Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g096830.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S1X8_RICCO)
Sequence	ATGGCGGCATCCACGGCGCTGCTGAGTATTGCTCCGCCGCAGTTCAGCTCAACAGCAAAA TCAAAGGTAACCCGAAAACCCCCTTTTTGTTCTTGCTCTCTAGATTCCTCAAATTCTGCT ACTACTAGTTCTACTGTTAGTGAAGAGCGAGATATTACTCCCAAGAAATTTACATATACC AGAGCTTCTCCATCTACTAGATGGCCCCACCTGAAATTCACGGAAACCCATCAAAATTCA CAGCCCTCCCCGTTATCTGTTGCCGCCCCATCTGTAAAAGATAAAGAATTTGATTCGGGA AGTGATGGGAATGTGGGTTCTTATGAGGGGAGAAGAATGGAGAAGAATGGTGAAGAGTCT TTGGACCCAAATGGGTTTCAATCTAATGATGAAACCCAAGAGGTTTTGGGTAGACCTAGT AGGACTAGGGCGAAGAAAATGACGAAACTTGCGCTCAAGAGGGCGAAAGATTGGCGTCAG AGGGTACAATTTTTAACTGATAAGATTTTGGGGCTGAAATCTGAGGAGTTTGTTGCTGAT GTGCTGGATGAAAAGATGGTGCAAATGACCCCTACTGATTTTTGCTTTGTGGTGAAATGG GTAGGTCAATCTAGTTGGCAAAGGGCATTGGAGGTTTATGAATGGTTGAATCTTCGAAAT TGGTATTCTCCGAATGCCAGAATGCTTGCAACAATACTTGCTGTGCTGGGCAAGGCTAAC CAGGAAGCATTGGCTGTGGAGATTTTTATGCGAGCAGAGCAAAGTATTGGAAACACGGTT CAAGTATATAATTCAATGATGGGTGTTTATGCTAGAAATGGGAGGTTTTCCCAGGTTCAG CAGTTACTTGAATTAATGCATGAGCGTGGGCTTGAGCCAGATCTTGTGAGTTTTAATACT TTGATTAATGCGCGTCTCAAATCAGGCCCTATGACACCAAACCTGGCAATTGAACTTCTT GATGAAGTAAGGAGTTCGGGAATTCAGCCTGACATAATAACTTATAACACTCTGATTAGT GCTTGTTCACGCGAATCAAATGTTGAGGAAGCTGTAAAAGTTTTTAATGATATGGAAAGT CATAGATGCCAACCTGATTTGTGGACGTATAATGCTATGATTTCAGTTTTTGGGAGATGT GGAATGGATGGTGAGGCTGCAAGGCTGTTCAATGAACTGGAGGCAAATGGATTTTATCCA GATGCAGTGACATATAATTCACTGCTCCATGCATTTGCTAGGCAGGGGAATATTGAGAAG GTTAAAGAAATCTGCGAAGAGATGGTGAACATGGGTTTTGGGAAGGACGAAATGACTTAT AATACCATTATTGACATGTATGGGAAACAGGGTCGGCATGACCTTGCATTACAAGTCTAC AATGACATGACGTCTTCTGGTCGAAGCCCTGATGTAATTACATATACTATTCTTATTGAC TCACTAGGGAAAGACAATAAAATGGCAGAGGCTTCAAAAGTGATGTCTGAGATGCTGAAT GCAGGGATAAAACCAACAGTGAGAACTTACAGTGCCTTGATTTGTGGTTATGCAAAGGTA GGGAAGAGGGTTGACGCAGAAGATATGTTCGACTGCATGGTACGTTCTGGAATTCAACCT GATCACTTGGCTTACACAGTGATGCTGGACATGAATCTGAGGTTTGGTGAGACCAAGAAA