Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g082690.3.1
CDS Infomation	U-box domain-containing protein 43 (AHRD V3.3 *** W9S1U9_9ROSA)
Sequence	ATGCCAGAGGATCCATCTACCGATGTTTCTCTTGTCCCAGCTTCAGAAGTTGTCACTGGC ATAACTCGACTTGTATTTGAAACAATAGAGGCTGCAAATTCTGCTGTTGTGCAGAAGGAG AACTTCAATAAATTTTCAAAATTCTTGGAGAAGATTGCTTTGGTCCTGAAAGAGTTATCT AATTCTGAAACTAGTGAAATTAATAACTTAAGTCCAGCTTTAGAGGTTCTCAAGTTGGAG ATAGAAGTGATCAAACAACTAGCTTTGGACTGCAGAAATAGGAACAAAATCTATCTCTTA CTAAATTGTAGGAGAACCCTCAAGTATTTTGAGTGTAGTACGAGGGATATTAGTCGGACT TTGTTGCTAATAACTTCGGAATATCTGAATGTTTTACCTGAAATCACTGACCAGCTTAAA GATCTATGCAAGAACATGCTGGATACTGAGTATAAAGTCTCTATAGAGGAGGAAGAAGTT TCGGAGAAAATTGAATTAGGGATACAAGAGAGGAATATTGATAGATCCTATGCAAATGAT TTGCTCATTTGTATTGCTAGAGCTGTTGGAATAGCAAATGAGCAATCAGTACTGAAGAGA GAATTTGGAAATTTCAAGGCAGAAATTGCTAGTAGTGAACAAGGGAAGAACCTGACGGAG AAATTACGGATGGAAGAGATTATTCTATTGCTTGGCAAGGCTGACTTGCTTACAACTGCA GAAGAAAAACAAACAAATTATTTGACTAAAAGAAACTCTTTGGGTAGGCAACCATTAGAA CCTTTGCAGTCATTTTACTGCCCAATTACTGGAGATGTCATGGAAGATCCGGTGGAGACT TCTTCTGGGCAGATATTTGAAAGGACAGCTATCGAGAAGTGGTTAGCAGACGGCAATAAG CTGTGTCCCTTGACCAAAAAACACTTGAAAAAGTCAGATCTTCGGTCCAATAAAACCCTG CGTCAGTCAATTGAAGAATGGAAAAACAGAAACATCATGATCACCATTGCGTCTCTAAAA CTGAAAATTCAAACAGACAAAGAGGAAGAAGTGCTTCAATCTTTACAGAAGTTGTCGGAG TTTTGTGTAAGGAGTGAGTTGCAGAGAGAATGGATCGTGATGGAAAATTACGTACCAGTT ACCATAGATCTTCTACGTGCAAATAATACTGAGATAAGAAAGTATGCTTTATTGATACTT TACGCTCTCGCAAAGGATAGTGAAGAAGGCAAGGAAAGAATAGGTACAGTAGATAATGCT ATTGGTTTGGTGGTGCGATCTCTTGCACGCAAACCTGAAGAAAGCATATTGGCTTTGCAT CTGCTTTTGGAGCTATCCAGAAGTAGTGTAGTTCAGAACTTGATTGGCAATGTCCAGGGT TGCATCCTTCTACTTGTTACTTTCATGAATAGTGAGGACTCTGTAGCAGCAAAGTATGCT AGTGAAATTTTGGACAATCTCTCGTTCCTTGATCAGAATGTTATTGAGATGGCAAGATTA AATTATGGTGCACCCTTACTACAACATCTATGTTCAGGAACTGAAAGTAAGCGTATTCTC ATGGCCAAAACCTTGTCACACATCCAGTTGAGCGACCAGATTAAGCTGCACATCACAGAA AAAGGGGCACTGAAGCCACTTCTTGAACTGCTATCGCATAGCAATACAGAGATGAAAATC ATTGCTGTCAAAGCACTCCAAAGCCTTTCAACTGTCCCAAGAAATGGTCAATTGATGATA AAGGCAGGTGTCAGTGACCAGCTGTTTGAACTACTATTTTGTCACACCTTGTCAACAGAA