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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g082630.3.1
CDS Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT5G53540.1)
Sequence

ATGAAGAGACGTTCATCGGAGACGAAGTTGTTGAAAGAATTGTTACTCTATGCGGCCAGC
GCCGCTTTGAGCAGCCTTGTTTTGTTTGTGGGGCTCCGACAACTTGACCCGAATCGACAA
GCTTCCAAAAAGGCTCTTGAGAACAAGAAGGAACTTGCGAAGCGCCTTGGTAGACCTATC
ATTCAAACCAATTCCTATGAGGATGTAATAGCCTGTGATGTAATCAACCCTGATCATATA
GATGTAGAATTTGATTCCATTGGTGGATTGGAATCTATTAAGCAAGCTCTATTTGAATTG
GTAATTCTTCCCTTGAAAAGGCCTGAACTCTTTTATGGGAAGCTTCTGGGTCCTCAAAAA
GGAGTTCTGCTCTATGGACCCCCTGGAACTGGAAAGACTATGCTTGCCAAAGCAATTGCT
AAGGAATCAAGTGCTGTTTTTATTAATGTGAGAACATCGAATTTGATGAGCAAATGGTTT
GGTGATGCCCAAAAACTCGTTGCTGCAGTGTTCAGTTTGGCACATAAACTTCAGCCAGCT
ATTATATTCATTGACGAAGTGGATAGCTTTTTGGGTCAGCGCAAGTCTACTGACAATGAG
GCGTCAACAAACATGAAGACTGAATTCATGGCTTTATGGGATGGTTTTACCACAGATCAA
AATGCACGAGTTATGGTCCTTGCTGCTACTAATCAACCATCTGAGCTTGATGAAGCAATT
CTTCGACGTCTTCCTCAAGCCTTTGAGATTGGAATGCCTAACTGCAGAGAAAGAGCTGAG
ATTTTGAAGGTGATCCTGAGAGGCGAGAAGGTAGAAGATACCATCGACTATGACGGCATT
GCTAGTCTCTGTGATGGATACACTGGTTCTGATCTTCTTGAGCTATGTAAAAAAGCTGCC
TACTTCCCCATCCGGGACTTGCTTAATGATGAGAAGAGTGGAAAGCGAACTGCGGAGCCG
AGGCCGCTGTTGGAATCGGATTTGGAAAAGGTTTTAACTACGTCAAAAAAGACAAAGGTT
GCTGCAAGTGAATACAGCAGGTTAAGTTCAATGCGTGCAGATTCAGATTCTGCAATTAAC
GAGATTTCTAAGCTTGTGGCTTCCCATATTCTGAATGTCCAGTCAGATAACTAG

Peptide Sequence

PEP ID

Solyc03g082630.3.1
PEP Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT5G53540.1)
Sequence

MKRRSSETKLLKELLLYAASAALSSLVLFVGLRQLDPNRQASKKALENKKELAKRLGRPI
IQTNSYEDVIACDVINPDHIDVEFDSIGGLESIKQALFELVILPLKRPELFYGKLLGPQK
GVLLYGPPGTGKTMLAKAIAKESSAVFINVRTSNLMSKWFGDAQKLVAAVFSLAHKLQPA
IIFIDEVDSFLGQRKSTDNEASTNMKTEFMALWDGFTTDQNARVMVLAATNQPSELDEAI
LRRLPQAFEIGMPNCRERAEILKVILRGEKVEDTIDYDGIASLCDGYTGSDLLELCKKAA
YFPIRDLLNDEKSGKRTAEPRPLLESDLEKVLTTSKKTKVAASEYSRLSSMRADSDSAIN
EISKLVASHILNVQSDN*