GCAATGATGTTGTATCATGACATGGTGCACAATGGATTCACGCCTGATCTTGCTCTATAT GAATTTATGCTCCGATCTCTTGGAAGAGCAAATGAAGAAGAAAATATCCAGATTGTGATC AAGGACTTGAAAGAACTGGGTAATTTGGGTCCGCAATCCATTTCATCTCTACTTATAAAG GGTGAATGCTATGACTTTGCAGCCAAAATGTTGAGATTAGTCATTGAGGAGGGTTCTGAA TTTAATCATGATGACCTGTTGTCTATTTTGGGTTCATACAGTTCATCTGGGAAGATCTCA GAAGCTATAAAGTTGCTGAACTTTGTGAAAGAGCATGATTCCAGGTCCAAGAAACTTATA ATTGATGCCTCAATAATTATTAACTGCAAAGCTCAAAATTTGAATGCTGCATTGGATGAA TACCGCGAGACAGGTGATTCATATACATTCAGTATTTCTGTGTTTGAGTCCCTCATCAAG TGTTGCGAGGAGGCTGAACTGTTTGCTGAAGCTTCTCAGATATTTTCTGATATGAGGGCC AAGGGTGTAGAACCTTCTCAGGATATTTGCGGAACAATTGCTGTCATTTACTGCAAGATG GGTTTCCCAGAAACAGCACATTATTTGATTGACCAGGTTGAAGCAAATGGTGTGCTCCTT GGTGACATCTCATTTCATGTAAGTCTTATTGAAGCATACGGTAAGCTCAAAGTAGTTGAA AAGGCAGAGAGTGTTGTGGCAACTATAGAACATCGGTATGGTGTTGTGGGAAGGACGGCT TATAATGCATTAATACAAGCTTATGCTTTAAGTGGTTTCTATGAGAAAGCTAGAGCTGTT TTCAATACCATGATGAGAAATGGTCCATCCCCTACAGTGGATACCATAAACAATCTCATG CAAGCATTAATTGTTGATGGTAGATTAAACGAGCTGTATGTTCTGATCCAGGAACTACAA GATATGGGTTTTAAGATTAGTAAGAGTTCCATTCTTTTGATGCTTGAGGCATTTGCTCAA GCTGGTAATATATTTGAAGTGAGGAAAATTTACCATGGAATGAGAGCTGCTGGATATTTA CCTACCATGCATCTTTATAGAGTTATAATTGGGTTACTGTCCAGAACTAAACAAGTGAGG GATGCTGAAGCCATGCTTTCTGAAATGGAGGAAGCTGGATTCAAGCCAGATCTTTCAATA TGGAATTCAATGCTCAAGTTATATACTAGAATTGAAGATTTCAAGAAGACAGTGCACATA TACCAGAGAATTCAAGAAGCTGGACTCAAACCAGATTTGGATACTTACAATACTTTGATA ATAATGTACTGTAGAGATCGTAGACCTCATGAATCTCTTTTGTTAGTGCATGAGATGAAA AGGCTGGATCTGTTTCCTGAGAGAGACACTTATAAAAGCCTGATTGCTGCATTTTGTAAG GAGCTGATGCTGGAACAAGCTGAAGAACTGTTCGAAAGCCTGAGGTCAGAAGGACATAAC CTCGATCGTTCTTTTTATCACTTAATGATGAAAATGTATAGAAGCTCTGGAAATCATTCT AAGGCTGAAAAACTAATAGAGAAGATGAAGGAATCAGGGATTGAACCATCTGATGCTACA ATGCATTTGCTGATGACTTCATATGGTACTTCAGGCCAGCCAATGGAAGCTGAGAAAGTG CTGAATAGTCTAAAGTCAAATGGTGTAAATCTCAGTACTCTACAATATGGCTCTGTTATT GATGCGTATCTCAAGAGCAGAGAATACGAGACTGGCCTTTTAAAGCTCAGGGAGATGATT GGGGATGGTCTAGAACCAGATCACAGGATATGGACTTGCTTTATCCGGGCTGCTAGTTTA