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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g083570.3.1
CDS Infomation

low psii accumulation2 (AHRD V3.3 *** AT5G51545.1)
Sequence

ATGGCGCTACTACTGAACTCACCACATACCAAGAGACCTCATCTTCATCTTCTCCTCCCT
CAACCACATCAACACTCCAACCCCAGAAATTTCTCCATCAAATTCCAAAACTCTTCTTCT
GATAATTCTTCAGAGGACACTGCATCATCTCCGGTAGCTAAGAAGGCAGCCAGCTCCACT
TCTTTAGGTTTTGGGTCATCGGTTTCCACCACAGTAAAGAAGAAACAACAAAAGGGGAAA
AGAGAGAGGGATACAATTATCCGACGAGAACCCATTCAAAAGCCCAGCTTAGCTACCCAA
CCGGCGGAAGAATCTGGATCCAAGGAATTTCAGAAAAATGAGAGTGCGTTTCTTCTTGCT
TGGTTAGGACTTGGTGGAATTATCCTTGTCGAGGGTATTCTTCTTGCTGCTTCAGGCCTT
TTACCAGAAGCTTGGGACAACTTTTTTGTGAAGTATCTGTATCCATCCTTTACTCCGACG
GTCTTCCTGTTTGTGGCTGGAACAGTTGGTTATGGAGTGTTGAAGTACCTGCAGAATGAG
AAATTTAATAGTGAAAACTGA

Peptide Sequence

PEP ID

Solyc03g083570.3.1
PEP Infomation

low psii accumulation2 (AHRD V3.3 *** AT5G51545.1)
Sequence

MALLLNSPHTKRPHLHLLLPQPHQHSNPRNFSIKFQNSSSDNSSEDTASSPVAKKAASST
SLGFGSSVSTTVKKKQQKGKRERDTIIRREPIQKPSLATQPAEESGSKEFQKNESAFLLA
WLGLGGIILVEGILLAASGLLPEAWDNFFVKYLYPSFTPTVFLFVAGTVGYGVLKYLQNE
KFNSEN*

Transcript Sequence

Transcript ID

Solyc03g083570.3.1
Transcript Infomation

low psii accumulation2 (AHRD V3.3 *** AT5G51545.1)
Sequence

AGTTAACAACAAAGTAAACTGAAAATGGCGCTACTACTGAACTCACCACATACCAAGAGA
CCTCATCTTCATCTTCTCCTCCCTCAACCACATCAACACTCCAACCCCAGAAATTTCTCC
ATCAAATTCCAAAACTCTTCTTCTGATAATTCTTCAGAGGACACTGCATCATCTCCGGTA
GCTAAGAAGGCAGCCAGCTCCACTTCTTTAGGTTTTGGGTCATCGGTTTCCACCACAGTA
AAGAAGAAACAACAAAAGGGGAAAAGAGAGAGGGATACAATTATCCGACGAGAACCCATT
CAAAAGCCCAGCTTAGCTACCCAACCGGCGGAAGAATCTGGATCCAAGGAATTTCAGAAA
AATGAGAGTGCGTTTCTTCTTGCTTGGTTAGGACTTGGTGGAATTATCCTTGTCGAGGGT
ATTCTTCTTGCTGCTTCAGGCCTTTTACCAGAAGCTTGGGACAACTTTTTTGTGAAGTAT
CTGTATCCATCCTTTACTCCGACGGTCTTCCTGTTTGTGGCTGGAACAGTTGGTTATGGA
GTGTTGAAGTACCTGCAGAATGAGAAATTTAATAGTGAAAACTGATGTTTTTTTGCATGT
TATATCAAATATTTAGGTAACTTTAGTTAGTTTGTTCAGTCATGTAAACTACAAATGTGA
AACTCTGACAATGTAATTCTAAGAAATACTTATGAAAGTGGATTATACCTCAGGCTAATG
TGTTATCCTGTATCTCCTTCATTCAGTAA