ATACGGGAAAATGTAGCAGCAACAATTATGCAACTTGCCATATCAAAAAATTCTCAAGGA TCAGAGGATGTGCAGGTTTCATTGTTGGAGTCTCATGATGACATCTTTAAACTCTTTTCT CTTATATCGTTGACTGGATCTAATGTGCAACAAAGCATTCTTCGTATCTTTCAAGCAATG TGCCAATCTCCTGCTGGTTCTGATATCCGGACCAAACTGAGACAGATTTCTGCAATTAAG GTCCTAGTCTACCTGTGTGAGGTTGATGACCATGAGGTACGGGCTGATGCGGTGAAACTC TTCTATTTATTGGCAAAAGACGGTAATGATGATATTCTCTTAGAGCATGTAAACAATACA TGCATTGGGAACTTGGTAGGGATCATCAGAACTTCAGATAATGAAGAAGAGATTGCTGCT GCATTGGGAATAATCTCTCATCTTCCTCAAGATTTTTCAATGTCCCAGCACCTTCTTGAT GCTGGGGCACTTGATGTCATCTTAGACTGTCTGCATGGTAGAAATGCCCATTCTTCACTA AGAAATGAAATTGTAGAGAATGCTGCTGGAGCCCTTTGCCGTTTTACTGTTCCAACAAAT CCAGAAACACAAACACAAGTTGCTGAAGCCGGTATTATTCCTCTTCTAGTATCCCTTCTA GCATCAGGCAGTTGTTTAACCAAAAAAAATGCAGCTACTTCTTTAAAGCAGTTTTCAGAA AGCTCACAAAAGCTGAGCAAGCAGCCAGCTAGTAAAATTTGGATGTTTAGTTGCTGTATC GCCTCACCGACACAAAACTGTCCCGTGCACCTAGGATTTTGCAGTGTGGAATCCTCATTC TGCCTTTTAGAGGCTAATGCTCTCAGACCCCTCGCGGAGGTGGTAGATGAGCCAGATCCT GCAGCTGCTGAAGCTTCTATAGATGCAATCTTGACAATAATTGAAGGTGAGCAGCTGCAG AATGGTTCTAAGGTACTTGCAGAAGCCAACGCCATCGCTCCAATCATAAAATTGTTGAGC TCATCCTCTATCATTTTACAAGAAAAAGCTCTCAAGGCCTTGGAGAGGCTATTTCAAATG ATAGAATTGAAGCTCAAGTATGGGACATCAGCCCAGATGCCACTTGTGGAAATCACTCAG AAAGGAAGAAGTGACTTGAAATCTTTAGCTGCTAAAGTTCTATCTCACTTGAATGTGCTT CCTGAACAGTCTTCCTTTTTCTAA

Peptide Sequence

PEP ID	Solyc03g082690.3.1
PEP Infomation	U-box domain-containing protein 43 (AHRD V3.3 *** W9S1U9_9ROSA)
Sequence	MPEDPSTDVSLVPASEVVTGITRLVFETIEAANSAVVQKENFNKFSKFLEKIALVLKELS NSETSEINNLSPALEVLKLEIEVIKQLALDCRNRNKIYLLLNCRRTLKYFECSTRDISRT LLLITSEYLNVLPEITDQLKDLCKNMLDTEYKVSIEEEEVSEKIELGIQERNIDRSYAND LLICIARAVGIANEQSVLKREFGNFKAEIASSEQGKNLTEKLRMEEIILLLGKADLLTTA EEKQTNYLTKRNSLGRQPLEPLQSFYCPITGDVMEDPVETSSGQIFERTAIEKWLADGNK LCPLTKKHLKKSDLRSNKTLRQSIEEWKNRNIMITIASLKLKIQTDKEEEVLQSLQKLSE FCVRSELQREWIVMENYVPVTIDLLRANNTEIRKYALLILYALAKDSEEGKERIGTVDNA IGLVVRSLARKPEESILALHLLLELSRSSVVQNLIGNVQGCILLLVTFMNSEDSVAAKYA SEILDNLSFLDQNVIEMARLNYGAPLLQHLCSGTESKRILMAKTLSHIQLSDQIKLHITE KGALKPLLELLSHSNTEMKIIAVKALQSLSTVPRNGQLMIKAGVSDQLFELLFCHTLSTE