TGCGAATACATTACTGAAGCCAAAACTCTTTTAAATGCTGTCGCTGATGCTGGTTTTAAT CTTCCTATCAGGCACAATTTGAATTTAATTTTCTTTTCTCTCTTCAAAAACTTCTATTTT CTGGGTGTGTGGCTGTCTTTGTGGGATGGGTTTGCTATATTCTTCCATTACCTCACTTCC ACTAACTGTTTGTCTCATAAATGCAGGTTTCTAACAGAGAATTCAGAGTCTCTGGTGTTG GACTTAGACCTGTACCTGGAGCAAATTGAAACTGCAGAGGATAAAGCAGCATTGAATTTT GTAAATGCTTTGGAAGACCTGTTATGGGCTTTTGAACTCCGTGCCACAGCCTCATGGGTT TTCCAGCTGGCTATTAAAAGGAGAATTTACCATAATGATATTTTCAGAGTGGCTGACAAG GATTGGGGGGCGGACTTCAGGAAGCTGTCTGCGGGTGCTGCTCTTGATGCATCCTTGGAG GGCTTTCCTGAATCTCCCAAATCCGTCGTACTGATTACTGGTAAATCTTACTACAACAGA GTTTCTTTAAATAGTACAGTGAGGGCATACGTTTGGGAGATGGGTTCTCCGTTTCTACCT TGTAAAACTCGAACTGGAATACTTGTTGCAAAAGCTCATTCCTTAAGAATGTGGTTGAAA GATTCCCCATTTTGCTTAGATCTTGAGTTGAAAAATAGGCCTAGCCTTCCAGAGATGAAC TCAATGCAGCTTATTGAAGGATGTTTTATTAGACGTGGCCTTGTTCCTGCTTTCAAGGAA ATTAATGAAAGGCTTGGGCCAGTAAACCCGAGGAAGTTTGCGAGGCTTGCTTTGCTGTCA AATGAAAAGAGGGAAAAAGTTATTCAAGCTGACATCGAGGGGAGAAGGGAAAAGTTAGCC AAGTTGAGGAGTACTGCTGTCACAAAGAGGAGGAATACAAAAAACTTCAGGATGAACAAA TTTGTCAGG

Peptide Sequence

PEP ID	Solyc03g096830.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S1X8_RICCO)
Sequence	MAASTALLSIAPPQFSSTAKSKVTRKPPFCSCSLDSSNSATTSSTVSEERDITPKKFTYT RASPSTRWPHLKFTETHQNSQPSPLSVAAPSVKDKEFDSGSDGNVGSYEGRRMEKNGEES LDPNGFQSNDETQEVLGRPSRTRAKKMTKLALKRAKDWRQRVQFLTDKILGLKSEEFVAD VLDEKMVQMTPTDFCFVVKWVGQSSWQRALEVYEWLNLRNWYSPNARMLATILAVLGKAN QEALAVEIFMRAEQSIGNTVQVYNSMMGVYARNGRFSQVQQLLELMHERGLEPDLVSFNT LINARLKSGPMTPNLAIELLDEVRSSGIQPDIITYNTLISACSRESNVEEAVKVFNDMES HRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTYNSLLHAFARQGNIEK VKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYNDMTSSGRSPDVITYTILID SLGKDNKMAEASKVMSEMLNAGIKPTVRTYSALICGYAKVGKRVDAEDMFDCMVRSGIQP DHLAYTVMLDMNLRFGETKKAMMLYHDMVHNGFTPDLALYEFMLRSLGRANEEENIQIVI KDLKELGNLGPQSISSLLIKGECYDFAAKMLRLVIEEGSEFNHDDLLSILGSYSSSGKIS