Transcript Sequence

Transcript ID

Solyc03g082630.3.1
Transcript Infomation

P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT5G53540.1)
Sequence

ATTATGGAATATTATTTTCGACCGCTAGAACGAAACCCATTCTTACCACAAGCTTTTAAT
ATTATGGCCGTGATCTGTCATTACGTGTGACTATCTCCACTATAGAAAGAAAAAAGAAAA
ATATAGTAAAGTAACTACTAAAACCAAATAGGTCAATAAAATTCTCCCAGTGACTGACGA
CTCGTGAGTTTGCAGGGCTCATAGGATGGAGAAAATCCCTCTCTTCATTCAATTATTTCA
TTGACGAGTTTTCACGATGTAAGTCAGTTGAAAATGAAGAAAAATTATTATATGAATGTT
AATCAGGGTGGGTCGAGGCGAATTAAAAATTTTATGGGATAAATTATGCATATAAATTGA
GAGTTTGAATTATGAAGTGGCAAGTTAATAAAGCAGTTATTCTGCGAGTCAAATTGATTC
TTGTGAGAAATAAACCCTAAAAAATTGAAACACTTAGATGGATGCGAAACTTTGCTTGTT
TGAAACGCCATTGTAGTGAGAAGAAAGATGAAGAGACGTTCATCGGAGACGAAGTTGTTG
AAAGAATTGTTACTCTATGCGGCCAGCGCCGCTTTGAGCAGCCTTGTTTTGTTTGTGGGG
CTCCGACAACTTGACCCGAATCGACAAGCTTCCAAAAAGGCTCTTGAGAACAAGAAGGAA
CTTGCGAAGCGCCTTGGTAGACCTATCATTCAAACCAATTCCTATGAGGATGTAATAGCC
TGTGATGTAATCAACCCTGATCATATAGATGTAGAATTTGATTCCATTGGTGGATTGGAA
TCTATTAAGCAAGCTCTATTTGAATTGGTAATTCTTCCCTTGAAAAGGCCTGAACTCTTT
TATGGGAAGCTTCTGGGTCCTCAAAAAGGAGTTCTGCTCTATGGACCCCCTGGAACTGGA
AAGACTATGCTTGCCAAAGCAATTGCTAAGGAATCAAGTGCTGTTTTTATTAATGTGAGA
ACATCGAATTTGATGAGCAAATGGTTTGGTGATGCCCAAAAACTCGTTGCTGCAGTGTTC
AGTTTGGCACATAAACTTCAGCCAGCTATTATATTCATTGACGAAGTGGATAGCTTTTTG
GGTCAGCGCAAGTCTACTGACAATGAGGCGTCAACAAACATGAAGACTGAATTCATGGCT
TTATGGGATGGTTTTACCACAGATCAAAATGCACGAGTTATGGTCCTTGCTGCTACTAAT
CAACCATCTGAGCTTGATGAAGCAATTCTTCGACGTCTTCCTCAAGCCTTTGAGATTGGA
ATGCCTAACTGCAGAGAAAGAGCTGAGATTTTGAAGGTGATCCTGAGAGGCGAGAAGGTA
GAAGATACCATCGACTATGACGGCATTGCTAGTCTCTGTGATGGATACACTGGTTCTGAT
CTTCTTGAGCTATGTAAAAAAGCTGCCTACTTCCCCATCCGGGACTTGCTTAATGATGAG
AAGAGTGGAAAGCGAACTGCGGAGCCGAGGCCGCTGTTGGAATCGGATTTGGAAAAGGTT
TTAACTACGTCAAAAAAGACAAAGGTTGCTGCAAGTGAATACAGCAGGTTAAGTTCAATG
CGTGCAGATTCAGATTCTGCAATTAACGAGATTTCTAAGCTTGTGGCTTCCCATATTCTG
AATGTCCAGTCAGATAACTAGGATTCTTAATCAGCTATTTGATTTCCTATAAATCATCTA
AAGTTTGATTTTTTTTCATTTTTGGTGGTTATTGTGGATGTTGCAGAATTCCTTTAGACC
ACTGTAGTTCAGCTATTAACTTGTAAGAGCATTGCATGATTTTCACGGCATAGTGGTTAA
AAATGACATCCTGGGTGGTAGAGTAACATGTTTCATTTTGTTTAATTGGCTTGGCGTTGT
GAAGTTGCATGCATATATGTGAAATTACAATATTTGTTTTCTTTATATAAAGGAGAAGAA
TAGTTGATCAGAACTTAGCTGTAATTTGGAATAGCATT