Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g083900.3.1
CDS Infomation

Monocopper oxidase-like protein SKU5 (AHRD V3.3 *** SKU5_ARATH)
Sequence

ATGGCTTCTTCTTCTCTACTTGTGCATCGTCTCTGCTGCATTGCTCTGTTTTTCACACTA
TGCTTTGCCGCTGACCCTTTTGCTAATTTTGAATTGGAGTACTCTTATATCACCGCTTCT
CCTCTTGGCGTTCCCCAACAGGTTGTAGCTGTGAATGGGAAATTTCCAGGTCCCATCCTT
AATGTTACAACTAATTATAATGTTGTGGTGGATGTGAAGAACAAATTGGATGAAGAACTT
CTTGTCACTTGGTCTGGAATTCAGATGCGACGCACTTCCTGGCAAGATGGTGTTCTTGGT
GGACGGAACTTCACTTACCAGTTTCAAGTAAAGGATCAGATTGGTAGCTTTTTCTATGCT
CCTTCCATCAACATGCAGAGGGCAGCTGGTGGTTTTGGTTCTTTTATTGTTACGAACCGT
AATATTATCCCTATTCCCTTTAGTCCTCCTGATGGAGATATAGTGATAATTATTGGCGAT
TGGTACACCCAGAGCCATAAGTCTCTGAGGAAGGACCTTGATGATGGGAAGCAATTGGGG
ATGCCAGATGGAGTACTCATTAATGGGAAAGGCCCGTACAGATACAACACAACACTTGTA
CCTGATGGGATTGACCATGAAACCATAAATGTTGATCCAGGTAATACCTATCGGGTTCGG
GTGCACAATGTTGGAGTCTCCACTTGTTTGAATTTTAGGATTCAAAATCATAATTTACTC
TTGGTGGAGACGGAGGGATATTACACTTCACAGCAAAATTATACTAGTGTAGATATTCAT
GTTGGGCAGTCGTACACATTTTTGGTTACCATGGATCAGAATGCAAGTAGTGATTACTAC
ATTGTGGCGAGTTCTAGGTTTGTAAATCAAACAATCTGGCAAAAAGTAACTGGTGTTGGT
ATTTTGCATTATTCCAACTCCAAAGGAAAGGCAGCTGGACCCCTTCCAGACCCTCCAAAT
GATGTATATGACACATCGTATGCGCTGAATCAGGCCATGTCCATAAGGCAAAATGTTTCT
GCAAGTGGAGCTCGACCGAATCCTCAAGGATCTTTCCACTATGGTCAAATTAATGTCACA
GATTTTTATTTGCTAAAGAGTGTGCCACCAGTGTCAATTGATGGAAAGCTTCGAGCTACC
TTTAATGGGATTTCATTCAAAAATCCTGCTACTCCAATTAGGCTTGCTGATCTGTACTAT
GTGAAGGGTGACTACAAGCTTGATTTCCCAACTAAGCCAATGAACAGACCACCCAAGGTG
GACACGTCCATTATCAATGCCACATACAAGGGATTTATAGAAATCGTATTGCAGAACAAT
GACACTGTAGTCCAGAGCTTTCACATGGATGGTTACTCATTCTTTGTTGTTGGGATGGGC
TTTGGAGAGTGGACAGAGAACAACAGGGGATCTTATAATAGATGGGATGCAATTTCCCGG
TCTACGACTCAGGTTTTTCCTGGAGGATGGACAGCAGTTTTGGTATCTCTCGACAATGTA
GGGGTGTGGAACCTCAGAGCAGAAAACCTGGACAGGTGGTACTTAGGGCAGGAAACGTAT
ATGAGAATTATCAATCCTGAAGATCATAGCAACAAAACAGAAATGCAAAAGCCTGACAAT
GCTCTGTACTGTGGTGCCCTTGCTTATATGCAAAAGTATGATTTCATCTCTTTGCTTCTG
TTACACATAGTTTTGGAAACAGAAAGTATCTTCAGCGACAACCCTATTTGGAAGCTCGGG
GTTATATTTTACATTGTTGTTGGTACTCTCTACTGTCATCAGTCTTGTATACTAGTGTAC
CACTTCAGTTGGTGA

Peptide Sequence

PEP ID

Solyc03g083900.3.1
PEP Infomation

Monocopper oxidase-like protein SKU5 (AHRD V3.3 *** SKU5_ARATH)
Sequence

MASSSLLVHRLCCIALFFTLCFAADPFANFELEYSYITASPLGVPQQVVAVNGKFPGPIL
NVTTNYNVVVDVKNKLDEELLVTWSGIQMRRTSWQDGVLGGRNFTYQFQVKDQIGSFFYA
PSINMQRAAGGFGSFIVTNRNIIPIPFSPPDGDIVIIIGDWYTQSHKSLRKDLDDGKQLG
MPDGVLINGKGPYRYNTTLVPDGIDHETINVDPGNTYRVRVHNVGVSTCLNFRIQNHNLL
LVETEGYYTSQQNYTSVDIHVGQSYTFLVTMDQNASSDYYIVASSRFVNQTIWQKVTGVG
ILHYSNSKGKAAGPLPDPPNDVYDTSYALNQAMSIRQNVSASGARPNPQGSFHYGQINVT
DFYLLKSVPPVSIDGKLRATFNGISFKNPATPIRLADLYYVKGDYKLDFPTKPMNRPPKV
DTSIINATYKGFIEIVLQNNDTVVQSFHMDGYSFFVVGMGFGEWTENNRGSYNRWDAISR
STTQVFPGGWTAVLVSLDNVGVWNLRAENLDRWYLGQETYMRIINPEDHSNKTEMQKPDN
ALYCGALAYMQKYDFISLLLLHIVLETESIFSDNPIWKLGVIFYIVVGTLYCHQSCILVY
HFSW*

