGTGTTTTCATCTAACTTTCAAGTTCCAACCTAACTC CGAAGGCCGCCGACGGCTTTTGCTGCTTCTGCCCCTCTCCCGTTTGCTGCAAAGCTCACA CAGAAAACCCTAACTCCCTACTCCGGAATTTGATAATGGAGAAGAAAAAGTCTCGTAAAG AAAGTAGAAAAGAAGCTCGGAAGGCTAAAAAGCATAAGAAGTTTGATTCGTGGATCCAAC ATCAACAAACACAAAAAGCCCGGAGAATGTTGCCAAATTCAAAACCAACACACACAGTGC ATTCACGGAAGGATAGCCAAGTACAAAGGCATGAACATTTACACTCCTTAAATTCAAAGA AAGACTTGGACACTTCTCCACGGTTGGATTCTTCTAAGGTGGAAAATACGAGTTTGAAAA GGAAACATGTCTCAAGTAAAAATTCAAAGACAATGTTTATGGAGTATCTTAAAATGGAAA AGAAGGGAGACGCTATCTCTGCGGACGTAGATCTGAGATTGGAGAGGAAACTCGCTAAGA AACTCAAGGTGAAGAATGAGAAATTGCGAGGAGAGGATGATATCGATATGTTACTTGAAG GAATTCCTTCTGTAGTTGACTGTAACAGTCAACTGAATGAATCTCTGGAGGGTACTGATA CTGACTCTTCACACAAGAAACTGAAAAAAAAGACAGTGGTTGAAGTTTTAGATGGTAAAC TGGTTTCTGAGGATGGAAAGTTTGATCCTTCATGTGTTAGCTATGTTGAGCATGTCGACA CAGATTTACTGGCCAAACAAAAAGAGTCAAAAAAGATGAAAAGAAAGAAGACAAAGTTTG AAGAGCTTCTTGCAACTGAAATGCGTGGACAGGATATCTCCGCAGATGAGGATCTGGCTT TGGAAAGGAAGCTTGCGAAGAAGCTCAAGGTGAAGAGAGGGAAATTACTTGGGGATCATG ATGATATGAATAATTTATTTGAGGGAATTCCTTCACTTCTGGATTCTTTTGAGGATGAAA ATACACAACTTGTTGGAGAAACACCTCGAAAGCGTGATACGAGCTCCTCAAATGAAAGAT CTAAAGAGAAAAGATATAATAAAGAAGTGCAAGGAGAAGATTACAATCAAGAGGAAGAGC AGAAAGCTGAGAGCACTTCATACTGTACAGATGTGAAGGCAGCAGCTAGATCTGCTGCCA AAGAAAATGCAATATATGTTGCTCCTCGCCTGAGGTCATGCTTGGGAAATGATTCGGAAG AGTTCGCTCAAATTCGTCGACGACTAAGAGGTCTTCTGAATAGGATGTCCGAGGCTAACG TGGAATCGATCACAAGTGAAATTTCCACGATCTACCAGACTGTTGGTCGCACCTTTGGTT CTCAGATTATCAATGATGAGGTTCTGGCATCATGTTCTAGAGGTCCGCGTGGCAATGAAC AGTATGCAGCAGTTTTTGCTGCTTTTGTTGCTGGCATGGCATGTTTGGTTGGGATGGACT TTGGCGCCAAACTTCTGGCATCTATGGCTAAATGTTTTGAGGATGAGTATCAGAATGAAG ATAACCTCTCTGTTAGGAACCTGACACTTCTGCTCTCATACTTGTACACTTTTGGTGTTT GCTCAAGTGACTTGATATATGATTTCTTGGTGACATTGAGCAAGAGACTGACAGAAGTGG ATGTTTCTACCATATTGACAGTGCTTCAAGCTTGTGGGATGAAATTGAGAGGTGATGATC CTGTTGGCATGAAGAATTTTATAGTTAGCGTTCAGAATAGGGTGAATGAATTGAAATCCT CATCTGGGGAAGGACAATCAAACAGTATGGGGAAAAGGATGGAATTCATGCTTGAGATGA TATGTGATATCAAAAACAATAAAAAAAGGACGAAGGAGGAGACCTTGCAGCTTACCCGAA TAAAGAAATGGCTACAACAGCTCAGAGTAGTTGATATATTGATTCGAGGGTTAAAGTGGA GCAAGCTGATTGATCCTGACAAGAGAGGCCAGTGGTGGATGTCTGGAAATATTGATTCCA CAACTGATGTTCAAGATGTTGCCAGCACAATTGATTTGGAGGTCACTGAGGCTCAAAAGA TGCTCCAGCTTGCTGCTGCTCAGAGGATGAATACTGATGCAAGAAGGGCAATTTTCTGCG TAATAATGAGTGGGGAGGACTATATAGATGCATTTGAGAAACTTCTAAGATTAGATTTGC AAGGCAAGCAGGAGAAAGCTTTTAACAAATACTATTGTGCTCTAGCTTCCAAGTTATGCA GCCATGATAAAAACAATAAGTTCACCCTGCAGTACTGTCTGTGGGATCATTTCAAGGAGC TTGATCAGATGCAGCTGATCAGATCAATGCACTTATCCAAGTTTGTTGCAGAGATGGTTG CTTCTTTTAGCCTTTCACTTGCTGTACTGAAGGCTGTTGATCTCAGTGATTCTTCACAAT TGACTCCAAAAAGAATCATGCACTTTCGGATGCTATTTGAGACTATCTTGGAGTTTCCTG AAAAGCTTGTCTGGAACATCTTTACTCGAATTGCTCTTTTGCCAGAGTATGAATCACTTC GTGATGGGATTGTCTTCTTTATCCGCAAGTATGTCATTGATAGCCAAAAGTCTCTGGCAG ATAAATTCAAGATTGCAAAGAAGGCTCTTAACAATGTTGAAGGAGTCATCATAGCTGCCA CACTTCCTTCTTCCGCCGCCTTGCTGCTTCCTCCGTCGCCGGCGGTGAGTGGACGGCTGT TTAATTTCACACGTACCTTTTCTGTTTCAAAGCCGATGGGTTCTCAGCCGGAAGTATTGG ATTGGCCGGCCAATAAGGTCCGGCAGACTTTTATCAGCTTCTTCCAAGGGAAAGATCATA AAGAGGTTCAATCCAGTCCTGTAGTTCCTCATAATGACCCTACTCTTCTATTCGCTAATG CTGGGATGAATCAGTTTAAGCCTATTTTCTTGGGTATTGTTGACCCTAATAGTCCGTTGA GTAAACTTAAGCGTGCCTGCGATACACAGAAGTGTATTCGTGCTGGTGGCAAGCATAATG ATCTTGATGATGTTGGTAAGGATACTTACCATCACACATTCTTTGAGATGCTTGGTAATT GGTCATTTGGGGATTATTTCAAGAAGGAGGCAATTGGATGGGCCTGGGAACTACTTACCC AGGCAAGTTTTAACCTCATTAATAGTTAG