Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g083580.3.1
CDS Infomation

Mitochondrial intermediate peptidase, putative (AHRD V3.3 *** B9R9Q2_RICCO)
Sequence

ATGCACGCTCTAATTCGCAAGTCCGCCGTTGCTCATGTACGAGCCAACTCCAACTTCATC
CACATTTCAACATCTAAAGCTCCCTCAATCAAAGAGACGGGCCTCTACGGCTTTCATCAT
TTGAAAACTCCCAAAGGCTTCCAACGATTTGTTGATGATGCTGTTGAGAGGTCACAAGAA
CTTGTGAACTATATCGCTGGCATGCCCTCATCTCCCGAAATTATCCGTGCAATGGATGAG
ATTTCTGATACTGTGTGCTCAGTAATTGATTCAGCTGAATTGTGCAGACATACTCATCCA
GACAGGGAGTTTGTTAATGAGGCAAGCAAGGCATCCTTGAGAGTAAATGAGTTTTTACAC
TATCTTAATACAAACCATAGTATATACAAGGCAGTGAACAAAGCAGAAAAAGATAGCAAT
TCTCTCACACATGAAGCGCATAGGGCTGCCCATTTTCTACGAATGGACTTGGAGAAGGGT
GGAATCCATCTTTGCTCTGAAAAACTGGATCGAGCTAATGAGCTTGCCATTGACATTATT
CAGTTGTCTAGGGAGTATAATGAAAATATTATTACTGACCCTGGCCATGTGGATATATTT
CCAGCTTCTAAGATCCCTAAAAAATTGCACCACCTTGTCAGCCCTATCCATCGTAACCTG
CCAGGTTCATCTAAGGGATCTTGGGGGTTAAGAGATAAAACCAAAGAAAAGGGATTTCGC
TTAGCAACTGAGTCAAGTACTCTGCAAGGCTTTCTTCAATGTGCACCAGATGCTGGGGTC
AGGAAGGTGGCATATGTTCAAGGAAATTCTGTTCCACATGCAAACCTTGAGGTTCTTGAT
AAGCTTATTGCAACTAGACACGAATTTGCACAGCTTATGGGGCATAAATCTTATGCTGAA
TTTGCTCTGCATTCTACTATGGCTGCATCTCCTGAAGTGGTCATGTCCTTTTTGCTTGAG
ATGAGCAAAGTGGTCAGACCCAAGGCTGATCAAGAATTTGAGGCGATTCAGGATTTCAAG
AGAGAGAATAGTGGTGATCAAAATGGAGGGTTGGATCCATGGGATGAGGCGTACTTCACG
TGGTTGATGAAGTCTGCAAAATACAAGTTGGACTCCTCGGTTATAGCATCATATTTTCCT
TTACAACAGTGTATTGAAGGTTTGAAGGTTTTGGTTGAGTCACTATTTGGTGTGACCTTT
CATGGAGTACCCCTTGCACCTGGTGAATCATGGCATCCTGATGTGATGAAGATAGTGTTA
CATCATCCTACTGAGGGAGACCTGGGGTACTTATACCTCGATCTAAAATCAAGAAAAGGT
AAACATCCCATCTGTGCTCATTTTGCTATCCGAGGAGGGCGGCGAGTTTCTGAGACAGAA
TACCAACTTCCTGTTGTAGCGCTTGTTTGCAATTTCTCTGGGTCGAGTTTGGCGCCGGTG
AGGCTTAACCATTCTGAAGTAGAAACACTTTTCCATGAGTTTGGGCATGCTCTACATTCG
TTGCTCTCAAGAACGGAATACCAACACTTTTCCGGTACGAGGGTGGTTCTTGATTTTGCT
GAAACGCCTTCAAACCTATTTGAGTCCTATGCCTGGGATTATCGGGTGTTAAAGACATTT
GCTAAACACTACTCAACTGGTGATATTATTCCCAAAGAACTTGTAGAATCAATGGTGGGA
GCTAAAAAGATGTTTGCTGCAACAGAATTGCAACGCCAGATTCTCTATGCACTAGTTGAT
CAAACACTCTTTGGGGAGCAGCCATCCACGGGGATAGATACGATGGCAATTGTTGCAGAT
TTAAAAAGACAACATACAAGTTGGACTCATGTGGATGGAACACATTGGCATACCCGATTC
AGTCACCTTACAAACTATGGCGCAGGTTATTATAGCTACTTGTATGCAAAATGCTTTGCC
ACGAGTATCTGGCAAAGGATGTGCCAAGAGGATCCTTTATCATTGGACACTGGTTTGGCT
TTAAGAACAAAATTCTTGCAGCATGGAGGAGCCAAAGATCCAGCTGATATACTGAATGAT
CTTGCTGGGAGTGGCACTGTAAGGAGTTGCCATGGGGGAATAATACCAGACATTACAAGC
CTTTGCAAGGAAATGGAACTCTTGAAATGCTAA