IRENVAATIMQLAISKNSQGSEDVQVSLLESHDDIFKLFSLISLTGSNVQQSILRIFQAM CQSPAGSDIRTKLRQISAIKVLVYLCEVDDHEVRADAVKLFYLLAKDGNDDILLEHVNNT CIGNLVGIIRTSDNEEEIAAALGIISHLPQDFSMSQHLLDAGALDVILDCLHGRNAHSSL RNEIVENAAGALCRFTVPTNPETQTQVAEAGIIPLLVSLLASGSCLTKKNAATSLKQFSE SSQKLSKQPASKIWMFSCCIASPTQNCPVHLGFCSVESSFCLLEANALRPLAEVVDEPDP AAAEASIDAILTIIEGEQLQNGSKVLAEANAIAPIIKLLSSSSIILQEKALKALERLFQM IELKLKYGTSAQMPLVEITQKGRSDLKSLAAKVLSHLNVLPEQSSFF*

Transcript Sequence

Transcript ID	Solyc03g082690.3.1
Transcript Infomation	U-box domain-containing protein 43 (AHRD V3.3 *** W9S1U9_9ROSA)
Sequence	TTTGGCGGAAGGGCTAAAGTTTGGCTACCTAATGAGCTAGCATAAAGGAGGATCAAGGGA TTTGGCTTTTTCTTTTGCCTTCCTTAGAGTGATATCATGCCAGAGGATCCATCTACCGAT GTTTCTCTTGTCCCAGCTTCAGAAGTTGTCACTGGCATAACTCGACTTGTATTTGAAACA ATAGAGGCTGCAAATTCTGCTGTTGTGCAGAAGGAGAACTTCAATAAATTTTCAAAATTC TTGGAGAAGATTGCTTTGGTCCTGAAAGAGTTATCTAATTCTGAAACTAGTGAAATTAAT AACTTAAGTCCAGCTTTAGAGGTTCTCAAGTTGGAGATAGAAGTGATCAAACAACTAGCT TTGGACTGCAGAAATAGGAACAAAATCTATCTCTTACTAAATTGTAGGAGAACCCTCAAG TATTTTGAGTGTAGTACGAGGGATATTAGTCGGACTTTGTTGCTAATAACTTCGGAATAT CTGAATGTTTTACCTGAAATCACTGACCAGCTTAAAGATCTATGCAAGAACATGCTGGAT ACTGAGTATAAAGTCTCTATAGAGGAGGAAGAAGTTTCGGAGAAAATTGAATTAGGGATA CAAGAGAGGAATATTGATAGATCCTATGCAAATGATTTGCTCATTTGTATTGCTAGAGCT GTTGGAATAGCAAATGAGCAATCAGTACTGAAGAGAGAATTTGGAAATTTCAAGGCAGAA ATTGCTAGTAGTGAACAAGGGAAGAACCTGACGGAGAAATTACGGATGGAAGAGATTATT CTATTGCTTGGCAAGGCTGACTTGCTTACAACTGCAGAAGAAAAACAAACAAATTATTTG ACTAAAAGAAACTCTTTGGGTAGGCAACCATTAGAACCTTTGCAGTCATTTTACTGCCCA ATTACTGGAGATGTCATGGAAGATCCGGTGGAGACTTCTTCTGGGCAGATATTTGAAAGG ACAGCTATCGAGAAGTGGTTAGCAGACGGCAATAAGCTGTGTCCCTTGACCAAAAAACAC TTGAAAAAGTCAGATCTTCGGTCCAATAAAACCCTGCGTCAGTCAATTGAAGAATGGAAA AACAGAAACATCATGATCACCATTGCGTCTCTAAAACTGAAAATTCAAACAGACAAAGAG GAAGAAGTGCTTCAATCTTTACAGAAGTTGTCGGAGTTTTGTGTAAGGAGTGAGTTGCAG AGAGAATGGATCGTGATGGAAAATTACGTACCAGTTACCATAGATCTTCTACGTGCAAAT AATACTGAGATAAGAAAGTATGCTTTATTGATACTTTACGCTCTCGCAAAGGATAGTGAA GAAGGCAAGGAAAGAATAGGTACAGTAGATAATGCTATTGGTTTGGTGGTGCGATCTCTT