Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g096670.3.1
CDS Infomation

Protein phosphatase 2C (AHRD V3.3 *** Q8RVG0_TOBAC)
Sequence

ATGTCTTTTGGCGAGACTAGAACTATAGCTCCAACCGAACCGAGTACGGAAGCTGCAAGA
AGGAGACGCATGGAAATTCATCAGTTTCGATTTGTTGCCAGCGATATGGCGGTGGCTCCA
CCGAGTAGTATGGAGAATGGAAGGAAGAGAAAGAAATTGGAGAAAACTGTGTCCGTAAAA
AGCTATGATAGTAAAGAGAAGAAGCAATTCAAGTTGGAAAGAATTGTTTCCCTCCCACTT
TCGCTGCCGTGCACTGATGTGGGTGAAAAGAAGCTAGCAGAGAATAAAGAAACCGAAACG
AACGCTTTGGATTTGACGGAATCTGCATCTGTATCGTCGAATATTGAGCGCCAGGGAGTC
TCCGACTGTCCGAAATTCGGGATGACATCTGTATGTGGAAGGAGAAGAGATATGGAAGAT
ACGGTGTCGATCTACCCGTCGTTTCTTCAGGATAAACATGAAAAGTCCAGCATCTTACAT
TTCTTCGGTCTCTACGACGGCCACGGCTGCTCTCATGCGGCGATGAAATGTAAAGATAGA
ATGCATGAGATAGTGAAGAACGAGGTTGAGAGCGCAGGAGAAGCTACATGGAAAGAGATG
ATGATTCAGAGCTTCTCAAAAATGGACAAAGAAGTAGTTGAATATTCGAAAGGAGCTGGA
GGTACACAAACTGCGGATTGTAGATGCGAACTTCAGACGCCGCAGTGCGATGCCGTTGGA
TCCACTGCTGTCGTGGCCGTCCTAACTCCAAACAAAATCGTCGTGTCCAACTGCGGCGAT
TCTCGCGCTGTGCTCTGCAGAAACGGTGTCCCAATTCCTCTGTCCACTGACCATAAGCCT
GATCGACCCGATGAACTCAATCGGATTGAAGAAGCTGGCGGTCGTGTAATCTATTGGGAT
GGTGCGAGAGTTCTTGGAGTTTTGGCTATGTCTCGAGCAATCGGTGACAGTTACTTGAAA
CCGTATGTTACATCTGAACCGGAGGTGACCATAACGGAGAGAACAGTGGAAGACGAGTGT
TTGATATTAGCTAGCGACGGGCTATGGGATGTTGTGTCAAACGAGACAGCATGTGGTGTG
GCTCGCATGTGCTTGCGATCTGGGCAGAACTCTGACCAGGCTTGCACTGATGCATCAATC
CTCTTGACAAGGCTGGCTTTGGCTCGGCACAGTTCGGATAATGTTAGCGTTGTCGTTGTT
GATTTGAAAAGAGGTCTATAG

Peptide Sequence

PEP ID

Solyc03g096670.3.1
PEP Infomation

Protein phosphatase 2C (AHRD V3.3 *** Q8RVG0_TOBAC)
Sequence

MSFGETRTIAPTEPSTEAARRRRMEIHQFRFVASDMAVAPPSSMENGRKRKKLEKTVSVK
SYDSKEKKQFKLERIVSLPLSLPCTDVGEKKLAENKETETNALDLTESASVSSNIERQGV
SDCPKFGMTSVCGRRRDMEDTVSIYPSFLQDKHEKSSILHFFGLYDGHGCSHAAMKCKDR
MHEIVKNEVESAGEATWKEMMIQSFSKMDKEVVEYSKGAGGTQTADCRCELQTPQCDAVG
STAVVAVLTPNKIVVSNCGDSRAVLCRNGVPIPLSTDHKPDRPDELNRIEEAGGRVIYWD
GARVLGVLAMSRAIGDSYLKPYVTSEPEVTITERTVEDECLILASDGLWDVVSNETACGV
ARMCLRSGQNSDQACTDASILLTRLALARHSSDNVSVVVVDLKRGL*