Peptide Sequence

PEP ID

Solyc03g083580.3.1
PEP Infomation

Mitochondrial intermediate peptidase, putative (AHRD V3.3 *** B9R9Q2_RICCO)
Sequence

MHALIRKSAVAHVRANSNFIHISTSKAPSIKETGLYGFHHLKTPKGFQRFVDDAVERSQE
LVNYIAGMPSSPEIIRAMDEISDTVCSVIDSAELCRHTHPDREFVNEASKASLRVNEFLH
YLNTNHSIYKAVNKAEKDSNSLTHEAHRAAHFLRMDLEKGGIHLCSEKLDRANELAIDII
QLSREYNENIITDPGHVDIFPASKIPKKLHHLVSPIHRNLPGSSKGSWGLRDKTKEKGFR
LATESSTLQGFLQCAPDAGVRKVAYVQGNSVPHANLEVLDKLIATRHEFAQLMGHKSYAE
FALHSTMAASPEVVMSFLLEMSKVVRPKADQEFEAIQDFKRENSGDQNGGLDPWDEAYFT
WLMKSAKYKLDSSVIASYFPLQQCIEGLKVLVESLFGVTFHGVPLAPGESWHPDVMKIVL
HHPTEGDLGYLYLDLKSRKGKHPICAHFAIRGGRRVSETEYQLPVVALVCNFSGSSLAPV
RLNHSEVETLFHEFGHALHSLLSRTEYQHFSGTRVVLDFAETPSNLFESYAWDYRVLKTF
AKHYSTGDIIPKELVESMVGAKKMFAATELQRQILYALVDQTLFGEQPSTGIDTMAIVAD
LKRQHTSWTHVDGTHWHTRFSHLTNYGAGYYSYLYAKCFATSIWQRMCQEDPLSLDTGLA
LRTKFLQHGGAKDPADILNDLAGSGTVRSCHGGIIPDITSLCKEMELLKC*

Transcript Sequence

Transcript ID

Solyc03g083580.3.1
Transcript Infomation

Mitochondrial intermediate peptidase, putative (AHRD V3.3 *** B9R9Q2_RICCO)
Sequence

