Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g097030.3.1
CDS Infomation

4-coumarate--CoA ligase
Sequence

ATGGTGAGTGTAGCTACTGTGGATGCCCAAAAAGCAGAGATATTGTCTTCTGTGATTTCT
ACGAATCAAAATCAATCTTCGGAAGAGCTACATGTATTTAGATCGAAATTACCAGATATA
TCAATTTCCAATAACATACCGCTCCATGTTTACTTGTTCGAAAGGCTATCGGAGTTTGAG
GAGAGGACATGTATTATCGCGGGAAGTAGTGGAGAAACATTCACGTTTGGCGAAACGTAT
CTCATCTGCCAGAAAATTGCTGCTGGTTTGACAATGGTAGGGATCGAAAAGGGAGATGTT
ATCATGACTTTTCTACAGAACTGTTCGGAATTTGTGTTTACCATTCTAGCATCGTCTATG
ATTGGAGCTGTTATCACTACGGCTAATCCGTTCTATACGAAATCGGAAGCGTTTAAGCAG
TTGAAAGCTTCGAATGCGAAATTGATAGTAACTCAATCGCAGTATGTGGATAAATTCCGT
GATCCCGCGGAAAATGATCCGAAAATTGGGGAGGATTTTTCAGTCGTTACAATTGATGAT
CCGCCGGAGAATTGCTTGCATTTTTCTGTACTATCGGAAGCTAAAGCAGAGGATATGCCA
AAAGGAGTTGTTATCCACCCTGACGACCCCGTGGCTCTGCCGTTTTCGTCAGGGACCACG
GGGTTGCCGAAAGGTGTGATACTGACTCATAAAAGTTTGATAACAGGGGTGGCTCAATTA
GTAGATGGCGACAACCCGAATTTTTACTTGAAGCACGACGACGTGGTGCTGTGTGTGCTT
CCTCTGTTTCATATATTCGCGCTGAATTCAGTGCTTTTAGTCTCGTTAAGAGCTGGGGCT
AGTGTTCTGTTGATGCAAAAATTCGAAATTAGTGCGCTGTTGGAGCTGATACAAAAACAC
CGCGTCTCAGTCGCTGCTGTAGTTCCGCCACTGGTTCTTGCATTGGCGAAAAATCCAATG
GTGGATTCGTTCGATTTGAGCTCCATACGGCTCGTGCTGTCCGGGGCTGCGCCGCTGGGG
AAGGAGCTGGAGGAAGCACTCCATAGAAGAGTACCGCAAGCCATATTTGGACAGGGATAT
GGTATGACAGAAGCAGGACCAGTAGTGACAATGTGTCCAGCATTTGCAAAGCAACCATTT
TCAACTAAATCCGGTTCATGTGGCTCTGTGATTCGAAATGCGGACCTCAAGGTGGTTGAC
CCAGAAACCGGTAGCTCACTTCACCGTAACCAACCCGGTGAAATTTGCATTCGCGGTTCT
CAAATCATGAAAGGTTATCTCAATGACGATGAAGCCACTGCACGGACCATTGATGTCGAT
GGATGGCTCCACACCGGCGATATAGGATATGTTGATGACGATGATGAAATATATATCGTC
GATAGAGTCAAAGAGCTCATAAAGTTTAAAGGTTTCCAGGTGCCACCAGCTGAGCTTGAG
TCTCTTTTAATAAGCCATCCAGATATTGCAGATGCTGCTGTTGTGCCACAAAAGGATGAT
GCTGCAGGGGAAGTTCCAGTTGCATTTGTAGTCCGTTCAGCCCAAGGTTTTGATCTTACT
GAAGAAGCTATAAAGGAATTTATTGCCAAACAGGTGGTATTCTATAAAAAATTGCACAAG
GTGTATTTTATTCACGCGATTCCAAAGTCTCCATCTGGAAAGATACTAAGGAAAGATTTG
AGAGCCAAATTGATCGCGACACCACAACTATAA

Peptide Sequence

PEP ID

Solyc03g097030.3.1
PEP Infomation

4-coumarate--CoA ligase
Sequence

MVSVATVDAQKAEILSSVISTNQNQSSEELHVFRSKLPDISISNNIPLHVYLFERLSEFE
ERTCIIAGSSGETFTFGETYLICQKIAAGLTMVGIEKGDVIMTFLQNCSEFVFTILASSM
IGAVITTANPFYTKSEAFKQLKASNAKLIVTQSQYVDKFRDPAENDPKIGEDFSVVTIDD
PPENCLHFSVLSEAKAEDMPKGVVIHPDDPVALPFSSGTTGLPKGVILTHKSLITGVAQL
VDGDNPNFYLKHDDVVLCVLPLFHIFALNSVLLVSLRAGASVLLMQKFEISALLELIQKH
RVSVAAVVPPLVLALAKNPMVDSFDLSSIRLVLSGAAPLGKELEEALHRRVPQAIFGQGY
GMTEAGPVVTMCPAFAKQPFSTKSGSCGSVIRNADLKVVDPETGSSLHRNQPGEICIRGS
QIMKGYLNDDEATARTIDVDGWLHTGDIGYVDDDDEIYIVDRVKELIKFKGFQVPPAELE
SLLISHPDIADAAVVPQKDDAAGEVPVAFVVRSAQGFDLTEEAIKEFIAKQVVFYKKLHK
VYFIHAIPKSPSGKILRKDLRAKLIATPQL*