EAIKLLNFVKEHDSRSKKLIIDASIIINCKAQNLNAALDEYRETGDSYTFSISVFESLIK CCEEAELFAEASQIFSDMRAKGVEPSQDICGTIAVIYCKMGFPETAHYLIDQVEANGVLL GDISFHVSLIEAYGKLKVVEKAESVVATIEHRYGVVGRTAYNALIQAYALSGFYEKARAV FNTMMRNGPSPTVDTINNLMQALIVDGRLNELYVLIQELQDMGFKISKSSILLMLEAFAQ AGNIFEVRKIYHGMRAAGYLPTMHLYRVIIGLLSRTKQVRDAEAMLSEMEEAGFKPDLSI WNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTYNTLIIMYCRDRRPHESLLLVHEMK RLDLFPERDTYKSLIAAFCKELMLEQAEELFESLRSEGHNLDRSFYHLMMKMYRSSGNHS KAEKLIEKMKESGIEPSDATMHLLMTSYGTSGQPMEAEKVLNSLKSNGVNLSTLQYGSVI DAYLKSREYETGLLKLREMIGDGLEPDHRIWTCFIRAASLCEYITEAKTLLNAVADAGFN LPIRHNLNLIFFSLFKNFYFLGVWLSLWDGFAIFFHYLTSTNCLSHKCRFLTENSESLVL DLDLYLEQIETAEDKAALNFVNALEDLLWAFELRATASWVFQLAIKRRIYHNDIFRVADK DWGADFRKLSAGAALDASLEGFPESPKSVVLITGKSYYNRVSLNSTVRAYVWEMGSPFLP CKTRTGILVAKAHSLRMWLKDSPFCLDLELKNRPSLPEMNSMQLIEGCFIRRGLVPAFKE INERLGPVNPRKFARLALLSNEKREKVIQADIEGRREKLAKLRSTAVTKRRNTKNFRMNK FVR

Transcript Sequence

Transcript ID	Solyc03g096830.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9S1X8_RICCO)
Sequence	ATGGCGGCATCCACGGCGCTGCTGAGTATTGCTCCGCCGCAGTTCAGCTCAACAGCAAAA TCAAAGGTAACCCGAAAACCCCCTTTTTGTTCTTGCTCTCTAGATTCCTCAAATTCTGCT ACTACTAGTTCTACTGTTAGTGAAGAGCGAGATATTACTCCCAAGAAATTTACATATACC AGAGCTTCTCCATCTACTAGATGGCCCCACCTGAAATTCACGGAAACCCATCAAAATTCA CAGCCCTCCCCGTTATCTGTTGCCGCCCCATCTGTAAAAGATAAAGAATTTGATTCGGGA AGTGATGGGAATGTGGGTTCTTATGAGGGGAGAAGAATGGAGAAGAATGGTGAAGAGTCT TTGGACCCAAATGGGTTTCAATCTAATGATGAAACCCAAGAGGTTTTGGGTAGACCTAGT AGGACTAGGGCGAAGAAAATGACGAAACTTGCGCTCAAGAGGGCGAAAGATTGGCGTCAG AGGGTACAATTTTTAACTGATAAGATTTTGGGGCTGAAATCTGAGGAGTTTGTTGCTGAT GTGCTGGATGAAAAGATGGTGCAAATGACCCCTACTGATTTTTGCTTTGTGGTGAAATGG GTAGGTCAATCTAGTTGGCAAAGGGCATTGGAGGTTTATGAATGGTTGAATCTTCGAAAT TGGTATTCTCCGAATGCCAGAATGCTTGCAACAATACTTGCTGTGCTGGGCAAGGCTAAC CAGGAAGCATTGGCTGTGGAGATTTTTATGCGAGCAGAGCAAAGTATTGGAAACACGGTT CAAGTATATAATTCAATGATGGGTGTTTATGCTAGAAATGGGAGGTTTTCCCAGGTTCAG