ACGACCCCAACCACACCTCTGTACCTAATAAACCTTAACCATAATCTCAAACTAGGTCGA
GACCCGACTAACTTGACCACACGTTGAGACTGGATTTGGAATACGAGTTGTGTCCTAGGT
TGAGTTGGAGGCGAGGTCAGGAGTCTGAGTTCTGATTGAGGGTTGGGAGTTGAATTTCAA
GTCTGAATTGGATTTGAAAAATAATTTCCTTTTTTTTTTTTTAATATAGGAAAGTCACTT
TCTTTCCTTGAATTGAATTGGAGGGGAAGAAGACCATTTGGAACTCTGGTAGGTATGCTT
CCTTACTTTTTTTAAGTTTAAAATGTGTAGTAATATAAAAAGGGGCATTTTTGTCATTTT
CGGTCAAAATTGTTATTAGACCTTCTGCGAGAACGCTTTATCAAGCCGATAAACGCCATT
TCTCACCGGACTTCTTTCCCCGGTTTCCAGTTTCCAGTTTCTACTACTTGGACACCGATT
ACAGCCGGCCCCTTCTGCAGATTGAGCGAAGAAGAGGAGCAGAACCTCGTTGTTTAGAGT
TCGCAGTTTCGTCTACGGCGAACGCCAGTCGTCATGCACGCTCTAATTCGCAAGTCCGCC
GTTGCTCATGTACGAGCCAACTCCAACTTCATCCACATTTCAACATCTAAAGCTCCCTCA
ATCAAAGAGACGGGCCTCTACGGCTTTCATCATTTGAAAACTCCCAAAGGCTTCCAACGA
TTTGTTGATGATGCTGTTGAGAGGTCACAAGAACTTGTGAACTATATCGCTGGCATGCCC
TCATCTCCCGAAATTATCCGTGCAATGGATGAGATTTCTGATACTGTGTGCTCAGTAATT
GATTCAGCTGAATTGTGCAGACATACTCATCCAGACAGGGAGTTTGTTAATGAGGCAAGC
AAGGCATCCTTGAGAGTAAATGAGTTTTTACACTATCTTAATACAAACCATAGTATATAC
AAGGCAGTGAACAAAGCAGAAAAAGATAGCAATTCTCTCACACATGAAGCGCATAGGGCT
GCCCATTTTCTACGAATGGACTTGGAGAAGGGTGGAATCCATCTTTGCTCTGAAAAACTG
GATCGAGCTAATGAGCTTGCCATTGACATTATTCAGTTGTCTAGGGAGTATAATGAAAAT
ATTATTACTGACCCTGGCCATGTGGATATATTTCCAGCTTCTAAGATCCCTAAAAAATTG
CACCACCTTGTCAGCCCTATCCATCGTAACCTGCCAGGTTCATCTAAGGGATCTTGGGGG
TTAAGAGATAAAACCAAAGAAAAGGGATTTCGCTTAGCAACTGAGTCAAGTACTCTGCAA
GGCTTTCTTCAATGTGCACCAGATGCTGGGGTCAGGAAGGTGGCATATGTTCAAGGAAAT
TCTGTTCCACATGCAAACCTTGAGGTTCTTGATAAGCTTATTGCAACTAGACACGAATTT
GCACAGCTTATGGGGCATAAATCTTATGCTGAATTTGCTCTGCATTCTACTATGGCTGCA
TCTCCTGAAGTGGTCATGTCCTTTTTGCTTGAGATGAGCAAAGTGGTCAGACCCAAGGCT
GATCAAGAATTTGAGGCGATTCAGGATTTCAAGAGAGAGAATAGTGGTGATCAAAATGGA
GGGTTGGATCCATGGGATGAGGCGTACTTCACGTGGTTGATGAAGTCTGCAAAATACAAG
TTGGACTCCTCGGTTATAGCATCATATTTTCCTTTACAACAGTGTATTGAAGGTTTGAAG
GTTTTGGTTGAGTCACTATTTGGTGTGACCTTTCATGGAGTACCCCTTGCACCTGGTGAA
TCATGGCATCCTGATGTGATGAAGATAGTGTTACATCATCCTACTGAGGGAGACCTGGGG
TACTTATACCTCGATCTAAAATCAAGAAAAGGTAAACATCCCATCTGTGCTCATTTTGCT
ATCCGAGGAGGGCGGCGAGTTTCTGAGACAGAATACCAACTTCCTGTTGTAGCGCTTGTT
TGCAATTTCTCTGGGTCGAGTTTGGCGCCGGTGAGGCTTAACCATTCTGAAGTAGAAACA
CTTTTCCATGAGTTTGGGCATGCTCTACATTCGTTGCTCTCAAGAACGGAATACCAACAC
TTTTCCGGTACGAGGGTGGTTCTTGATTTTGCTGAAACGCCTTCAAACCTATTTGAGTCC
TATGCCTGGGATTATCGGGTGTTAAAGACATTTGCTAAACACTACTCAACTGGTGATATT
ATTCCCAAAGAACTTGTAGAATCAATGGTGGGAGCTAAAAAGATGTTTGCTGCAACAGAA
TTGCAACGCCAGATTCTCTATGCACTAGTTGATCAAACACTCTTTGGGGAGCAGCCATCC
ACGGGGATAGATACGATGGCAATTGTTGCAGATTTAAAAAGACAACATACAAGTTGGACT
CATGTGGATGGAACACATTGGCATACCCGATTCAGTCACCTTACAAACTATGGCGCAGGT
TATTATAGCTACTTGTATGCAAAATGCTTTGCCACGAGTATCTGGCAAAGGATGTGCCAA
GAGGATCCTTTATCATTGGACACTGGTTTGGCTTTAAGAACAAAATTCTTGCAGCATGGA
GGAGCCAAAGATCCAGCTGATATACTGAATGATCTTGCTGGGAGTGGCACTGTAAGGAGT
TGCCATGGGGGAATAATACCAGACATTACAAGCCTTTGCAAGGAAATGGAACTCTTGAAA
TGCTAAAAGGAGTTCTAAGCCCCGCATTGAGAAGACGTATTCCCTCCCCTGTACTAAACC
ATGACGAGGCCAAGTAGTTGTGCACGCAGATAGCAGCCCACCATTGAAGAGTTGGAAGCT
TTCCATCGTAATAACAACTAAATAGCGCTGATATGGTGATTTCATCATGGCCAGCATGTC
ATTCTTTAAGATGGCGTTCAGAGAACATCTCATGGCCAGAGTATTTATTGAGCAATTCTT
CGGAGAGACTACTTATGTGTATTTTGATTGATTTTTGCTTAATTTGGATAGTGTTTTTAT
AATCTGATAAAACTGAAGAGATGTATTGATGCTAGGAGTATAT