Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g083910.4.1
CDS Infomation

symbol=TIV1
Sequence

ATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACATTACTCCCGGAT
CAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATTTTCCTCTCCGTT
TTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAA
ATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAA
ACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCCAATGCTATGCTT
AGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAAT
GGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCT
ATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCTAC
TTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTCTGGACAGGGTCC
GCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACTGATGATTAT
GTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGG
GTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACTTT
AGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTGTTAACAATCGGG
TCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAACTTCACAAGCTTT
AAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGAC
TTTTACCCGGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGGGT
GTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCATTATGCTATTGGT
ACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTGGATTGTGGAATT
GGGTTGAGACTAGACTATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAA
GAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGCAG
AAGGGATGGGCATCTGTACAGAGTATTCCAAGGACAGTGCTTTACGACAAGAAGACAGGG
ACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGTGGGTGATCCTACT
GTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCA
GAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAA
GCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGCAGAGGCATTTTG
GGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTAACGCCAGTTTAC
TTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACT
AGATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTACCTGTGTTG
GACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTGGAGAGCTTTGCT
CAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCA
GCACGACTCTTTGTTTTCAACAATGCCACAGGGGCTAGCGTTACTGCCTCCGTCAAGATT
TGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGACTTGTAA

Peptide Sequence

PEP ID

Solyc03g083910.4.1
PEP Infomation

symbol=TIV1
Sequence

MATQCYDPENSASRYTLLPDQPDSGHRKSLKIISGIFLSVFLLLSVAFFPILNNQSPDLQ
IDSRSPAPPSRGVSQGVSDKTFRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWMNDPN
GPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVWTGS
ATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVKDF
RDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGVLHAVPGTGMWECVD
FYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPELDCGI
GLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDKKTG
THLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGIIE
ADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSELTPVYFYISKGADGRAETHFCADQT
RSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAVNGA
ARLFVFNNATGASVTASVKIWSLESANIQSFPLQDL*

Transcript Sequence

Transcript ID

Solyc03g083910.4.1
Transcript Infomation

symbol=TIV1
Sequence

AATCCCAAGTGTACCTCAAATTATAAAAGTCCTTTTGTTACTCAATTTCGTTGGTCCCAG
TCATTTTCTGTGTTCATCACCTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCT
CTATCTTCTATTATGGCCACTCAGTGTTATGACCCCGAAAACTCCGCCTCTCGTTACACA
TTACTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATT
TTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCA
CCGGACTTGCAAATCGACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGA
GTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTCACGTTTCTTATGCGTGGTCC
AATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATG
AACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAAT
CCAGATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATC
CACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTATGATATTAACGGTGTC
TGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGAC
ACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATCTGATCCTCTC
CTTCTAGACTGGGTCAAGTTCAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGT
GTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGACCACAAAATGGGCAATGGCTG
TTAACAATCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAAC
TTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGG
GAGTGTGTGGACTTTTACCCGGTATCTACTAAAAAAACAAACGGGTTGGACACATCATAT
AACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCAT
TATGCTATTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTG
GATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAAGACTTTTTAT
GACCCGAAGAAAGAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCT
GCTGACCTGCAGAAGGGATGGGCATCTGTACAGAGTATTCCAAGGACAGTGCTTTACGAC
AAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGTG
GGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTT
GACTCAGCTGCAGAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAG
GGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTACTAGTGGAGGTGCTGCTAGC
AGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTA
ACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGT
GCTGATCAAACTAGATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCA
GTACCTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTG
GAGAGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCA
GTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACAGGGGCTAGCGTTACTGCC
TCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGACTTG
TAATCTTCTTTATTTCGTTTTTTTTCTTTTTCATTTGAAGGTTATTTCACCGACGTCCCA
TCAAGAAAGGGAAGAGGGAGATCAATATATGTAGTGTTATTCGCCCTACCTTAGGATTAG
ATGTCATCTAGCAATGTCAAATCTAGTAGAGTATACAATGTATGGGTTCCTGGAAACCGA
GTAGAGCTTACCTGGATTCTATGTAAACTAAGAAAGCTCAGCAAATATATGCACAAATAA
TTTACAGAAACAACTTGGGAATGTTGACAAACTTGA