CAGTTACTTGAATTAATGCATGAGCGTGGGCTTGAGCCAGATCTTGTGAGTTTTAATACT TTGATTAATGCGCGTCTCAAATCAGGCCCTATGACACCAAACCTGGCAATTGAACTTCTT GATGAAGTAAGGAGTTCGGGAATTCAGCCTGACATAATAACTTATAACACTCTGATTAGT GCTTGTTCACGCGAATCAAATGTTGAGGAAGCTGTAAAAGTTTTTAATGATATGGAAAGT CATAGATGCCAACCTGATTTGTGGACGTATAATGCTATGATTTCAGTTTTTGGGAGATGT GGAATGGATGGTGAGGCTGCAAGGCTGTTCAATGAACTGGAGGCAAATGGATTTTATCCA GATGCAGTGACATATAATTCACTGCTCCATGCATTTGCTAGGCAGGGGAATATTGAGAAG GTTAAAGAAATCTGCGAAGAGATGGTGAACATGGGTTTTGGGAAGGACGAAATGACTTAT AATACCATTATTGACATGTATGGGAAACAGGGTCGGCATGACCTTGCATTACAAGTCTAC AATGACATGACGTCTTCTGGTCGAAGCCCTGATGTAATTACATATACTATTCTTATTGAC TCACTAGGGAAAGACAATAAAATGGCAGAGGCTTCAAAAGTGATGTCTGAGATGCTGAAT GCAGGGATAAAACCAACAGTGAGAACTTACAGTGCCTTGATTTGTGGTTATGCAAAGGTA GGGAAGAGGGTTGACGCAGAAGATATGTTCGACTGCATGGTACGTTCTGGAATTCAACCT GATCACTTGGCTTACACAGTGATGCTGGACATGAATCTGAGGTTTGGTGAGACCAAGAAA GCAATGATGTTGTATCATGACATGGTGCACAATGGATTCACGCCTGATCTTGCTCTATAT GAATTTATGCTCCGATCTCTTGGAAGAGCAAATGAAGAAGAAAATATCCAGATTGTGATC AAGGACTTGAAAGAACTGGGTAATTTGGGTCCGCAATCCATTTCATCTCTACTTATAAAG GGTGAATGCTATGACTTTGCAGCCAAAATGTTGAGATTAGTCATTGAGGAGGGTTCTGAA TTTAATCATGATGACCTGTTGTCTATTTTGGGTTCATACAGTTCATCTGGGAAGATCTCA GAAGCTATAAAGTTGCTGAACTTTGTGAAAGAGCATGATTCCAGGTCCAAGAAACTTATA ATTGATGCCTCAATAATTATTAACTGCAAAGCTCAAAATTTGAATGCTGCATTGGATGAA TACCGCGAGACAGGTGATTCATATACATTCAGTATTTCTGTGTTTGAGTCCCTCATCAAG TGTTGCGAGGAGGCTGAACTGTTTGCTGAAGCTTCTCAGATATTTTCTGATATGAGGGCC AAGGGTGTAGAACCTTCTCAGGATATTTGCGGAACAATTGCTGTCATTTACTGCAAGATG GGTTTCCCAGAAACAGCACATTATTTGATTGACCAGGTTGAAGCAAATGGTGTGCTCCTT GGTGACATCTCATTTCATGTAAGTCTTATTGAAGCATACGGTAAGCTCAAAGTAGTTGAA AAGGCAGAGAGTGTTGTGGCAACTATAGAACATCGGTATGGTGTTGTGGGAAGGACGGCT TATAATGCATTAATACAAGCTTATGCTTTAAGTGGTTTCTATGAGAAAGCTAGAGCTGTT TTCAATACCATGATGAGAAATGGTCCATCCCCTACAGTGGATACCATAAACAATCTCATG CAAGCATTAATTGTTGATGGTAGATTAAACGAGCTGTATGTTCTGATCCAGGAACTACAA GATATGGGTTTTAAGATTAGTAAGAGTTCCATTCTTTTGATGCTTGAGGCATTTGCTCAA