Transcript Sequence

Transcript ID

Solyc03g096670.3.1
Transcript Infomation

Protein phosphatase 2C (AHRD V3.3 *** Q8RVG0_TOBAC)
Sequence

TGAATCCTTACATTTCTTATTCATCTACGTATTGTTTCCTTGGAATTTATCAGTTGTTCA
ATTCGGCCAAGTTTTAGCGATTGATTGATCAAACAGAAGAAGAGTGAGTGTATACGATTT
TCTTTTAAGTTGCGGAATGTCTTTTGGCGAGACTAGAACTATAGCTCCAACCGAACCGAG
TACGGAAGCTGCAAGAAGGAGACGCATGGAAATTCATCAGTTTCGATTTGTTGCCAGCGA
TATGGCGGTGGCTCCACCGAGTAGTATGGAGAATGGAAGGAAGAGAAAGAAATTGGAGAA
AACTGTGTCCGTAAAAAGCTATGATAGTAAAGAGAAGAAGCAATTCAAGTTGGAAAGAAT
TGTTTCCCTCCCACTTTCGCTGCCGTGCACTGATGTGGGTGAAAAGAAGCTAGCAGAGAA
TAAAGAAACCGAAACGAACGCTTTGGATTTGACGGAATCTGCATCTGTATCGTCGAATAT
TGAGCGCCAGGGAGTCTCCGACTGTCCGAAATTCGGGATGACATCTGTATGTGGAAGGAG
AAGAGATATGGAAGATACGGTGTCGATCTACCCGTCGTTTCTTCAGGATAAACATGAAAA
GTCCAGCATCTTACATTTCTTCGGTCTCTACGACGGCCACGGCTGCTCTCATGCGGCGAT
GAAATGTAAAGATAGAATGCATGAGATAGTGAAGAACGAGGTTGAGAGCGCAGGAGAAGC
TACATGGAAAGAGATGATGATTCAGAGCTTCTCAAAAATGGACAAAGAAGTAGTTGAATA
TTCGAAAGGAGCTGGAGGTACACAAACTGCGGATTGTAGATGCGAACTTCAGACGCCGCA
GTGCGATGCCGTTGGATCCACTGCTGTCGTGGCCGTCCTAACTCCAAACAAAATCGTCGT
GTCCAACTGCGGCGATTCTCGCGCTGTGCTCTGCAGAAACGGTGTCCCAATTCCTCTGTC
CACTGACCATAAGCCTGATCGACCCGATGAACTCAATCGGATTGAAGAAGCTGGCGGTCG
TGTAATCTATTGGGATGGTGCGAGAGTTCTTGGAGTTTTGGCTATGTCTCGAGCAATCGG
TGACAGTTACTTGAAACCGTATGTTACATCTGAACCGGAGGTGACCATAACGGAGAGAAC
AGTGGAAGACGAGTGTTTGATATTAGCTAGCGACGGGCTATGGGATGTTGTGTCAAACGA
GACAGCATGTGGTGTGGCTCGCATGTGCTTGCGATCTGGGCAGAACTCTGACCAGGCTTG
CACTGATGCATCAATCCTCTTGACAAGGCTGGCTTTGGCTCGGCACAGTTCGGATAATGT
TAGCGTTGTCGTTGTTGATTTGAAAAGAGGTCTATAGGGGATTATTAATTTATATGTTTT
GCATGTACATGTACTTGTTTCAATTTTAGAGCTAGCCAAACAATATGATTTTCATTTATC
ATAGGCAAGATTTTTCGCGGTTGGTTCCTGCGATGCAATGCAATGCAACTCTCCTAATGA
AAGAGAAACTGCTTGAGCTGGAGAGCCTCTGTTGTATTACTAAGTTGGTGTTCTGGACAT
TCGAAACAGATAGCCTACTTTTGATTTTTGCAGGCTTTGTTTTCTGCTCAATTGGATTGT
TTTTATTGTTTAAAAGTTTTTGCACATTTATTGGAGAAGAAACTTCTACGAGTTAATTCC
TT