Transcript Sequence

Transcript ID

Solyc03g097030.3.1
Transcript Infomation

4-coumarate--CoA ligase
Sequence

CACCTTCTCTTCTTCCTTTTTATACCAATCTCTCTCTGTTTTCTTTCTCTTAAACTCATA
AAATTTTCTTCTTTCTCATAACCGGAAATGGTGAGTGTAGCTACTGTGGATGCCCAAAAA
GCAGAGATATTGTCTTCTGTGATTTCTACGAATCAAAATCAATCTTCGGAAGAGCTACAT
GTATTTAGATCGAAATTACCAGATATATCAATTTCCAATAACATACCGCTCCATGTTTAC
TTGTTCGAAAGGCTATCGGAGTTTGAGGAGAGGACATGTATTATCGCGGGAAGTAGTGGA
GAAACATTCACGTTTGGCGAAACGTATCTCATCTGCCAGAAAATTGCTGCTGGTTTGACA
ATGGTAGGGATCGAAAAGGGAGATGTTATCATGACTTTTCTACAGAACTGTTCGGAATTT
GTGTTTACCATTCTAGCATCGTCTATGATTGGAGCTGTTATCACTACGGCTAATCCGTTC
TATACGAAATCGGAAGCGTTTAAGCAGTTGAAAGCTTCGAATGCGAAATTGATAGTAACT
CAATCGCAGTATGTGGATAAATTCCGTGATCCCGCGGAAAATGATCCGAAAATTGGGGAG
GATTTTTCAGTCGTTACAATTGATGATCCGCCGGAGAATTGCTTGCATTTTTCTGTACTA
TCGGAAGCTAAAGCAGAGGATATGCCAAAAGGAGTTGTTATCCACCCTGACGACCCCGTG
GCTCTGCCGTTTTCGTCAGGGACCACGGGGTTGCCGAAAGGTGTGATACTGACTCATAAA
AGTTTGATAACAGGGGTGGCTCAATTAGTAGATGGCGACAACCCGAATTTTTACTTGAAG
CACGACGACGTGGTGCTGTGTGTGCTTCCTCTGTTTCATATATTCGCGCTGAATTCAGTG
CTTTTAGTCTCGTTAAGAGCTGGGGCTAGTGTTCTGTTGATGCAAAAATTCGAAATTAGT
GCGCTGTTGGAGCTGATACAAAAACACCGCGTCTCAGTCGCTGCTGTAGTTCCGCCACTG
GTTCTTGCATTGGCGAAAAATCCAATGGTGGATTCGTTCGATTTGAGCTCCATACGGCTC
GTGCTGTCCGGGGCTGCGCCGCTGGGGAAGGAGCTGGAGGAAGCACTCCATAGAAGAGTA
CCGCAAGCCATATTTGGACAGGGATATGGTATGACAGAAGCAGGACCAGTAGTGACAATG
TGTCCAGCATTTGCAAAGCAACCATTTTCAACTAAATCCGGTTCATGTGGCTCTGTGATT
CGAAATGCGGACCTCAAGGTGGTTGACCCAGAAACCGGTAGCTCACTTCACCGTAACCAA
CCCGGTGAAATTTGCATTCGCGGTTCTCAAATCATGAAAGGTTATCTCAATGACGATGAA
GCCACTGCACGGACCATTGATGTCGATGGATGGCTCCACACCGGCGATATAGGATATGTT
GATGACGATGATGAAATATATATCGTCGATAGAGTCAAAGAGCTCATAAAGTTTAAAGGT
TTCCAGGTGCCACCAGCTGAGCTTGAGTCTCTTTTAATAAGCCATCCAGATATTGCAGAT
GCTGCTGTTGTGCCACAAAAGGATGATGCTGCAGGGGAAGTTCCAGTTGCATTTGTAGTC
CGTTCAGCCCAAGGTTTTGATCTTACTGAAGAAGCTATAAAGGAATTTATTGCCAAACAG
GTGGTATTCTATAAAAAATTGCACAAGGTGTATTTTATTCACGCGATTCCAAAGTCTCCA
TCTGGAAAGATACTAAGGAAAGATTTGAGAGCCAAATTGATCGCGACACCACAACTATAA
TGCACTATTCAAAAGACCGTCTTTACGAAAAAAAGTATGTAATTGTATCGAAGATCACTT
ATACTTAAAAGTCTTTAACAGTATGGTATCAAGTCTTATAGATCCAATGACTAGTTCTGT
GAATGTTGATTTACTTTTTAAAAAAAAAAATTATTTTCTTCACTTTTTGTGTGAAGTTTC
TGGATTCTTTGAAAGGAAAACTTTCAGTTTTATAAATTCATGCACCATTATTTATTACTC
TTCCAAGTTCCATGTACCTCAATTATGTGAAGAACTATTTTATTTATTTATTGAAATTTG
TACTTACAATTGGTCCCATCAAGTTATGTAGTGTGTTGCTATGTGTATAATTTGTTAAAA
GAAAAGTTACATGGCAATAATTAACTAATACGCTGTTTTTATTATTTCTTCAACTTCTAA
AGCAGTTTTTTCATCTTTTATATAATGCGTGGATGA