GCTGGTAATATATTTGAAGTGAGGAAAATTTACCATGGAATGAGAGCTGCTGGATATTTA CCTACCATGCATCTTTATAGAGTTATAATTGGGTTACTGTCCAGAACTAAACAAGTGAGG GATGCTGAAGCCATGCTTTCTGAAATGGAGGAAGCTGGATTCAAGCCAGATCTTTCAATA TGGAATTCAATGCTCAAGTTATATACTAGAATTGAAGATTTCAAGAAGACAGTGCACATA TACCAGAGAATTCAAGAAGCTGGACTCAAACCAGATTTGGATACTTACAATACTTTGATA ATAATGTACTGTAGAGATCGTAGACCTCATGAATCTCTTTTGTTAGTGCATGAGATGAAA AGGCTGGATCTGTTTCCTGAGAGAGACACTTATAAAAGCCTGATTGCTGCATTTTGTAAG GAGCTGATGCTGGAACAAGCTGAAGAACTGTTCGAAAGCCTGAGGTCAGAAGGACATAAC CTCGATCGTTCTTTTTATCACTTAATGATGAAAATGTATAGAAGCTCTGGAAATCATTCT AAGGCTGAAAAACTAATAGAGAAGATGAAGGAATCAGGGATTGAACCATCTGATGCTACA ATGCATTTGCTGATGACTTCATATGGTACTTCAGGCCAGCCAATGGAAGCTGAGAAAGTG CTGAATAGTCTAAAGTCAAATGGTGTAAATCTCAGTACTCTACAATATGGCTCTGTTATT GATGCGTATCTCAAGAGCAGAGAATACGAGACTGGCCTTTTAAAGCTCAGGGAGATGATT GGGGATGGTCTAGAACCAGATCACAGGATATGGACTTGCTTTATCCGGGCTGCTAGTTTA TGCGAATACATTACTGAAGCCAAAACTCTTTTAAATGCTGTCGCTGATGCTGGTTTTAAT CTTCCTATCAGGCACAATTTGAATTTAATTTTCTTTTCTCTCTTCAAAAACTTCTATTTT CTGGGTGTGTGGCTGTCTTTGTGGGATGGGTTTGCTATATTCTTCCATTACCTCACTTCC ACTAACTGTTTGTCTCATAAATGCAGGTTTCTAACAGAGAATTCAGAGTCTCTGGTGTTG GACTTAGACCTGTACCTGGAGCAAATTGAAACTGCAGAGGATAAAGCAGCATTGAATTTT GTAAATGCTTTGGAAGACCTGTTATGGGCTTTTGAACTCCGTGCCACAGCCTCATGGGTT TTCCAGCTGGCTATTAAAAGGAGAATTTACCATAATGATATTTTCAGAGTGGCTGACAAG GATTGGGGGGCGGACTTCAGGAAGCTGTCTGCGGGTGCTGCTCTTGATGCATCCTTGGAG GGCTTTCCTGAATCTCCCAAATCCGTCGTACTGATTACTGGTAAATCTTACTACAACAGA GTTTCTTTAAATAGTACAGTGAGGGCATACGTTTGGGAGATGGGTTCTCCGTTTCTACCT TGTAAAACTCGAACTGGAATACTTGTTGCAAAAGCTCATTCCTTAAGAATGTGGTTGAAA GATTCCCCATTTTGCTTAGATCTTGAGTTGAAAAATAGGCCTAGCCTTCCAGAGATGAAC TCAATGCAGCTTATTGAAGGATGTTTTATTAGACGTGGCCTTGTTCCTGCTTTCAAGGAA ATTAATGAAAGGCTTGGGCCAGTAAACCCGAGGAAGTTTGCGAGGCTTGCTTTGCTGTCA AATGAAAAGAGGGAAAAAGTTATTCAAGCTGACATCGAGGGGAGAAGGGAAAAGTTAGCC AAGTTGAGGAGTACTGCTGTCACAAAGAGGAGGAATACAAAAAACTTCAGGATGAACAAA TTTGTCAGG