Transcript Sequence

Transcript ID

Solyc03g083900.3.1
Transcript Infomation

Monocopper oxidase-like protein SKU5 (AHRD V3.3 *** SKU5_ARATH)
Sequence

AAGAGGTTTTAAAAAGACTCTGTTGCTTCTTTCCTCTCTGCTTCTCTCTTCACACTATTA
TCACTCTCATGTAAAGTCTGTTTTCACATACAACAAATCTCTCCCTCTGTAAAATTTTAC
CATTGAGTCATCAATGGCTTCTTCTTCTCTACTTGTGCATCGTCTCTGCTGCATTGCTCT
GTTTTTCACACTATGCTTTGCCGCTGACCCTTTTGCTAATTTTGAATTGGAGTACTCTTA
TATCACCGCTTCTCCTCTTGGCGTTCCCCAACAGGTTGTAGCTGTGAATGGGAAATTTCC
AGGTCCCATCCTTAATGTTACAACTAATTATAATGTTGTGGTGGATGTGAAGAACAAATT
GGATGAAGAACTTCTTGTCACTTGGTCTGGAATTCAGATGCGACGCACTTCCTGGCAAGA
TGGTGTTCTTGGTGGACGGAACTTCACTTACCAGTTTCAAGTAAAGGATCAGATTGGTAG
CTTTTTCTATGCTCCTTCCATCAACATGCAGAGGGCAGCTGGTGGTTTTGGTTCTTTTAT
TGTTACGAACCGTAATATTATCCCTATTCCCTTTAGTCCTCCTGATGGAGATATAGTGAT
AATTATTGGCGATTGGTACACCCAGAGCCATAAGTCTCTGAGGAAGGACCTTGATGATGG
GAAGCAATTGGGGATGCCAGATGGAGTACTCATTAATGGGAAAGGCCCGTACAGATACAA
CACAACACTTGTACCTGATGGGATTGACCATGAAACCATAAATGTTGATCCAGGTAATAC
CTATCGGGTTCGGGTGCACAATGTTGGAGTCTCCACTTGTTTGAATTTTAGGATTCAAAA
TCATAATTTACTCTTGGTGGAGACGGAGGGATATTACACTTCACAGCAAAATTATACTAG
TGTAGATATTCATGTTGGGCAGTCGTACACATTTTTGGTTACCATGGATCAGAATGCAAG
TAGTGATTACTACATTGTGGCGAGTTCTAGGTTTGTAAATCAAACAATCTGGCAAAAAGT
AACTGGTGTTGGTATTTTGCATTATTCCAACTCCAAAGGAAAGGCAGCTGGACCCCTTCC
AGACCCTCCAAATGATGTATATGACACATCGTATGCGCTGAATCAGGCCATGTCCATAAG
GCAAAATGTTTCTGCAAGTGGAGCTCGACCGAATCCTCAAGGATCTTTCCACTATGGTCA
AATTAATGTCACAGATTTTTATTTGCTAAAGAGTGTGCCACCAGTGTCAATTGATGGAAA
GCTTCGAGCTACCTTTAATGGGATTTCATTCAAAAATCCTGCTACTCCAATTAGGCTTGC
TGATCTGTACTATGTGAAGGGTGACTACAAGCTTGATTTCCCAACTAAGCCAATGAACAG
ACCACCCAAGGTGGACACGTCCATTATCAATGCCACATACAAGGGATTTATAGAAATCGT
ATTGCAGAACAATGACACTGTAGTCCAGAGCTTTCACATGGATGGTTACTCATTCTTTGT
TGTTGGGATGGGCTTTGGAGAGTGGACAGAGAACAACAGGGGATCTTATAATAGATGGGA
TGCAATTTCCCGGTCTACGACTCAGGTTTTTCCTGGAGGATGGACAGCAGTTTTGGTATC
TCTCGACAATGTAGGGGTGTGGAACCTCAGAGCAGAAAACCTGGACAGGTGGTACTTAGG
GCAGGAAACGTATATGAGAATTATCAATCCTGAAGATCATAGCAACAAAACAGAAATGCA
AAAGCCTGACAATGCTCTGTACTGTGGTGCCCTTGCTTATATGCAAAAGTATGATTTCAT
CTCTTTGCTTCTGTTACACATAGTTTTGGAAACAGAAAGTATCTTCAGCGACAACCCTAT
TTGGAAGCTCGGGGTTATATTTTACATTGTTGTTGGTACTCTCTACTGTCATCAGTCTTG
TATACTAGTGTACCACTTCAGTTGGTGATAATATTTGGGAATTCACTTTCTTGTAGGATG
ATGAGCTGATAGGATTAATGTTTCTTATTCTTTTACTTTGAGAAAGTTCATTAACGATAG
TTTGCACAGTTTCCCGTCTATTTCATTTGTTCCCGAAAAAAAATTTGTGAAGTATGAGAA
GACAACTTACTGACGGCATACAACTTTCTTCCAGTTTTAGTTTCTTCA