GCACGCAAACCTGAAGAAAGCATATTGGCTTTGCATCTGCTTTTGGAGCTATCCAGAAGT AGTGTAGTTCAGAACTTGATTGGCAATGTCCAGGGTTGCATCCTTCTACTTGTTACTTTC ATGAATAGTGAGGACTCTGTAGCAGCAAAGTATGCTAGTGAAATTTTGGACAATCTCTCG TTCCTTGATCAGAATGTTATTGAGATGGCAAGATTAAATTATGGTGCACCCTTACTACAA CATCTATGTTCAGGAACTGAAAGTAAGCGTATTCTCATGGCCAAAACCTTGTCACACATC CAGTTGAGCGACCAGATTAAGCTGCACATCACAGAAAAAGGGGCACTGAAGCCACTTCTT GAACTGCTATCGCATAGCAATACAGAGATGAAAATCATTGCTGTCAAAGCACTCCAAAGC CTTTCAACTGTCCCAAGAAATGGTCAATTGATGATAAAGGCAGGTGTCAGTGACCAGCTG TTTGAACTACTATTTTGTCACACCTTGTCAACAGAAATACGGGAAAATGTAGCAGCAACA ATTATGCAACTTGCCATATCAAAAAATTCTCAAGGATCAGAGGATGTGCAGGTTTCATTG TTGGAGTCTCATGATGACATCTTTAAACTCTTTTCTCTTATATCGTTGACTGGATCTAAT GTGCAACAAAGCATTCTTCGTATCTTTCAAGCAATGTGCCAATCTCCTGCTGGTTCTGAT ATCCGGACCAAACTGAGACAGATTTCTGCAATTAAGGTCCTAGTCTACCTGTGTGAGGTT GATGACCATGAGGTACGGGCTGATGCGGTGAAACTCTTCTATTTATTGGCAAAAGACGGT AATGATGATATTCTCTTAGAGCATGTAAACAATACATGCATTGGGAACTTGGTAGGGATC ATCAGAACTTCAGATAATGAAGAAGAGATTGCTGCTGCATTGGGAATAATCTCTCATCTT CCTCAAGATTTTTCAATGTCCCAGCACCTTCTTGATGCTGGGGCACTTGATGTCATCTTA GACTGTCTGCATGGTAGAAATGCCCATTCTTCACTAAGAAATGAAATTGTAGAGAATGCT GCTGGAGCCCTTTGCCGTTTTACTGTTCCAACAAATCCAGAAACACAAACACAAGTTGCT GAAGCCGGTATTATTCCTCTTCTAGTATCCCTTCTAGCATCAGGCAGTTGTTTAACCAAA AAAAATGCAGCTACTTCTTTAAAGCAGTTTTCAGAAAGCTCACAAAAGCTGAGCAAGCAG CCAGCTAGTAAAATTTGGATGTTTAGTTGCTGTATCGCCTCACCGACACAAAACTGTCCC GTGCACCTAGGATTTTGCAGTGTGGAATCCTCATTCTGCCTTTTAGAGGCTAATGCTCTC AGACCCCTCGCGGAGGTGGTAGATGAGCCAGATCCTGCAGCTGCTGAAGCTTCTATAGAT GCAATCTTGACAATAATTGAAGGTGAGCAGCTGCAGAATGGTTCTAAGGTACTTGCAGAA GCCAACGCCATCGCTCCAATCATAAAATTGTTGAGCTCATCCTCTATCATTTTACAAGAA AAAGCTCTCAAGGCCTTGGAGAGGCTATTTCAAATGATAGAATTGAAGCTCAAGTATGGG ACATCAGCCCAGATGCCACTTGTGGAAATCACTCAGAAAGGAAGAAGTGACTTGAAATCT TTAGCTGCTAAAGTTCTATCTCACTTGAATGTGCTTCCTGAACAGTCTTCCTTTTTCTAA CGGCCGCATCTACACTGAAGCATAGCACATTTCATACCGTTGATTTTTAGTATCTCGATC TGTTTAATACACACATTTTTTGAATGGGATCTGTCAATTATGAATCTTAGTCTTTCATAT GTAAACTGCCTCGTGGTGTAAAAACAAATTTGAAGATCAATGAGTAATTGTCATGTACTG TTTCAATATACCAATTTAT