Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g095960.1.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RF13_RICCO)
Sequence	ATGCTAGCACTTCGCAAGCTCTCGACCCTAAAATCATCAAGATTTCTCTCTTCTCTCGCT ATTCAAAACCCTATCTGCAGTTCCTTAACCATCCTAGACGTTCCCAGTTGCACCAACTAC GATGAACGCATCAACAAAGCTGGCCGTGAAGGAGATTTCACCACTGTCCACCAACTTCTT AACAAGCGCGCGCGCGATGGCTTCTTCAACACGAACAATACGTTCAAGTTCATTTACACC ACTAATGTGTCCATACTCGATGATCTATTGGAAATTATAGCTCGGTTAGATAATGGTTTC CCGAGAAAGAGCTCCTACGACTGTCTCATTGCCCGTCTCTCGAAGATGCACTGCATTTCG GAGGCTATGCGTGTTGCCAAAGCTATGGTGAGCAAAGGTCACGAAGTGAACAATGTCACG TTTCATCCCATAGTTAATGCTCTGACGAAGAAGGAGGAATTCGAAGAAGCCTGGCGAGTG GTGGCGGTGATGAAATCCTGCGGGATTTCTCCTGATTTGACGACGTATAATTTTCTGTTG ACAGGTTATTGTTTTGCCGGAAATGTGGCATCAGCTGCTGGTGTTCTAGCAAAGATAGAG GAGGAGGAGCTGGGGGCGGATACGAGGACTTACGACGCCCTGGTTTTAGGCGCCTGTAGA GCAGGGAAACTGGATGCTGCTTTGGCAGTGGTGAGGAGGATGCTAGATGACGGAGTTCCG CCATTGTATAGCACACACGCCCATATTATCCGAGCATTATTGAAGTATAATTATTATGAA CAGGCGGTAGAGTTTGTTAGGAGCTATGCAGGAAGAGACGCCAAATTGGATGCAGAAAAT TTTGGAATACTGGCCACCAGATTGATCACTCGGAGTAAATTGGAGGAAGCTAAGAAACTG GTTAAAGAGATGAGTGAAAGGAGATTGGTAATGGGTCCGAGATTGAAAGATTTCTATGAA TTGTACGTTAGATCTGATGGTTTGAGATAA

Peptide Sequence

PEP ID	Solyc03g095960.1.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RF13_RICCO)
Sequence	MLALRKLSTLKSSRFLSSLAIQNPICSSLTILDVPSCTNYDERINKAGREGDFTTVHQLL NKRARDGFFNTNNTFKFIYTTNVSILDDLLEIIARLDNGFPRKSSYDCLIARLSKMHCIS EAMRVAKAMVSKGHEVNNVTFHPIVNALTKKEEFEEAWRVVAVMKSCGISPDLTTYNFLL TGYCFAGNVASAAGVLAKIEEEELGADTRTYDALVLGACRAGKLDAALAVVRRMLDDGVP PLYSTHAHIIRALLKYNYYEQAVEFVRSYAGRDAKLDAENFGILATRLITRSKLEEAKKL VKEMSERRLVMGPRLKDFYELYVRSDGLR*

Transcript Sequence

Transcript ID	Solyc03g095960.1.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RF13_RICCO)
Sequence	ATGCTAGCACTTCGCAAGCTCTCGACCCTAAAATCATCAAGATTTCTCTCTTCTCTCGCT ATTCAAAACCCTATCTGCAGTTCCTTAACCATCCTAGACGTTCCCAGTTGCACCAACTAC GATGAACGCATCAACAAAGCTGGCCGTGAAGGAGATTTCACCACTGTCCACCAACTTCTT AACAAGCGCGCGCGCGATGGCTTCTTCAACACGAACAATACGTTCAAGTTCATTTACACC ACTAATGTGTCCATACTCGATGATCTATTGGAAATTATAGCTCGGTTAGATAATGGTTTC CCGAGAAAGAGCTCCTACGACTGTCTCATTGCCCGTCTCTCGAAGATGCACTGCATTTCG GAGGCTATGCGTGTTGCCAAAGCTATGGTGAGCAAAGGTCACGAAGTGAACAATGTCACG TTTCATCCCATAGTTAATGCTCTGACGAAGAAGGAGGAATTCGAAGAAGCCTGGCGAGTG GTGGCGGTGATGAAATCCTGCGGGATTTCTCCTGATTTGACGACGTATAATTTTCTGTTG ACAGGTTATTGTTTTGCCGGAAATGTGGCATCAGCTGCTGGTGTTCTAGCAAAGATAGAG GAGGAGGAGCTGGGGGCGGATACGAGGACTTACGACGCCCTGGTTTTAGGCGCCTGTAGA GCAGGGAAACTGGATGCTGCTTTGGCAGTGGTGAGGAGGATGCTAGATGACGGAGTTCCG CCATTGTATAGCACACACGCCCATATTATCCGAGCATTATTGAAGTATAATTATTATGAA CAGGCGGTAGAGTTTGTTAGGAGCTATGCAGGAAGAGACGCCAAATTGGATGCAGAAAAT TTTGGAATACTGGCCACCAGATTGATCACTCGGAGTAAATTGGAGGAAGCTAAGAAACTG GTTAAAGAGATGAGTGAAAGGAGATTGGTAATGGGTCCGAGATTGAAAGATTTCTATGAA TTGTACGTTAGATCTGATGGTTTGAGATAA